ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477654.1| Oryza sativa (japonica cultivar-group), mRNA 125 1e-25
2gb|AY339367.1| Oryza sativa (japonica cultivar-group) putative p... 125 1e-25
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
4dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
5dbj|AK064867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 1e-25
6gb|AY107084.1| Zea mays PCO079799 mRNA sequence 60 6e-06
7emb|AJ132346.1|DBI132346 Dunaliella bioculata mRNA for plastidic... 52 0.001
8gb|BT018268.1| Zea mays clone EL01T0203B04.c mRNA sequence 46 0.086
9ref|XM_857866.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
10ref|XM_857838.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
11ref|XM_857817.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
12ref|XM_857792.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
13ref|XM_857773.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
14ref|XM_857752.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
15ref|XM_857727.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
16ref|XM_857703.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
17ref|XM_857678.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
18ref|XM_857656.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
19ref|XM_857628.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
20ref|XM_536963.2| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
21ref|XM_857578.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
22ref|XM_857554.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
23ref|XM_857531.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
24ref|XM_857511.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
25ref|XM_857488.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
26ref|XM_857461.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
27ref|XM_857438.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
28ref|XM_857414.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
29ref|XM_857386.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
30ref|XM_857361.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
31ref|XM_857335.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
32ref|XM_857303.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
33ref|XM_857275.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
34ref|XM_857247.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
35ref|XM_857226.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
36ref|XM_857198.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
37ref|XM_845671.1| PREDICTED: Canis familiaris similar to smooth m... 44 0.34
38ref|XM_524851.1| PREDICTED: Pan troglodytes similar to actin-rel... 42 1.3
39ref|NM_080431.4| Homo sapiens actin-related protein T2 (ACTRT2),... 42 1.3
40ref|XM_501776.1| Yarrowia lipolytica CLIB122, YALI0C12859g predi... 42 1.3
41emb|AL356984.13| Human DNA sequence from clone RP11-333E3 on chr... 42 1.3
42dbj|AB179451.1| Macaca fascicularis testis cDNA clone: QtsA-2032... 42 1.3
43gb|BC029499.1| Homo sapiens actin-related protein T2, mRNA (cDNA... 42 1.3
44emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.3
45gb|AF440740.1| Homo sapiens actin-related protein T2 (ACTRT2) mR... 42 1.3
46dbj|AB057364.1| Homo sapiens mRNA for actin-related protein hArp... 42 1.3
47gb|AC169122.1| Mus musculus BAC clone RP23-167K9 from chromosome... 40 5.3
48ref|XM_608513.2| PREDICTED: Bos taurus similar to smooth muscle ... 40 5.3
49ref|XM_368077.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 5.3
50ref|XM_801870.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.3
51emb|Z49889.1|CET06H11 Caenorhabditis elegans Cosmid T06H11, comp... 40 5.3
52ref|XM_815305.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.3
53gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, c... 40 5.3
54emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 40 5.3
55gb|AC025575.21| Homo sapiens 12 BAC RP11-934P3 (Roswell Park Can... 40 5.3
56ref|NM_077292.2| Caenorhabditis elegans W07E11.1 (W07E11.1) mRNA... 40 5.3
57gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complet... 40 5.3
58gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.3
59gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.3
60gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, comple... 40 5.3
61gb|AC169676.2| Mus musculus BAC clone RP24-163P20 from chromosom... 40 5.3 
>ref|XM_477654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2074

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                        
Query: 237  ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
            |||||||| ||||||||||||||||| |||||||| || || || || |||||||| || 
Sbjct: 1876 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 1817

                                                                        
Query: 297  taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaag 356
            || ||||| ||||| ||||| ||||||||||  |||||||||||||| | ||| ||||||
Sbjct: 1816 taagggtatagctcaggggctatccgcttctcttccagctccttgagtaagggagtgaag 1757

