ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
2dbj|AK064758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
3gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple... 48 0.024
4gb|AF384111.2| Cynodon dactylon phytochelatins synthase (pcs1) m... 46 0.095
5gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, comp... 44 0.37
6gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's ... 44 0.37
7gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, co... 44 0.37
8gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence 44 0.37
9gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosom... 44 0.37
10gb|AC140438.3| Mus musculus BAC clone RP24-106N10 from 12, compl... 44 0.37
11emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chr... 44 0.37
12gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, comp... 42 1.5
13gb|BC050513.1| Danio rerio heterogeneous nuclear ribonucleoprote... 42 1.5
14gb|BC065334.1| Danio rerio heterogeneous nuclear ribonucleoprote... 42 1.5
15gb|AY553634.1| Cynodon dactylon phytochelatins synthase pcsII mR... 42 1.5
16gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.5
17gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, co... 42 1.5
18gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, co... 42 1.5
19emb|BX088707.15| Zebrafish DNA sequence from clone CH211-195B11 ... 42 1.5
20emb|BX544890.7| Zebrafish DNA sequence from clone DKEY-240I4 in ... 42 1.5
21ref|XM_693149.1| PREDICTED: Danio rerio similar to Hnrpa0l prote... 42 1.5
22ref|XM_691789.1| PREDICTED: Danio rerio heterogeneous nuclear ri... 42 1.5
23gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosom... 42 1.5
24gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Can... 42 1.5
25ref|NM_124430.2| Arabidopsis thaliana DNA binding / transcriptio... 40 5.8
26gb|AC167017.4| Mus musculus BAC clone RP24-86L13 from chromosome... 40 5.8
27gb|BT015006.1| Arabidopsis thaliana At5g50480 mRNA, complete cds 40 5.8
28gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 5.8
29gb|BT014783.1| Arabidopsis thaliana At5g50480 gene, complete cds 40 5.8
30gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
31gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
32gb|AC142098.2| Mus musculus BAC clone RP24-458F14 from chromosom... 40 5.8
33gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosom... 40 5.8
34gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosom... 40 5.8
35gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete... 40 5.8
36emb|BX005133.4| Human DNA sequence from clone DASS-103C7 on chro... 40 5.8
37emb|AL662781.4| Human DNA sequence from clone XXbac-1H2 on chrom... 40 5.8
38emb|AL662857.3| Human DNA sequence from clone XXbac-147D4 on chr... 40 5.8
39emb|AL591470.12| Human DNA sequence from clone RP11-263I4 on chr... 40 5.8
40emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.8
41emb|CR759808.2| Human DNA sequence from clone DAMC-143C14 on chr... 40 5.8
42emb|CR753509.3| Human DNA sequence from clone DADB-246O10 on chr... 40 5.8
43dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
44emb|BX833348.1|CNS0A0DZ Arabidopsis thaliana Full-length cDNA Co... 40 5.8
45emb|BX927232.4| Human DNA sequence from clone DAMA-334F21 on chr... 40 5.8
46dbj|AB025619.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.8
47emb|X05776.1|VCIND Volvox carteri gene fragment for sexual induc... 40 5.8
48gb|AC154244.2| Mus musculus BAC clone RP24-321P20 from 17, compl... 40 5.8
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
50emb|AL096770.17|HSBA150A6 Human DNA sequence from clone RP11-150... 40 5.8
51gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 5.8
52emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on ch... 40 5.8
53emb|AL645911.14| Mouse DNA sequence from clone RP23-25M3 on chro... 40 5.8
54emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chrom... 40 5.8
55dbj|AP000902.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 5.8
56emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chr... 40 5.8 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                            
Query: 338      cttccgaggcttcaccgtggccagcagcggctggttcatcaccaccgtgaactccacctt 397
                |||||||||  | ||| |||| ||||||||| | ||||||||||| ||||||||||||||
Sbjct: 20222459 cttccgaggtgtgaccatggcgagcagcggccgcttcatcaccacggtgaactccacctt 20222400

