ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95f09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 541 bits (273), Expect = e-151 Identities = 324/341 (95%) Strand = Plus / Minus Query: 60 ttattattcgtggagcacgagcatggggcaaccaaatggccgcagccgacctaggcgatg 119 |||||||||||||| |||||||| ||||||| ||||| |||||| ||||||||||||||| Sbjct: 2667 ttattattcgtggaccacgagcacggggcaatcaaatagccgcaaccgacctaggcgatg 2608 Query: 120 tagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 179 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 2607 tagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 2548 Query: 180 ctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttcctc 239 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 2547 ctccactggtcgccgatgttgccgacgatgacgtacccggcatcctccagcttcttcctc 2488 Query: 240 tcggcggacttgtaggatatggcggagcccttgaatccgtgctgcttgagcgtcaggttc 299 ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| || Sbjct: 2487 tcggcggacttgtaggatatggcggagcccttgaacccatgttgcttgagcgtcaggctc 2428 Query: 300 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctcc 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2427 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttatcctcc 2368 Query: 360 gtccggcctgtgatgaacaccggcttgatgcccaccttgag 400 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2367 gtccggcctgtgatgaataccggcttgatgcccaccttgag 2327
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 541 bits (273), Expect = e-151 Identities = 324/341 (95%) Strand = Plus / Minus Query: 60 ttattattcgtggagcacgagcatggggcaaccaaatggccgcagccgacctaggcgatg 119 |||||||||||||| |||||||| ||||||| ||||| |||||| ||||||||||||||| Sbjct: 1071 ttattattcgtggaccacgagcacggggcaatcaaatagccgcaaccgacctaggcgatg 1012 Query: 120 tagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 179 ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1011 tagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgccgaggatgtcg 952 Query: 180 ctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttcctc 239 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 951 ctccactggtcgccgatgttgccgacgatgacgtacccggcatcctccagcttcttcctc 892 Query: 240 tcggcggacttgtaggatatggcggagcccttgaatccgtgctgcttgagcgtcaggttc 299 ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| || Sbjct: 891 tcggcggacttgtaggatatggcggagcccttgaacccatgttgcttgagcgtcaggctc 832 Query: 300 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctcc 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 831 atccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttatcctcc 772 Query: 360 gtccggcctgtgatgaacaccggcttgatgcccaccttgag 400 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 771 gtccggcctgtgatgaataccggcttgatgcccaccttgag 731
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 256 bits (129), Expect = 5e-65 Identities = 240/277 (86%) Strand = Plus / Minus Query: 117 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 176 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 535 atgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccgaggatg 476 Query: 177 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 236 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 475 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagcttctgg 416 Query: 237 ctctcggcggacttgtaggatatggcggagcccttgaatccgtgctgcttgagcgtcagg 296 | |||| |||||||||||| ||||||| | |||||| ||| |||||||| ||| Sbjct: 415 cgctcgccggacttgtaggcgatggcggtggccttgaggccgacgggcttgagcagcagc 356 Query: 297 ttcatccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcc 356 ||||||| |||||| | ||||||| ||||||||| |||||||| |||||||| |||| Sbjct: 355 gtcatccagccggagtacccctggcggcggaggttggtgacggtgatggccctctggtcc 296 Query: 357 tccgtccggcctgtgatgaacaccggcttgatgccca 393 || || ||||| || | |||||||||||||||||||| Sbjct: 295 tcggtgcggcccgtcaggaacaccggcttgatgccca 259
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 117 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 176 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279 Query: 177 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 236 || ||||||||||| |||||||| |||||||||| | | || |||||||||||||||| | Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339 Query: 237 ctctcggcggacttgta 253 | |||| |||||||||| Sbjct: 80340 cgctcgccggacttgta 80356 Score = 143 bits (72), Expect = 5e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 89813 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 89872 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||||||||||||||| |||||||| ||||||||| | | ||||| |||| | Sbjct: 89873 ccgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcc 89932 Query: 228 agcttcttcctctcggcggacttg 251 ||||||| || |||| |||||||| Sbjct: 89933 agcttctgccgctcgccggacttg 89956 Score = 135 bits (68), Expect = 1e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 90312 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 90371 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||||||||||||||| |||||||| ||||| ||| | | ||||| |||| | Sbjct: 