                               
Query: 357  agctcccatgcggcgtcca 375
            |||||||||||||| ||||
Sbjct: 1756 agctcccatgcggcatcca 1738
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>gb|AY339367.1| Oryza sativa (japonica cultivar-group) putative plastidic
            glucose-6-phosphate dehydrogenase (pG6PDH) mRNA, complete
            cds; nuclear gene for plastid product
          Length = 1768

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                        
Query: 237  ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
            |||||||| ||||||||||||||||| |||||||| || || || || |||||||| || 
Sbjct: 1740 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 1681

                                                                        
Query: 297  taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaag 356
            || ||||| ||||| ||||| ||||||||||  |||||||||||||| | ||| ||||||
Sbjct: 1680 taagggtatagctcaggggctatccgcttctcttccagctccttgagtaagggagtgaag 1621

                               
Query: 357  agctcccatgcggcgtcca 375
            |||||||||||||| ||||
Sbjct: 1620 agctcccatgcggcatcca 1602
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Plus

                                                                            
Query: 237      ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
                |||||||| ||||||||||||||||| |||||||| || || || || |||||||| || 
Sbjct: 12490968 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 12491027

                                                                            
Query: 297      taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaag 356
                || ||||| ||||| ||||| ||||||||||  |||||||||||||| | ||| ||||||
Sbjct: 12491028 taagggtatagctcaggggctatccgcttctcttccagctccttgagtaagggagtgaag 12491087

                                   
Query: 357      agctcccatgcggcgtcca 375
                |||||||||||||| ||||
Sbjct: 12491088 agctcccatgcggcatcca 12491106
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>dbj|AP005462.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0613B07
          Length = 191756

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Plus

                                                                          
Query: 237    ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
              |||||||| ||||||||||||||||| |||||||| || || || || |||||||| || 
Sbjct: 135250 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 135309

                                                                          
Query: 297    taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaag 356
              || ||||| ||||| ||||| ||||||||||  |||||||||||||| | ||| ||||||
Sbjct: 135310 taagggtatagctcaggggctatccgcttctcttccagctccttgagtaagggagtgaag 135369

                                 
Query: 357    agctcccatgcggcgtcca 375
              |||||||||||||| ||||
Sbjct: 135370 agctcccatgcggcatcca 135388
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>dbj|AK064867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I19, full
            insert sequence
          Length = 2074

 Score =  125 bits (63), Expect = 1e-25
 Identities = 120/139 (86%)
 Strand = Plus / Minus

                                                                        
Query: 237  ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
            |||||||| ||||||||||||||||| |||||||| || || || || |||||||| || 
Sbjct: 1876 ccccatctgacgttgtactttgctgcaaggtagtgagcccctacaggaccgcggcttcca 1817

                                                                        
Query: 297  taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaag 356
            || ||||| ||||| ||||| ||||||||||  |||||||||||||| | ||| ||||||
Sbjct: 1816 taagggtatagctcaggggctatccgcttctcttccagctccttgagtaagggagtgaag 1757

                               
Query: 357  agctcccatgcggcgtcca 375
            |||||||||||||| ||||
Sbjct: 1756 agctcccatgcggcatcca 1738
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>gb|AY107084.1| Zea mays PCO079799 mRNA sequence
          Length = 2167

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Minus

                                                                        
Query: 237  ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
            |||||||| ||||||||||| || || || ||||| || || || || || ||||| || 
Sbjct: 1834 ccccatcttacgttgtacttggcggcgagatagtgagccccgacaggtccacggcttcca 1775

                                                                        
Query: 297  taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaag 356
            || ||||| ||||| || || ||||||||||  ||||||||||| || ||||| ||||||
Sbjct: 1774 tatgggtagagctcaggagctatccgcttctcttccagctccttcaggaggggtgtgaag 1715

              
Query: 357  ag 358
            ||
Sbjct: 1714 ag 1713
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>emb|AJ132346.1|DBI132346 Dunaliella bioculata mRNA for plastidic glucose-6-phosphate
            dehydrogenase
          Length = 1924