                                                 
Query: 398      atccttgaagtccaccgccggctgcgacgggtg 430
                 |||| |||||| | || |||||||||||||||
Sbjct: 20222399 gtcctcgaagtcgagcggcggctgcgacgggtg 20222367
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>dbj|AK064758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G11, full
            insert sequence
          Length = 1698

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 338  cttccgaggcttcaccgtggccagcagcggctggttcatcaccaccgtgaactccacctt 397
            |||||||||  | ||| |||| ||||||||| | ||||||||||| ||||||||||||||
Sbjct: 1394 cttccgaggtgtgaccatggcgagcagcggccgcttcatcaccacggtgaactccacctt 1335

                                             
Query: 398  atccttgaagtccaccgccggctgcgacgggtg 430
             |||| |||||| | || |||||||||||||||
Sbjct: 1334 gtcctcgaagtcgagcggcggctgcgacgggtg 1302
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>gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, complete sequence
          Length = 63849

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 303   ccacatgcatgcatgcacgtgcat 326
             ||||||||||||||||||||||||
Sbjct: 55617 ccacatgcatgcatgcacgtgcat 55640
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>gb|AF384111.2| Cynodon dactylon phytochelatins synthase (pcs1) mRNA, complete cds
          Length = 1880

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 402 ttgaagtccaccgccggctgcgacggg 428
           |||||||||||||||||| ||||||||
Sbjct: 103 ttgaagtccaccgccggcggcgacggg 77
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>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence
          Length = 235928

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 304    cacatgcatgcatgcacgtgca 325
              ||||||||||||||||||||||
Sbjct: 136594 cacatgcatgcatgcacgtgca 136615
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>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 204000

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 304   cacatgcatgcatgcacgtgca 325
             ||||||||||||||||||||||
Sbjct: 51866 cacatgcatgcatgcacgtgca 51887
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>gb|AC118216.15| Mus musculus chromosome 1, clone RP23-209N14, complete sequence
          Length = 269784

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 304    cacatgcatgcatgcacgtgca 325
              ||||||||||||||||||||||
Sbjct: 117206 cacatgcatgcatgcacgtgca 117227
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>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence
          Length = 146078

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 372   ttcatcaccaccgtgaactcca 393
             ||||||||||||||||||||||
Sbjct: 93855 ttcatcaccaccgtgaactcca 93876
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>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete
            sequence
          Length = 157435

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 304  cacatgcatgcatgcacgtgca 325
            ||||||||||||||||||||||
Sbjct: 6137 cacatgcatgcatgcacgtgca 6116
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>gb|AC140438.3| Mus musculus BAC clone RP24-106N10 from 12, complete sequence
          Length = 154736

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 304   cacatgcatgcatgcacgtgca 325
             ||||||||||||||||||||||
Sbjct: 16554 cacatgcatgcatgcacgtgca 16575
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>emb|CT009764.9| Mouse DNA sequence from clone RP23-173E21 on chromosome 12, complete
             sequence
          Length = 214925

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 304   cacatgcatgcatgcacgtgca 325
             ||||||||||||||||||||||
Sbjct: 63822 cacatgcatgcatgcacgtgca 63843
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>gb|AC167466.6| Mus musculus chromosome 7, clone RP24-220N8, complete sequence
          Length = 163721

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   catgcatgcatgcacgtgcat 326
             |||||||||||||||||||||
Sbjct: 45469 catgcatgcatgcacgtgcat 45449
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>gb|BC050513.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0, like, mRNA
           (cDNA clone IMAGE:5602478), partial cds
          Length = 1462

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 agcggctggttcatcaccacc 383
           |||||||||||||||||||||
Sbjct: 188 agcggctggttcatcaccacc 168
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>gb|BC065334.1| Danio rerio heterogeneous nuclear ribonucleoprotein A0, like, mRNA
           (cDNA clone IMAGE:6964916), partial cds
          Length = 1394

