Clone Name | rbaet95f06 |
---|---|
Clone Library Name | barley_pub |
>C77A1_SOLME (P37123) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1)| (P-450EG6) (Fragment) Length = 499 Score = 37.7 bits (86), Expect = 0.012 Identities = 18/31 (58%), Positives = 21/31 (67%) Frame = -2 Query: 433 AHPSQPAVDFKDKVEFTVVMNQPLLATVKPR 341 A+P VDF +K+EFTVVM PL A VK R Sbjct: 468 AYPGNNKVDFSEKLEFTVVMKNPLRAKVKLR 498
>C77A3_SOYBN (O48928) Cytochrome P450 77A3 (EC 1.14.-.-)| Length = 513 Score = 37.7 bits (86), Expect = 0.012 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -2 Query: 433 AHPSQPAVDFKDKVEFTVVMNQPLLATVKPR 341 A+P + +DF K EFTVVM + L AT+KPR Sbjct: 476 AYPPEKKMDFTGKWEFTVVMKESLRATIKPR 506
>C77A2_SOLME (P37124) Cytochrome P450 77A2 (EC 1.14.-.-) (CYPLXXVIIA2)| (P-450EG5) Length = 511 Score = 37.0 bits (84), Expect = 0.021 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -2 Query: 433 AHPSQPAVDFKDKVEFTVVMNQPLLATVKPR 341 A P VDF +K+EFTVVM L A +KPR Sbjct: 480 ADPENTRVDFTEKLEFTVVMKNTLRAKIKPR 510
>C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXXIX) (ATH 6-1)| Length = 506 Score = 31.6 bits (70), Expect = 0.87 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 Query: 412 VDFKDKVEFTVVMNQPLLATVKPRK 338 VD +K+EFTVVM PL A PR+ Sbjct: 480 VDLTEKLEFTVVMKHPLKALAVPRR 504
>ERFB_CANGA (Q6FSS4) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC cysteine-rich| domain-containing protein ERF2) (Ras protein acyltransferase) Length = 326 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = -1 Query: 371 PAAAGHGEASEDVALMHVHACMWIGG--GRQSYSYVSRSYLRTSNAC 237 P A H E L H H C+W+ G+++Y Y L ++ AC Sbjct: 168 PPRASHCSVCECCVLTHDHHCIWVNNCVGQRNYRYFLAFLLSSTLAC 214
>ATP6_MYXGL (O63912) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 228 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +1 Query: 142 TLGHFFIMLESVGMVLAHVALRADLTARVIAMHAL 246 TL F I++ES+ +++ +AL LTA + A H L Sbjct: 138 TLAPFLIVIESISIIIRPLALGVRLTANITAGHLL 172
>GLNA1_RHILV (P09826) Glutamine synthetase 1 (EC 6.3.1.2) (Glutamine synthetase| I) (Glutamate--ammonia ligase I) (GSI) Length = 469 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/60 (28%), Positives = 26/60 (43%) Frame = -1 Query: 326 MHVHACMWIGGGRQSYSYVSRSYLRTSNACIAITRAVRSARKATCASTMPTDSSIMKKCP 147 MHVH +W GG ++ Y S +C+ + KA A T P+ +S + P Sbjct: 269 MHVHQSIWKGG---KPTFAGDEYAGLSESCLFYIGGIIKHAKAINAFTNPSTNSYKRFVP 325
>SYFB_NOCFA (Q5YYH6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 834 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -1 Query: 362 AGHGEASEDVALMHVHACMWIGGGRQSYSYVSR 264 +G GE ED+AL V+ G GR+S +Y R Sbjct: 768 SGGGELLEDIALFDVYEGAQAGEGRKSLTYALR 800
>ERFB_KLULA (Q6CQB5) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC cysteine-rich| domain-containing protein ERF2) (Ras protein acyltransferase) Length = 355 Score = 28.5 bits (62), Expect = 7.4 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Frame = -1 Query: 371 PAAAGHGEASEDVALMHVHACMWIGG--GRQSYSYVSRSYLRTSNACIAITRAVRSARKA 198 P + H + L H H C W+ G+++Y + + ++ +CI + + S R + Sbjct: 182 PPRSAHCSVCDVCVLSHDHHCKWLNNCIGKRNYRFFLEFLMASTISCILLI-LLSSFRLS 240 Query: 197 TCASTMPTDSSIMKKCPSVL*IYIPSVV 114 T S++ C L I+ P ++ Sbjct: 241 YSPQVRYTPVSLLIICYCGLGIWYPLIL 268
>HEMN_SYNVU (O31067) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) (Fragment) Length = 325 Score = 28.1 bits (61), Expect = 9.7 Identities = 10/23 (43%), Positives = 11/23 (47%) Frame = +3 Query: 141 HTRTLFHNAGIGRHGTGTCGFTC 209 H T F + G HG CGF C Sbjct: 210 HLATYFSDVAAGHHGPQECGFNC 232
>SYFB_MANSM (Q65TL3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 795 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Frame = +2 Query: 326 SERHLPRLHRGQQR------LVHHHRELHLILEVHRRL 421 SE HLP+L++ Q R L+ HH E + E+ RL Sbjct: 396 SETHLPKLNKVQLRRSKLDALLGHHIETETVTEIFHRL 433
>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)| Length = 1412 Score = 28.1 bits (61), Expect = 9.7 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 278 STTAGHPRSTCMHARASERHLPRLHRGQQRLVHHHRE 388 +TT+G P+ S +HL R H +HH+++ Sbjct: 145 TTTSGTPQIIITRTLPSNQHLSRRHSASPSALHHYQQ 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,096,247 Number of Sequences: 219361 Number of extensions: 1176895 Number of successful extensions: 3564 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3561 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)