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 245  cacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccgtaggggta 304
            |||||||||||| || |||| |||||| || ||||| || || | ||| |||||||||||
Sbjct: 1807 cacgttgtacttggcagccaagtagtgtgcccccacagggcctctgctgccgtaggggta 1748

                  
Query: 305  cagctc 310
            ||||||
Sbjct: 1747 cagctc 1742
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>gb|BT018268.1| Zea mays clone EL01T0203B04.c mRNA sequence
          Length = 1353

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 95/119 (79%)
 Strand = Plus / Minus

                                                                       
Query: 237 ccccatctcacgttgtactttgctgccaggtagtgggcgcccacgggcccgcggctcccg 296
           |||||||| ||||||||||| || || |  |||||||| ||||| || || ||||| || 
Sbjct: 922 ccccatcttacgttgtacttggcggcgaaatagtgggcccccacagggccacggcttcca 863

                                                                      
Query: 297 taggggtacagctcgggggccatccgcttctgctccagctccttgagaaggggcgtgaa 355
           || ||||| | ||| || || ||||||||||  |||| |||||| || ||||| |||||
Sbjct: 862 tatgggtaaaactcaggagctatccgcttctcttccaactccttcaggaggggtgtgaa 804
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>ref|XM_857866.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 30 (LOC479836),
            mRNA
          Length = 6576

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2730 gcttctgctccagctccttgag 2709
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>ref|XM_857838.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 29 (LOC479836),
            mRNA
          Length = 6597

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2751 gcttctgctccagctccttgag 2730
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>ref|XM_857817.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 28 (LOC479836),
            mRNA
          Length = 6552

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2706 gcttctgctccagctccttgag 2685
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>ref|XM_857792.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 27 (LOC479836),
            mRNA
          Length = 6621

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2775 gcttctgctccagctccttgag 2754
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>ref|XM_857773.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 26 (LOC479836),
            mRNA
          Length = 6558

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2712 gcttctgctccagctccttgag 2691
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>ref|XM_857752.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 25 (LOC479836),
            mRNA
          Length = 6558

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2712 gcttctgctccagctccttgag 2691
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>ref|XM_857727.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 24 (LOC479836),
            mRNA
          Length = 6588

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2742 gcttctgctccagctccttgag 2721
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>ref|XM_857703.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 23 (LOC479836),
            mRNA
          Length = 6600

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2754 gcttctgctccagctccttgag 2733
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>ref|XM_857678.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 22 (LOC479836),
            mRNA
          Length = 6558

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2712 gcttctgctccagctccttgag 2691
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>ref|XM_857656.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 21 (LOC479836),
            mRNA
          Length = 6558

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2712 gcttctgctccagctccttgag 2691
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>ref|XM_857628.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 20 (LOC479836),
            mRNA
          Length = 6597

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2751 gcttctgctccagctccttgag 2730
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>ref|XM_536963.2| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 1 (LOC479836),
            mRNA
          Length = 6279

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2433 gcttctgctccagctccttgag 2412
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>ref|XM_857578.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 19 (LOC479836),
            mRNA
          Length = 5945

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2799 gcttctgctccagctccttgag 2778
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>ref|XM_857554.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 18 (LOC479836),
            mRNA
          Length = 6579

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2733 gcttctgctccagctccttgag 2712
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>ref|XM_857531.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 17 (LOC479836),
            mRNA
          Length = 6684

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2838 gcttctgctccagctccttgag 2817
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>ref|XM_857511.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 16 (LOC479836),
            mRNA
          Length = 6708

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2862 gcttctgctccagctccttgag 2841
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>ref|XM_857488.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 15 (LOC479836),
            mRNA
          Length = 6585

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2739 gcttctgctccagctccttgag 2718
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>ref|XM_857461.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 14 (LOC479836),
            mRNA
          Length = 6600

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2754 gcttctgctccagctccttgag 2733
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>ref|XM_857438.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 13 (LOC479836),
            mRNA
          Length = 6603