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 agcggctggttcatcaccacc 383
           |||||||||||||||||||||
Sbjct: 119 agcggctggttcatcaccacc 99
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>gb|AY553634.1| Cynodon dactylon phytochelatins synthase pcsII mRNA, complete cds
          Length = 1020

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 404 gaagtccaccgccggctgcgacggg 428
           |||||||||||||||| ||||||||
Sbjct: 161 gaagtccaccgccggcggcgacggg 137
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 195     tgtggctttacgtgctgatct 215
               |||||||||||||||||||||
Sbjct: 2237783 tgtggctttacgtgctgatct 2237763
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>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence
          Length = 199240

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   catgcatgcatgcacgtgcat 326
             |||||||||||||||||||||
Sbjct: 68160 catgcatgcatgcacgtgcat 68180
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>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence
          Length = 215356

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   catgcatgcatgcacgtgcat 326
             |||||||||||||||||||||
Sbjct: 62904 catgcatgcatgcacgtgcat 62884
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>emb|BX088707.15| Zebrafish DNA sequence from clone CH211-195B11 in linkage group 14,
              complete sequence
          Length = 137128

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 363    agcggctggttcatcaccacc 383
              |||||||||||||||||||||
Sbjct: 132638 agcggctggttcatcaccacc 132618
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>emb|BX544890.7| Zebrafish DNA sequence from clone DKEY-240I4 in linkage group 14,
             complete sequence
          Length = 93993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 363   agcggctggttcatcaccacc 383
             |||||||||||||||||||||
Sbjct: 36839 agcggctggttcatcaccacc 36819
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>ref|XM_693149.1| PREDICTED: Danio rerio similar to Hnrpa0l protein (LOC569744), mRNA
          Length = 1696

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 agcggctggttcatcaccacc 383
           |||||||||||||||||||||
Sbjct: 241 agcggctggttcatcaccacc 221
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>ref|XM_691789.1| PREDICTED: Danio rerio heterogeneous nuclear ribonucleoprotein A0,
           like (hnrpa0l), mRNA
          Length = 1699

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 363 agcggctggttcatcaccacc 383
           |||||||||||||||||||||
Sbjct: 241 agcggctggttcatcaccacc 221
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>gb|AC151970.5| Mus musculus BAC clone RP24-255F16 from chromosome 15, complete
             sequence
          Length = 181163

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   catgcatgcatgcacgtgcat 326
             |||||||||||||||||||||
Sbjct: 92713 catgcatgcatgcacgtgcat 92693
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>gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 149754

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 302    tccacatgcatgcatgcacgtgcat 326
              ||||||||||||||||||| |||||
Sbjct: 107319 tccacatgcatgcatgcacatgcat 107295
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>ref|NM_124430.2| Arabidopsis thaliana DNA binding / transcription factor AT5G50480
           mRNA, complete cds
          Length = 891

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 353 cgtggccagcagcggctggt 372
           ||||||||||||||||||||
Sbjct: 539 cgtggccagcagcggctggt 558
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>gb|AC167017.4| Mus musculus BAC clone RP24-86L13 from chromosome 9, complete sequence
          Length = 183068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     caattcaaaatcatacaaac 38
              ||||||||||||||||||||
Sbjct: 168016 caattcaaaatcatacaaac 167997
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>gb|BT015006.1| Arabidopsis thaliana At5g50480 mRNA, complete cds
          Length = 609

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 353 cgtggccagcagcggctggt 372
           ||||||||||||||||||||
Sbjct: 539 cgtggccagcagcggctggt 558
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   catgcatgcatgcacgtgca 325
             ||||||||||||||||||||
Sbjct: 43431 catgcatgcatgcacgtgca 43450
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>gb|BT014783.1| Arabidopsis thaliana At5g50480 gene, complete cds
          Length = 785

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 353 cgtggccagcagcggctggt 372
           ||||||||||||||||||||
Sbjct: 555 cgtggccagcagcggctggt 574
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>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0480H08, complete sequence
          Length = 156301

