ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95f07 |
|---|---|
| Clone Library Name | barley_pub |
>CH10_ANASP (Q8YQZ9) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 103 Score = 34.3 bits (77), Expect = 0.073 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 9/63 (14%) Frame = -2 Query: 401 ERYLMGEILSVGVDVS---------EVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLL 249 E+ +GE++++G EV+ G KVL+S +V LGTEE + E D+L Sbjct: 41 EKPQVGEVVALGAGKRNDDGSRQELEVKVGDKVLYSKYAGTDVKLGTEE-YVLLSEKDIL 99 Query: 248 AVV 240 AVV Sbjct: 100 AVV 102
>CH10_THETN (Q8R5T8) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 33.1 bits (74), Expect = 0.16 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 8/62 (12%) Frame = -2 Query: 401 ERYLMGEILSVG----VDVS----EVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLLA 246 E+ GE+++VG +D EV+ G +V+FS EV L EE + RESD+LA Sbjct: 33 EKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEE-YLLLRESDILA 91 Query: 245 VV 240 ++ Sbjct: 92 II 93
>CH10_THEBR (Q60023) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 33.1 bits (74), Expect = 0.16 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 8/62 (12%) Frame = -2 Query: 401 ERYLMGEILSVGVDVS--------EVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLLA 246 E+ GE+++VG EV+ G +V+FS EV L EE + RESD+LA Sbjct: 33 EKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEE-YLLLRESDILA 91 Query: 245 VV 240 ++ Sbjct: 92 II 93
>CH10_ACIAD (Q6F8P5) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 96 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 386 GEILSVGVDVSEVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLLAVV 240 G+I GV +V+AG KVLF V + EE +ESD+LAV+ Sbjct: 47 GQITENGVRALDVKAGDKVLFGTYAGTTVKVNGEE-FLIMKESDILAVL 94
>CH10_PROMM (Q7TUS3) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 103 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 9/63 (14%) Frame = -2 Query: 401 ERYLMGEILSVGV---------DVSEVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLL 249 E+ +GE++ VG EV G KVL+S ++ L T+E + E D+L Sbjct: 41 EKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLSTDE-YVLLSEKDIL 99 Query: 248 AVV 240 AVV Sbjct: 100 AVV 102
>CB010_HUMAN (Q7Z570) Protein C2orf10| Length = 1209 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 257 PTLCRSSASLLFPGPPHKRLCPRREPSF 340 P L R+S L GP RLCP +P+F Sbjct: 1136 PALTRTSLPQLSVGPVGPRLCPGNQPTF 1163
>CPS12_ACTPL (Q69AA9) Capsular polysaccharide phosphotransferase cps12A (EC| 2.7.-.-) (Stealth protein cps12A) Length = 371 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Frame = -3 Query: 256 ISWLSSHE--RTPKILCCAY----APNSLSLSRKLLLAQSL 152 I WL E PKI C Y +PN++SL +KLLL Q + Sbjct: 296 IPWLMYFEGKAMPKIDICYYFNIRSPNAISLYKKLLLKQQM 336
>CH102_BRAJA (P35863) 10 kDa chaperonin 2 (Protein Cpn10 2) (groES protein 2)| Length = 104 Score = 28.1 bits (61), Expect = 5.2 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%) Frame = -2 Query: 401 ERYLMGEILSVGV---DVS------EVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLL 249 E+ GE+++VG D S +V G +VLF + EV + T+E +ESD++ Sbjct: 33 EKPSQGEVIAVGPGGRDESGKLIPIDVRVGDRVLFGKWSGTEVKIDTQEL-LIMKESDIM 91 Query: 248 AVVA 237 V+A Sbjct: 92 GVLA 95
>SUR2_CAEEL (Q10669) Protein sur-2| Length = 1587 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 299 PPHKRLCPRREPSFQLQLH*HQHRPIKSRPS 391 PP K P +E + + H H+P++S PS Sbjct: 1385 PPEKEKSPEKEKEQEQEQHVKAHQPLESTPS 1415
>CDC23_MOUSE (Q8BGZ4) Cell division cycle protein 23 homolog (Anaphase-promoting| complex subunit 8) (APC8) (Cyclosome subunit 8) Length = 597 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 229 CAHATTAKRSDSLQKQCFSSVPRSTS*AFMSEKRTFFPASTSLTSTPTDKISPIKYLS 402 CA T + +L +Q + + + F PAS S +TPT ++SP+ S Sbjct: 537 CAFNDTREEGKALLRQILQLRNQGETPTSDTPGTFFLPASLSANNTPTRRVSPLNLSS 594
>CH10_SYMTH (Q67KB7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 97 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = -2 Query: 386 GEILSVGVDVS-EVEAGKKVLFSDINAYEVDLGTEEKHCFCRESDLLAVV 240 G L G V EV+ G V+FS EV + EE E D+LA+V Sbjct: 46 GRTLESGTKVELEVKEGDTVIFSKYAGTEVKIDGEEYIILDGERDILAIV 95
>ATPF_RICCN (Q92JP3) ATP synthase B chain (EC 3.6.3.14)| Length = 164 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 1/97 (1%) Frame = +3 Query: 57 KIKSPCPHTFLATKETHVSKTHQITQPMIVNERL*ASKSLRDKDKEFGAYAQHKILGVRS 236 K+K F T + K + MI + K +++K KE + +HK Sbjct: 49 KLKEDAALLFKHTN-AQIKKLETLRSQMIEDSNEVTKKIIQEKTKEIEEFLEHKKSDAIQ 107 Query: 237 CDDSQEIRLSAEAVLLFCSQV-HLISVYVREENLLSS 344 +Q+ S E FC +V L+S Y + L S Sbjct: 108 LMQNQKSTASKELQDEFCDEVIKLVSEYFQSVKLSES 144
>UBP2L_HUMAN (Q14157) Ubiquitin-associated protein 2-like| Length = 983 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 48 GTSKIKSPCPHTFLATKETHVSKTHQITQPMIVNERL 158 G SP P T LA + + ++TH TQ +N L Sbjct: 866 GRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPAL 902 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,988,075 Number of Sequences: 219361 Number of extensions: 1170846 Number of successful extensions: 3136 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3136 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