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2757 gcttctgctccagctccttgag 2736
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>ref|XM_857414.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 12 (LOC479836),
            mRNA
          Length = 6600

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2754 gcttctgctccagctccttgag 2733
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>ref|XM_857386.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 11 (LOC479836),
            mRNA
          Length = 6588

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2742 gcttctgctccagctccttgag 2721
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>ref|XM_857361.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 10 (LOC479836),
            mRNA
          Length = 5939

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2793 gcttctgctccagctccttgag 2772
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>ref|XM_857335.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 9 (LOC479836),
            mRNA
          Length = 6663

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2817 gcttctgctccagctccttgag 2796
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>ref|XM_857303.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 8 (LOC479836),
            mRNA
          Length = 5897

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2730 gcttctgctccagctccttgag 2709
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>ref|XM_857275.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 7 (LOC479836),
            mRNA
          Length = 5984

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2838 gcttctgctccagctccttgag 2817
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>ref|XM_857247.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 6 (LOC479836),
            mRNA
          Length = 6420

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2574 gcttctgctccagctccttgag 2553
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>ref|XM_857226.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 5 (LOC479836),
            mRNA
          Length = 5259

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2730 gcttctgctccagctccttgag 2709
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>ref|XM_857198.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 4 (LOC479836),
            mRNA
          Length = 6615

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2730 gcttctgctccagctccttgag 2709
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>ref|XM_845671.1| PREDICTED: Canis familiaris similar to smooth muscle myosin heavy
            chain 11 isoform SM1, transcript variant 3 (LOC479836),
            mRNA
          Length = 6576

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 322  gcttctgctccagctccttgag 343
            ||||||||||||||||||||||
Sbjct: 2730 gcttctgctccagctccttgag 2709
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>ref|XM_524851.1| PREDICTED: Pan troglodytes similar to actin-related protein M2;
           actin-related protein hArpM2; actin-related protein T2
           (LOC469468), mRNA
          Length = 1134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 326 ctgctccagctccttgagaag 346
           |||||||||||||||||||||
Sbjct: 963 ctgctccagctccttgagaag 943
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>ref|NM_080431.4| Homo sapiens actin-related protein T2 (ACTRT2), mRNA
          Length = 1437

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  ctgctccagctccttgagaag 346
            |||||||||||||||||||||
Sbjct: 1168 ctgctccagctccttgagaag 1148
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>ref|XM_501776.1| Yarrowia lipolytica CLIB122, YALI0C12859g predicted mRNA
          Length = 2322

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 321 cgcttctgctccagctccttg 341
           |||||||||||||||||||||
Sbjct: 395 cgcttctgctccagctccttg 375
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>emb|AL356984.13| Human DNA sequence from clone RP11-333E3 on chromosome 1 Contains the
             gene for actin-related protein M2 (ARPM2), complete
             sequence
          Length = 38206

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   ctgctccagctccttgagaag 346
             |||||||||||||||||||||
Sbjct: 31862 ctgctccagctccttgagaag 31842
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>dbj|AB179451.1| Macaca fascicularis testis cDNA clone: QtsA-20323, similar to human
            actin-related protein M2 (ARPM2), mRNA, RefSeq:
            NM_080431.3
          Length = 1375

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  ctgctccagctccttgagaag 346
            |||||||||||||||||||||
Sbjct: 1099 ctgctccagctccttgagaag 1079
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>gb|BC029499.1| Homo sapiens actin-related protein T2, mRNA (cDNA clone MGC:33234
            IMAGE:5270604), complete cds
          Length = 1414