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   tgcgatgcatgcattggacg 250
             ||||||||||||||||||||
Sbjct: 21404 tgcgatgcatgcattggacg 21385
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>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0060K21, complete sequence
          Length = 153973

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tgcgatgcatgcattggacg 250
              ||||||||||||||||||||
Sbjct: 146091 tgcgatgcatgcattggacg 146072
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>gb|AC142098.2| Mus musculus BAC clone RP24-458F14 from chromosome 19, complete sequence
          Length = 193811

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    gatccacatgcatgcatgca 319
              ||||||||||||||||||||
Sbjct: 168521 gatccacatgcatgcatgca 168502
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>gb|AC122299.5| Mus musculus BAC clone RP23-270L23 from chromosome 5, complete sequence
          Length = 209091

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   cacatgcatgcatgcacgtg 323
             ||||||||||||||||||||
Sbjct: 31354 cacatgcatgcatgcacgtg 31373
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>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence
          Length = 191346

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    gatccacatgcatgcatgca 319
              ||||||||||||||||||||
Sbjct: 128103 gatccacatgcatgcatgca 128122
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>gb|AC098716.2| Mus musculus BAC clone RP23-2F19 from 9, complete sequence
          Length = 214654

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     caattcaaaatcatacaaac 38
              ||||||||||||||||||||
Sbjct: 176158 caattcaaaatcatacaaac 176177
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>emb|BX005133.4| Human DNA sequence from clone DASS-103C7 on chromosome 6, complete
             sequence
          Length = 96209

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aattcaaaatcatacaaact 39
             ||||||||||||||||||||
Sbjct: 21042 aattcaaaatcatacaaact 21061
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>emb|AL662781.4| Human DNA sequence from clone XXbac-1H2 on chromosome 6 contains the
             OR5U1, OR5V1 and OR12D3 genes for olfactory receptor,
             family 5, subfamily U, member1, subfamily V, member 1 and
             family 12, subfamily D, member 3, the OR2B4P pseudogene
             for olfactory receptor, family 2, subfamily B, member 4
             and a DEAD/H box polypeptide 6 (DDX6) pseudogene, complete
             sequence
          Length = 106642

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aattcaaaatcatacaaact 39
             ||||||||||||||||||||
Sbjct: 48448 aattcaaaatcatacaaact 48467
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>emb|AL662857.3| Human DNA sequence from clone XXbac-147D4 on chromosome 6 contains the
              OR5U1 gene for olfactory receptor, family 5, subfamily U,
              member 1, the OR2H4P, OR2G1P, OR2U1P, OR2U2P, OR2B4P
              pseudogenes for olfactory receptor, family 2, subfamily H,
              member 4, subfamily G, member 1, subfamily U, member 1,
              subfamily U, member 2, subfamily B, member 4 and a DEAD/H
              (Asp-Glu-Ala-Asp) box polypeptide 6 (DDX6) (RNA helicase,
              54 kD) pseudogene, complete sequence
          Length = 136687

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     aattcaaaatcatacaaact 39
              ||||||||||||||||||||
Sbjct: 125963 aattcaaaatcatacaaact 125982
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>emb|AL591470.12| Human DNA sequence from clone RP11-263I4 on chromosome 9 Contains the
             3' end of a novel gene (KIAA0967), complete sequence
          Length = 60610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   cacatgcatgcatgcacgtgcatc 327
             |||||| |||||||||||||||||
Sbjct: 13969 cacatgtatgcatgcacgtgcatc 13992
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     taagttcttcaattcaaaatcata 33
              |||||||||||||||| |||||||
Sbjct: 604042 taagttcttcaattcataatcata 604065
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>emb|CR759808.2| Human DNA sequence from clone DAMC-143C14 on chromosome 6, complete
             sequence
          Length = 104964

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aattcaaaatcatacaaact 39
             ||||||||||||||||||||
Sbjct: 34325 aattcaaaatcatacaaact 34344
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>emb|CR753509.3| Human DNA sequence from clone DADB-246O10 on chromosome 6, complete
              sequence
          Length = 127540

