ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C77A1_SOLME (P37123) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXV... 38 0.012
2C77A3_SOYBN (O48928) Cytochrome P450 77A3 (EC 1.14.-.-) 38 0.012
3C77A2_SOLME (P37124) Cytochrome P450 77A2 (EC 1.14.-.-) (CYPLXXV... 37 0.021
4C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXX... 32 0.87
5ERFB_CANGA (Q6FSS4) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC... 31 1.1
6ATP6_MYXGL (O63912) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 30 1.9
7GLNA1_RHILV (P09826) Glutamine synthetase 1 (EC 6.3.1.2) (Glutam... 29 4.3
8SYFB_NOCFA (Q5YYH6) Phenylalanyl-tRNA synthetase beta chain (EC ... 28 7.4
9ERFB_KLULA (Q6CQB5) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC... 28 7.4
10HEMN_SYNVU (O31067) Oxygen-independent coproporphyrinogen III ox... 28 9.7
11SYFB_MANSM (Q65TL3) Phenylalanyl-tRNA synthetase beta chain (EC ... 28 9.7
12E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C) 28 9.7

>C77A1_SOLME (P37123) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1)|
           (P-450EG6) (Fragment)
          Length = 499

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -2

Query: 433 AHPSQPAVDFKDKVEFTVVMNQPLLATVKPR 341
           A+P    VDF +K+EFTVVM  PL A VK R
Sbjct: 468 AYPGNNKVDFSEKLEFTVVMKNPLRAKVKLR 498



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>C77A3_SOYBN (O48928) Cytochrome P450 77A3 (EC 1.14.-.-)|
          Length = 513

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -2

Query: 433 AHPSQPAVDFKDKVEFTVVMNQPLLATVKPR 341
           A+P +  +DF  K EFTVVM + L AT+KPR
Sbjct: 476 AYPPEKKMDFTGKWEFTVVMKESLRATIKPR 506



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>C77A2_SOLME (P37124) Cytochrome P450 77A2 (EC 1.14.-.-) (CYPLXXVIIA2)|
           (P-450EG5)
          Length = 511

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = -2

Query: 433 AHPSQPAVDFKDKVEFTVVMNQPLLATVKPR 341
           A P    VDF +K+EFTVVM   L A +KPR
Sbjct: 480 ADPENTRVDFTEKLEFTVVMKNTLRAKIKPR 510



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>C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXXIX) (ATH 6-1)|
          Length = 506

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 412 VDFKDKVEFTVVMNQPLLATVKPRK 338
           VD  +K+EFTVVM  PL A   PR+
Sbjct: 480 VDLTEKLEFTVVMKHPLKALAVPRR 504



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>ERFB_CANGA (Q6FSS4) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC cysteine-rich|
           domain-containing protein ERF2) (Ras protein
           acyltransferase)
          Length = 326

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = -1

Query: 371 PAAAGHGEASEDVALMHVHACMWIGG--GRQSYSYVSRSYLRTSNAC 237
           P  A H    E   L H H C+W+    G+++Y Y     L ++ AC
Sbjct: 168 PPRASHCSVCECCVLTHDHHCIWVNNCVGQRNYRYFLAFLLSSTLAC 214



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>ATP6_MYXGL (O63912) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 228

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 142 TLGHFFIMLESVGMVLAHVALRADLTARVIAMHAL 246
           TL  F I++ES+ +++  +AL   LTA + A H L
Sbjct: 138 TLAPFLIVIESISIIIRPLALGVRLTANITAGHLL 172



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>GLNA1_RHILV (P09826) Glutamine synthetase 1 (EC 6.3.1.2) (Glutamine synthetase|
           I) (Glutamate--ammonia ligase I) (GSI)
          Length = 469

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -1

Query: 326 MHVHACMWIGGGRQSYSYVSRSYLRTSNACIAITRAVRSARKATCASTMPTDSSIMKKCP 147
           MHVH  +W GG     ++    Y   S +C+     +    KA  A T P+ +S  +  P
Sbjct: 269 MHVHQSIWKGG---KPTFAGDEYAGLSESCLFYIGGIIKHAKAINAFTNPSTNSYKRFVP 325



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>SYFB_NOCFA (Q5YYH6) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 834

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 362 AGHGEASEDVALMHVHACMWIGGGRQSYSYVSR 264
           +G GE  ED+AL  V+     G GR+S +Y  R
Sbjct: 768 SGGGELLEDIALFDVYEGAQAGEGRKSLTYALR 800



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>ERFB_KLULA (Q6CQB5) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC cysteine-rich|
           domain-containing protein ERF2) (Ras protein
           acyltransferase)
          Length = 355

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
 Frame = -1

Query: 371 PAAAGHGEASEDVALMHVHACMWIGG--GRQSYSYVSRSYLRTSNACIAITRAVRSARKA 198
           P  + H    +   L H H C W+    G+++Y +     + ++ +CI +   + S R +
Sbjct: 182 PPRSAHCSVCDVCVLSHDHHCKWLNNCIGKRNYRFFLEFLMASTISCILLI-LLSSFRLS 240

Query: 197 TCASTMPTDSSIMKKCPSVL*IYIPSVV 114
                  T  S++  C   L I+ P ++
Sbjct: 241 YSPQVRYTPVSLLIICYCGLGIWYPLIL 268



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>HEMN_SYNVU (O31067) Oxygen-independent coproporphyrinogen III oxidase (EC|
           1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase)
           (Fragment)
          Length = 325

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 141 HTRTLFHNAGIGRHGTGTCGFTC 209
           H  T F +   G HG   CGF C
Sbjct: 210 HLATYFSDVAAGHHGPQECGFNC 232



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>SYFB_MANSM (Q65TL3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 795

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = +2

Query: 326 SERHLPRLHRGQQR------LVHHHRELHLILEVHRRL 421
           SE HLP+L++ Q R      L+ HH E   + E+  RL
Sbjct: 396 SETHLPKLNKVQLRRSKLDALLGHHIETETVTEIFHRL 433



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>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)|
          Length = 1412

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 278 STTAGHPRSTCMHARASERHLPRLHRGQQRLVHHHRE 388
           +TT+G P+        S +HL R H      +HH+++
Sbjct: 145 TTTSGTPQIIITRTLPSNQHLSRRHSASPSALHHYQQ 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,096,247
Number of Sequences: 219361
Number of extensions: 1176895
Number of successful extensions: 3564
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3561
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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