90372 ccgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcc 90431 Query: 228 agcttcttcctctcggcggacttg 251 ||||||| || |||| |||||||| Sbjct: 90432 agcttctgccgctcgccggacttg 90455 Score = 99.6 bits (50), Expect = 7e-18 Identities = 122/146 (83%) Strand = Plus / Plus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct: 104197 acctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgta 104256 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||| ||||| ||||| || ||||| |||| |||| | | ||||| |||| | Sbjct: 104257 ccgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcc 104316 Query: 228 agcttcttcctctcggcggacttgta 253 ||||| | || |||| |||||||||| Sbjct: 104317 agcttttgccgctcgccggacttgta 104342 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 302 ccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctccgt 361 |||||||||||| ||||| | | |||||||| |||||||| || ||| | ||| || || Sbjct: 80420 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtcttcggt 80479 Query: 362 ccggcctgtgatgaacaccggcttga 387 |||||||| | |||||||||||||| Sbjct: 80480 gcggcctgttaggaacaccggcttga 80505 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 5477 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 5530 Score = 42.1 bits (21), Expect = 1.4 Identities = 72/89 (80%) Strand = Plus / Plus Query: 299 catccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctc 358 ||||||||||||| | ||||| | ||||||||| |||||||| | ||| | |||||| Sbjct: 104403 catccacccggagtatccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 104462 Query: 359 cgtccggcctgtgatgaacaccggcttga 387 || ||||| || | |||||||||||||| Sbjct: 104463 ggtgcggcccgtcaggaacaccggcttga 104491 Score = 42.1 bits (21), Expect = 1.4 Identities = 84/105 (80%) Strand = Plus / Plus Query: 283 gcttgagcgtcaggttcatccacccggagaagccctggctgcggaggttcccgacggtga 342 |||||||| ||| ||||||||||||||| | ||||| | ||| ||||| |||||||| Sbjct: 90502 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 90561 Query: 343 cggccctcttgtcctccgtccggcctgtgatgaacaccggcttga 387 | ||| | |||||| || |||| ||| | |||||||||||||| Sbjct: 90562 tgttcctttcgtcctcggtgcggcttgtcaagaacaccggcttga 90606
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 117 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 176 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070 Query: 177 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 236 || ||||||||||| |||||||| |||||||||| | | || |||||||||||||||| | Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130 Query: 237 ctctcggcggacttgta 253 | |||| |||||||||| Sbjct: 5547131 cgctcgccggacttgta 5547147 Score = 143 bits (72), Expect = 5e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 5556604 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 5556663 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||||||||||||||| |||||||| ||||||||| | | ||||| |||| | Sbjct: 5556664 ccgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcc 5556723 Query: 228 agcttcttcctctcggcggacttg 251 ||||||| || |||| |||||||| Sbjct: 5556724 agcttctgccgctcgccggacttg 5556747 Score = 135 bits (68), Expect = 1e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| | ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 5557103 acctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgca 5557162 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||||||||||||||| |||||||| ||||| ||| | | ||||| |||| | Sbjct: 5557163 ccgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcc 5557222 Query: 228 agcttcttcctctcggcggacttg 251 ||||||| || |||| |||||||| Sbjct: 5557223 agcttctgccgctcgccggacttg 5557246 Score = 99.6 bits (50), Expect = 7e-18 Identities = 122/146 (83%) Strand = Plus / Plus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct: 5570988 acctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgta 5571047 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||| ||||| ||||| || ||||| |||| |||| | | ||||| |||| | Sbjct: 5571048 ccgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcc 5571107 Query: 228 agcttcttcctctcggcggacttgta 253 ||||| | || |||| |||||||||| Sbjct: 5571108 agcttttgccgctcgccggacttgta 5571133 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 110 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 169 |||||||| |||||| ||||||| ||| ||||||| ||||| |||||| ||| | || Sbjct: 5459667 ctaggcgacgtagtacatggggttagggtacttgaagatgcgacagccctctggccctcc 5459726 Query: 170 gaggatgtcgctccactggtcgccgatgttgcc 202 |||||||| |||||||||||| ||||||||||| Sbjct: 5459727 gaggatgttgctccactggtcaccgatgttgcc 5459759 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 170 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 229 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 5452408 Query: 230 cttcttcc 237 |||||||| Sbjct: 5452409 cttcttcc 5452416 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 138 agcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccgatg 197 |||||||||||||| || ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454 Query: 198 ttgccgac 205 || ||||| Sbjct: 5399455 ttaccgac 5399462 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 5416642 ggatgtcgttccactggtcgccaatgttgccgacgatga 5416680 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 302 ccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctccgt 361 |||||||||||| ||||| | | |||||||| |||||||| || ||| | ||| || || Sbjct: 5547211 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtcttcggt 5547270 Query: 362 ccggcctgtgatgaacaccggcttga 387 |||||||| | |||||||||||||| Sbjct: 5547271 gcggcctgttaggaacaccggcttga 5547296 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 5472268 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 5472321 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 176 gtcgctccactggtcgccgatgttgccga 204 ||||||||||||||| ||||||||||||| Sbjct: 5428951 gtcgctccactggtcaccgatgttgccga 5428979 Score = 42.1 bits (21), Expect = 1.4 Identities = 72/89 (80%) Strand = Plus / Plus Query: 299 catccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctc 358 ||||||||||||| | ||||| | ||||||||| |||||||| | ||| | |||||| Sbjct: 5571194 catccacccggagtatccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 5571253 Query: 359 cgtccggcctgtgatgaacaccggcttga 387 || ||||| || | |||||||||||||| Sbjct: 5571254 ggtgcggcccgtcaggaacaccggcttga 5571282 Score = 42.1 bits (21), Expect = 1.4 Identities = 84/105 (80%) Strand = Plus / Plus Query: 283 gcttgagcgtcaggttcatccacccggagaagccctggctgcggaggttcccgacggtga 342 |||||||| ||| ||||||||||||||| | ||||| | ||| ||||| |||||||| Sbjct: 5557293 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 5557352 Query: 343 cggccctcttgtcctccgtccggcctgtgatgaacaccggcttga 387 | ||| | |||||| || |||| ||| | |||||||||||||| Sbjct: 5557353 tgttcctttcgtcctcggtgcggcttgtcaagaacaccggcttga 5557397
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 161 bits (81), Expect = 2e-36 Identities = 123/137 (89%) Strand = Plus / Minus Query: 117 atgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatg 176 |||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844 Query: 177 tcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcagcttcttc 236 || ||||||||||| |||||||| |||||||||| | | || |||||||||||||||| | Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784 Query: 237 ctctcggcggacttgta 253 | |||| |||||||||| Sbjct: 783 cgctcgccggacttgta 767 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Minus Query: 302 ccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctccgt 361 |||||||||||| ||||| | | |||||||| |||||||| || ||| | ||| || || Sbjct: 703 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtcttcggt 644 Query: 362 ccggcctgtgatgaacaccggcttga 387 |||||||| | |||||||||||||| Sbjct: 643 gcggcctgttaggaacaccggcttga 618
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 159 bits (80), Expect = 8e-36 Identities = 131/148 (88%) Strand = Plus / Minus Query: 106 cgacctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcg 165 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 16055856 cgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtg 16055797 Query: 166 cgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcct 225 | || | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||| Sbjct: 16055796 cacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcct 16055737 Query: 226 gcagcttcttcctctcggcggacttgta 253 ||||||||| | |||| |||||||||| Sbjct: 16055736 gcagcttctgacgctcgccggacttgta 16055709
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 159 bits (80), Expect = 8e-36 Identities = 131/148 (88%) Strand = Plus / Minus Query: 106 cgacctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcg 165 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 26189 cgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtg 26130 Query: 166 cgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcct 225 | || | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||| Sbjct: 26129 cacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcct 26070 Query: 226 gcagcttcttcctctcggcggacttgta 253 ||||||||| | |||| |||||||||| Sbjct: 26069 gcagcttctgacgctcgccggacttgta 26042
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 159 bits (80), Expect = 8e-36 Identities = 131/148 (88%) Strand = Plus / Minus Query: 106 cgacctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcg 165 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 137258 cgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtg 137199 Query: 166 cgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcct 225 | || | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||| Sbjct: 137198 cacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcct 137139 Query: 226 gcagcttcttcctctcggcggacttgta 253 ||||||||| | |||| |||||||||| Sbjct: 137138 gcagcttctgacgctcgccggacttgta 137111