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  ctgctccagctccttgagaag 346
            |||||||||||||||||||||
Sbjct: 1146 ctgctccagctccttgagaag 1126
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 321     cgcttctgctccagctccttg 341
               |||||||||||||||||||||
Sbjct: 1777827 cgcttctgctccagctccttg 1777847
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>gb|AF440740.1| Homo sapiens actin-related protein T2 (ACTRT2) mRNA, complete cds
          Length = 1134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 326 ctgctccagctccttgagaag 346
           |||||||||||||||||||||
Sbjct: 963 ctgctccagctccttgagaag 943
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>dbj|AB057364.1| Homo sapiens mRNA for actin-related protein hArpM2, complete cds
          Length = 1134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 326 ctgctccagctccttgagaag 346
           |||||||||||||||||||||
Sbjct: 963 ctgctccagctccttgagaag 943
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>gb|AC169122.1| Mus musculus BAC clone RP23-167K9 from chromosome 17, complete sequence
          Length = 127115

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaggtgcaggccctttgcag 134
             ||||||||||||||||||||
Sbjct: 94841 aaggtgcaggccctttgcag 94822
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>ref|XM_608513.2| PREDICTED: Bos taurus similar to smooth muscle myosin heavy chain 11
            isoform SM1 (LOC530050), partial mRNA
          Length = 5243

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  ttctgctccagctccttgag 343
            ||||||||||||||||||||
Sbjct: 1391 ttctgctccagctccttgag 1372
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>ref|XM_368077.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG07981.4) partial mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 262 ccaggtagtgggcgcccacg 281
           ||||||||||||||||||||
Sbjct: 982 ccaggtagtgggcgcccacg 963
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>ref|XM_801870.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510163.10) partial mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 atcgccgccaaaaacagaag 178
           ||||||||||||||||||||
Sbjct: 579 atcgccgccaaaaacagaag 598
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>emb|Z49889.1|CET06H11 Caenorhabditis elegans Cosmid T06H11, complete sequence
          Length = 41472

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  tccagctccttgagaaggggcgtg 353
            |||||||||||| |||||||||||
Sbjct: 7043 tccagctccttgcgaaggggcgtg 7066
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>ref|XM_815305.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506459.280) partial mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 atcgccgccaaaaacagaag 178
           ||||||||||||||||||||
Sbjct: 579 atcgccgccaaaaacagaag 598
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>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence
          Length = 212387

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     accaacatatatatatccac 31
              ||||||||||||||||||||
Sbjct: 144225 accaacatatatatatccac 144206
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>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tggtaccaacatatatatat 27
              ||||||||||||||||||||
Sbjct: 227918 tggtaccaacatatatatat 227899
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>gb|AC025575.21| Homo sapiens 12 BAC RP11-934P3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 158531

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    acatatatatatccacggtc 35
             ||||||||||||||||||||
Sbjct: 64143 acatatatatatccacggtc 64124
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>ref|NM_077292.2| Caenorhabditis elegans W07E11.1 (W07E11.1) mRNA, complete cds
          Length = 6793

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 330  tccagctccttgagaaggggcgtg 353
            |||||||||||| |||||||||||
Sbjct: 5400 tccagctccttgcgaaggggcgtg 5423
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>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence
          Length = 193015

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     ccagtggtaccaacatatatatat 27
             ||||||||||| ||||||||||||
Sbjct: 83484 ccagtggtacctacatatatatat 83461
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 357     agctcccatgcggcgtccagctcg 380
               |||||||| |||||||||||||||
Sbjct: 4133168 agctcccaggcggcgtccagctcg 4133145
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     tgcggcgtccagctcgtccg 384
               ||||||||||||||||||||
Sbjct: 2031506 tgcggcgtccagctcgtccg 2031525
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>gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, complete sequence
          Length = 197288

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   cccatctcacgttgtacttt 257
             ||||||||||||||||||||
Sbjct: 60626 cccatctcacgttgtacttt 60645
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>gb|AC169676.2| Mus musculus BAC clone RP24-163P20 from chromosome 17, complete
             sequence
          Length = 150204

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   aaggtgcaggccctttgcag 134
             ||||||||||||||||||||
Sbjct: 68112 aaggtgcaggccctttgcag 68093


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,160,049
Number of Sequences: 3902068
Number of extensions: 3160049
Number of successful extensions: 50321
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50151
Number of HSP's gapped (non-prelim): 170
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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