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     aattcaaaatcatacaaact 39
              ||||||||||||||||||||
Sbjct: 110863 aattcaaaatcatacaaact 110882
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 231      tgcgatgcatgcattggacg 250
                ||||||||||||||||||||
Sbjct: 21263932 tgcgatgcatgcattggacg 21263913
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>emb|BX833348.1|CNS0A0DZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL46ZH02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 823

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 353 cgtggccagcagcggctggt 372
           ||||||||||||||||||||
Sbjct: 563 cgtggccagcagcggctggt 582
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>emb|BX927232.4| Human DNA sequence from clone DAMA-334F21 on chromosome 6, complete
             sequence
          Length = 99722

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aattcaaaatcatacaaact 39
             ||||||||||||||||||||
Sbjct: 32165 aattcaaaatcatacaaact 32184
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>dbj|AB025619.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBA10
          Length = 46323

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  cgtggccagcagcggctggt 372
            ||||||||||||||||||||
Sbjct: 8396 cgtggccagcagcggctggt 8377
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>emb|X05776.1|VCIND Volvox carteri gene fragment for sexual inducer glycoprotein
          Length = 681

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 306 catgcatgcatgcacgtgca 325
           ||||||||||||||||||||
Sbjct: 33  catgcatgcatgcacgtgca 52
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>gb|AC154244.2| Mus musculus BAC clone RP24-321P20 from 17, complete sequence
          Length = 172093

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      aatagaaataagttcttcaa 21
              ||||||||||||||||||||
Sbjct: 139037 aatagaaataagttcttcaa 139018
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 231      tgcgatgcatgcattggacg 250
                ||||||||||||||||||||
Sbjct: 21574131 tgcgatgcatgcattggacg 21574112
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>emb|AL096770.17|HSBA150A6 Human DNA sequence from clone RP11-150A6 on chromosome 6 Contains genes
             OR5U1, OR5V1 and OR12D3 for olfactory receptors 5U1, 5V1
             and 12D3, the 3' end of olfactory receptor 2B4 pseudogene
             OR2B4P, a DDX6 (DEAD/H (Asp-Glu-Ala-Asp/His) box
             polypeptide 6 (RNA helicase, 54kD)) pseudogene, STSs and
             GSSs, complete sequence
          Length = 97392

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aattcaaaatcatacaaact 39
             ||||||||||||||||||||
Sbjct: 43125 aattcaaaatcatacaaact 43144
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  catgcatgcatgcacgtgca 325
            ||||||||||||||||||||
Sbjct: 3271 catgcatgcatgcacgtgca 3252
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>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete
             sequence
          Length = 211585

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   atccacatgcatgcatgcac 320
             ||||||||||||||||||||
Sbjct: 91582 atccacatgcatgcatgcac 91563
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>emb|AL645911.14| Mouse DNA sequence from clone RP23-25M3 on chromosome 11, complete
              sequence
          Length = 244653

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    atgcatgcatgcacgtgcat 326
              ||||||||||||||||||||
Sbjct: 124087 atgcatgcatgcacgtgcat 124068
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>emb|AL845352.7| Mouse DNA sequence from clone RP23-29A7 on chromosome 2, complete
             sequence
          Length = 196996

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gtatatatatctatagcaca 144
             ||||||||||||||||||||
Sbjct: 27570 gtatatatatctatagcaca 27551
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>dbj|AP000902.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-692N5, complete
              sequences
          Length = 186626

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     aattcaaaatcatacaaact 39
              ||||||||||||||||||||
Sbjct: 179410 aattcaaaatcatacaaact 179391
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>emb|AL591762.13| Mouse DNA sequence from clone RP23-465I6 on chromosome 2, complete
             sequence
          Length = 137773

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ctttttcataatgctggaat 172
             ||||||||||||||||||||
Sbjct: 18925 ctttttcataatgctggaat 18906


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,383,854
Number of Sequences: 3902068
Number of extensions: 3383854
Number of successful extensions: 95361
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94957
Number of HSP's gapped (non-prelim): 404
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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