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 151 bits (76), Expect = 2e-33 Identities = 127/144 (88%) Strand = Plus / Minus Query: 110 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 169 |||| |||||||||| ||||||||||||||||||||||||||||||||||| || || || Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352 Query: 170 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 229 | |||||| ||||||||||| |||||||| |||||||||| | | |||||||||||||| Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292 Query: 230 cttcttcctctcggcggacttgta 253 ||||| | |||| |||||||||| Sbjct: 291 cttctgacgctcgccggacttgta 268
>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full insert sequence Length = 1112 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 751 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 692 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 691 gccggcgtcc 682
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 99.6 bits (50), Expect = 7e-18 Identities = 122/146 (83%) Strand = Plus / Minus Query: 108 acctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcg 167 |||||| |||||||||| |||||||| ||||||||||||||||| |||||||| || | Sbjct: 886 acctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgta 827 Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgc 227 ||||||||||| ||||| ||||| || ||||| |||| |||| | | ||||| |||| | Sbjct: 826 ccgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcc 767 Query: 228 agcttcttcctctcggcggacttgta 253 ||||| | || |||| |||||||||| Sbjct: 766 agcttttgccgctcgccggacttgta 741 Score = 42.1 bits (21), Expect = 1.4 Identities = 72/89 (80%) Strand = Plus / Minus Query: 299 catccacccggagaagccctggctgcggaggttcccgacggtgacggccctcttgtcctc 358 ||||||||||||| | ||||| | ||||||||| |||||||| | ||| | |||||| Sbjct: 680 catccacccggagtatccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 621 Query: 359 cgtccggcctgtgatgaacaccggcttga 387 || ||||| || | |||||||||||||| Sbjct: 620 ggtgcggcccgtcaggaacaccggcttga 592
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 32794 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 32853 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 32854 gccggcgtcc 32863 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 110 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 169 |||||||| |||||| ||||||| ||| ||||||| ||||| |||||| ||| | || Sbjct: 13998 ctaggcgacgtagtacatggggttagggtacttgaagatgcgacagccctctggccctcc 14057 Query: 170 gaggatgtcgctccactggtcgccgatgttgcc 202 |||||||| |||||||||||| ||||||||||| Sbjct: 14058 gaggatgttgctccactggtcaccgatgttgcc 14090 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 170 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 229 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 6739 Query: 230 cttcttcc 237 |||||||| Sbjct: 6740 cttcttcc 6747
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 99.6 bits (50), Expect = 7e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 155 gccctcgggcgcgccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgta 214 |||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 6414 gccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacata 6473 Query: 215 cccggcgtcc 224 ||||||||| Sbjct: 6474 gccggcgtcc 6483 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 25708 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 25761
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 110 ctaggcgatgtagtaaatggggtcaggcagcttgaaggtgcgagcgccctcgggcgcgcc 169 |||||||| |||||| ||||||| ||| ||||||| ||||| |||||| ||| | || Sbjct: 146341 ctaggcgacgtagtacatggggttagggtacttgaagatgcgacagccctctggccctcc 146400 Query: 170 gaggatgtcgctccactggtcgccgatgttgcc 202 |||||||| |||||||||||| ||||||||||| Sbjct: 146401 gaggatgttgctccactggtcaccgatgttgcc 146433 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 170 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 229 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 139082 Query: 230 cttcttcc 237 |||||||| Sbjct: 139083 cttcttcc 139090 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 138 agcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccgatg 197 |||||||||||||| || ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128 Query: 198 ttgccgac 205 || ||||| Sbjct: 86129 ttaccgac 86136 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 103316 ggatgtcgttccactggtcgccaatgttgccgacgatga 103354 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 176 gtcgctccactggtcgccgatgttgccga 204 ||||||||||||||| ||||||||||||| Sbjct: 115625 gtcgctccactggtcaccgatgttgccga 115653
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 815 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 756 Query: 195 atgttgccga 204 |||||||||| Sbjct: 755 atgttgccga 746
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 4871437 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 4871496 Query: 195 atgttgccga 204 |||||||||| Sbjct: 4871497 atgttgccga 4871506
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 116086 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 116145 Query: 195 atgttgccga 204 |||||||||| Sbjct: 116146 atgttgccga 116155
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 195 atgttgccga 204 |||||||||| Sbjct: 778 atgttgccga 769
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 837 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 778 Query: 195 atgttgccga 204 |||||||||| Sbjct: 777 atgttgccga 768
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 195 atgttgccga 204 |||||||||| Sbjct: 778 atgttgccga 769
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 1051 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 992 Query: 195 atgttgccga 204 |||||||||| Sbjct: 991 atgttgccga 982
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 195 atgttgccga 204 |||||||||| Sbjct: 778 atgttgccga 769
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 135 ggcagcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccg 194 |||||||||||||| || |||||| |||| ||| || | ||||||||||||||||||| Sbjct: 838 ggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactggtcgccg 779 Query: 195 atgttgccga 204 |||||||||| Sbjct: 778 atgttgccga 769
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 138 agcttgaaggtgcgagcgccctcgggcgcgccgaggatgtcgctccactggtcgccgatg 197 |||||||||||||| || ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968 Query: 198 ttgccgac 205 || ||||| Sbjct: 84969 ttaccgac 84976 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 102156 ggatgtcgttccactggtcgccaatgttgccgacgatga 102194
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 170 gaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctgcag 229 ||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||| || Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggcatccactag 701 Query: 230 cttcttcc 237 |||||||| Sbjct: 700 cttcttcc 693
>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full insert sequence Length = 1051 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 742 ggatgtcgttccactggtcgccaatgttgccgacgatga 704
>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full insert sequence Length = 1053 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 744 ggatgtcgttccactggtcgccaatgttgccgacgatga 706
>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full insert sequence Length = 1059 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 750 ggatgtcgttccactggtcgccaatgttgccgacgatga 712
>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full insert sequence Length = 1074 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 172 ggatgtcgctccactggtcgccgatgttgccgacgatga 210 |||||||| ||||||||||||| |||||||||||||||| Sbjct: 743 ggatgtcgttccactggtcgccaatgttgccgacgatga 705
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 168 ccgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcg 221 |||||||| |||||||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 338 ggtgacggccctcttgtcctccgtccggcctgtgatgaacaccggcttgatgcc 391 |||||||||||||| |||||| || ||| | || | |||||||||||||||||| Sbjct: 616 ggtgacggccctctggtcctcggtgcggtcggtcaggaacaccggcttgatgcc 563
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 gtcgctccactggtcgccgatgttgccg 203 |||||||||||||||||||| ||||||| Sbjct: 12244752 gtcgctccactggtcgccgacgttgccg 12244779
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 gtcgctccactggtcgccgatgttgccg 203 |||||||||||||||||||| ||||||| Sbjct: 12241515 gtcgctccactggtcgccgacgttgccg 12241542
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds Length = 2310 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Minus Query: 176 gtcgctccactggtcgccgatgttgccg 203 |||||||||||||||||||| ||||||| Sbjct: 94 gtcgctccactggtcgccgacgttgccg 67
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 48.1 bits (24), Expect = 0.022 Identities = 27/28 (96%) Strand = Plus / Plus Query: 176 gtcgctccactggtcgccgatgttgccg 203 |||||||||||||||||||| ||||||| Sbjct: 14285 gtcgctccactggtcgccgacgttgccg 14312
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Minus Query: 184 actggtcgccgatgttgccgacgatgacgtacccg 218 |||||||||||| |||| |||||||| |||||||| Sbjct: 7652446 actggtcgccgaagttggcgacgatgtcgtacccg 7652412
>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Minus Query: 167 gccgaggatgtcgctccactggtcgccgatgttg 200 ||||| || ||||||||||||| ||||||||||| Sbjct: 696 gccgaagaagtcgctccactgggcgccgatgttg 663
>ref|XM_507001.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1353_F08.16-1 mRNA Length = 1411 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 741 ctggtcgccgatgttggcgacgatg 717
>ref|XM_468017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1316 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 750 ctggtcgccgatgttggcgacgatg 726
>emb|AL512452.7| Human DNA sequence from clone RP11-520F22 on chromosome 13, complete sequence Length = 141913 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 agcatggagcttgattattat 66 ||||||||||||||||||||| Sbjct: 19121 agcatggagcttgattattat 19141
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 actggtcgccgatgttgccgacgat 208 ||||||||||||| ||||||||||| Sbjct: 1102884 actggtcgccgatcttgccgacgat 1102908
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 32580474 ctggtcgccgatgttggcgacgatg 32580450
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 cctcgggcgcgccgaggatgt 177 ||||||||||||||||||||| Sbjct: 1107157 cctcgggcgcgccgaggatgt 1107137
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 7845 ctggtcgccgatgttggcgacgatg 7821
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 77447 ctggtcgccgatgttggcgacgatg 77423
>dbj|AK103969.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B02, full insert sequence Length = 1316 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 750 ctggtcgccgatgttggcgacgatg 726
>dbj|AK071557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099D13, full insert sequence Length = 1411 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 741 ctggtcgccgatgttggcgacgatg 717
>dbj|AK066805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078A14, full insert sequence Length = 3000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 2434 ctggtcgccgatgttggcgacgatg 2410
>gb|AF079589.1|AF079589 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, partial cds Length = 876 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 297 ctggtcgccgatgttgacgacgatg 273
>gb|AF049889.1|AF049889 Oryza sativa 1-aminocyclopropane-1-carboxylate oxidase (ACO2) mRNA, complete cds Length = 1299 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 185 ctggtcgccgatgttgccgacgatg 209 |||||||||||||||| |||||||| Sbjct: 733 ctggtcgccgatgttggcgacgatg 709
>emb|AL049761.11|HSDJ863C7 Human DNA sequence from clone RP5-863C7 on chromosome 20p12.3-13 Contains the CSNK2A1 gene for casein kinase 2 alpha 1 polypeptide (EC 2.7.1.37), the 5' end of the C20orf140 gene for a novel protein similar to Drosophila CG17883 and a CpG island, complete sequence Length = 108653 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tggggtcaggcagcttgaag 146 |||||||||||||||||||| Sbjct: 105909 tggggtcaggcagcttgaag 105928
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgccctcgggcgcgccgagg 173 |||||||||||||||||||| Sbjct: 22180 cgccctcgggcgcgccgagg 22199
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgccctcgggcgcgccgagg 173 |||||||||||||||||||| Sbjct: 9689974 cgccctcgggcgcgccgagg 9689993
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tcctgcagcttcttcctctc 241 |||||||||||||||||||| Sbjct: 280157 tcctgcagcttcttcctctc 280176
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cggcgtcctgcagcttcttc 236 |||||||||||||||||||| Sbjct: 28643928 cggcgtcctgcagcttcttc 28643909
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 cgccctcgggcgcgccgagg 173 |||||||||||||||||||| Sbjct: 1123697 cgccctcgggcgcgccgagg 1123678
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cggcgtcctgcagcttcttc 236 |||||||||||||||||||| Sbjct: 135406 cggcgtcctgcagcttcttc 135387
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 cggcgtcctgcagcttcttc 236 |||||||||||||||||||| Sbjct: 44494 cggcgtcctgcagcttcttc 44475
>dbj|AK099132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051M04, full insert sequence Length = 3065 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tcctgcagcttcttcctctc 241 |||||||||||||||||||| Sbjct: 606 tcctgcagcttcttcctctc 587
>dbj|AK072914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150I16, full insert sequence Length = 3183 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tcctgcagcttcttcctctc 241 |||||||||||||||||||| Sbjct: 721 tcctgcagcttcttcctctc 702
>tpe|BN000621.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx92 gene for class III peroxidase 92 precursor, exons 1-3 Length = 1183 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 cggcgtcctgcagcttcttc 236 |||||||||||||||||||| Sbjct: 825 cggcgtcctgcagcttcttc 844
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 gaacaccggcttgatgccca 393 |||||||||||||||||||| Sbjct: 2923973 gaacaccggcttgatgccca 2923992
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tcctgcagcttcttcctctc 241 |||||||||||||||||||| Sbjct: 280157 tcctgcagcttcttcctctc 280176
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccggcgtcctgcagcttctt 235 |||||||||||||||||||| Sbjct: 1980897 ccggcgtcctgcagcttctt 1980916
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tcctgcagcttcttcctctc 241 |||||||||||||||||||| Sbjct: 13208 tcctgcagcttcttcctctc 13227
>dbj|AP005020.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-486A21, complete sequences Length = 57000 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tagtaaatggggtcaggcag 139 |||||||||||||||||||| Sbjct: 40125 tagtaaatggggtcaggcag 40106 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,572,754 Number of Sequences: 3902068 Number of extensions: 2572754 Number of successful extensions: 44745 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44032 Number of HSP's gapped (non-prelim): 713 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
