Clone Name | rbaet95f04 |
---|---|
Clone Library Name | barley_pub |
>DR206_PEA (P13240) Disease resistance response protein 206| Length = 184 Score = 47.8 bits (112), Expect = 1e-05 Identities = 28/68 (41%), Positives = 38/68 (55%) Frame = -1 Query: 426 SAGVGRAQGRYVWASKGNPELLVTMDVVLTSGPYAGSSVTVVGRDDIGAAVRELSVVGGT 247 S VGRAQG Y++ +K ++ VL S + G+ +T G D I A R++SV GGT Sbjct: 91 SKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGT-ITFAGADPIVAKTRDISVTGGT 149 Query: 246 GQFRMATG 223 G F M G Sbjct: 150 GDFFMHRG 157
>BAF1_KLULA (P26375) Transcription factor BAF1 (ARS-binding factor 1) (Protein| ABF1) (Bidirectionally acting factor) Length = 494 Score = 34.3 bits (77), Expect = 0.13 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +1 Query: 256 DHRQLPHRRADVVPAHHRHGGPRVGARREHHVHGHKQLRVPLGRPHVPXLRAPH 417 DH Q+ H +PAHH+H P R H H +Q ++ H + + H Sbjct: 277 DHHQVQHHHHPSIPAHHQHQLPEGQQRDVQHHHQQQQQQLQHQEQHQSHVDSGH 330
>CCG8_NEUCR (Q01306) Clock-controlled protein 8| Length = 661 Score = 32.3 bits (72), Expect = 0.48 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +1 Query: 232 HPELPRAADHRQLPHRRADVVPAHHRH-GGPRVGARREHHVHGHKQLRVPLGRP 390 H P + H H++ P HH+H P+ + +HH H +Q + P+ P Sbjct: 9 HMHSPSSQQHEHQQHQQYQQPPQHHQHYEAPQHQQQHQHHHHQQQQQQHPVPVP 62
>HPC2_YEAST (Q01448) Histone promoter control 2 protein| Length = 623 Score = 32.0 bits (71), Expect = 0.62 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = +2 Query: 95 STRQIVGEKWNRSTCTTRHGLTKTSSSRTALGWSSRTVFHSTYPVAILNCPVPPTTDSSR 274 ST Q +G K+N+ST + + LTK + + +L S +V +S ++ P S Sbjct: 271 STAQSLG-KFNKSTNSLKAALTKAPAEKVSLKRSISSVTNSDSNISSSKKPTSEKAKKSS 329 Query: 275 TAAPMSSRPTT 307 +A+ + +PTT Sbjct: 330 SASAILPKPTT 340
>L18B_LUPLU (P52779) Protein LlR18B (LlPR10.1B)| Length = 156 Score = 30.8 bits (68), Expect = 1.4 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Frame = -1 Query: 360 VTMDVVLTSGPYAGSSVTVVGR-----DDIGAAVRELSVVGGTGQFRMATGYVL 214 +T + L SGP GS + + D + AVRE + GTG F+ GYVL Sbjct: 98 ITFESKLLSGPDGGSIGKIKVKFHTKGDVLSDAVREEAKARGTGLFKAVEGYVL 151
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 30.0 bits (66), Expect = 2.4 Identities = 19/79 (24%), Positives = 31/79 (39%) Frame = +2 Query: 158 TKTSSSRTALGWSSRTVFHSTYPVAILNCPVPPTTDSSRTAAPMSSRPTTVTEDPA*GPD 337 T +SSS S T F S+ + + P P ++ + ++AP+SS T + P P Sbjct: 811 TPSSSSNITSSAPSSTPFSSSTESSSVPVPTPSSSTTESSSAPVSSSTTESSVAPVPTPS 870 Query: 338 XXXXXXXXXXXGFPLDAHT 394 P + T Sbjct: 871 SSSNITSSAPSSIPFSSTT 889
>RAGE_HUMAN (Q15109) Advanced glycosylation end product-specific receptor| precursor (Receptor for advanced glycosylation end products) Length = 404 Score = 30.0 bits (66), Expect = 2.4 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 333 GPYAGSSVTVVGRDDIGAAVRELSVVGGTGQFRMATGYVLWK 208 GP AGS VG +G L ++GG G + G +LW+ Sbjct: 327 GPTAGS----VGGSGLGTLALALGILGGLGTAALLIGVILWQ 364
>RAGE_MOUSE (Q62151) Advanced glycosylation end product-specific receptor| precursor (Receptor for advanced glycosylation end products) Length = 403 Score = 29.6 bits (65), Expect = 3.1 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = -1 Query: 375 NPELLVTMDVVLTSGPYAGSSVTVVGRDDIGAAVRELSVVGGTGQFRMATGYVLWK 208 +P + + + GP GS VG +G L ++GG G + G +LW+ Sbjct: 312 SPPVSIRVTETGDEGPAEGS----VGESGLGTLALALGILGGLGVVALLVGAILWR 363
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/49 (36%), Positives = 19/49 (38%) Frame = +1 Query: 223 PCGHPELPRAADHRQLPHRRADVVPAHHRHGGPRVGARREHHVHGHKQL 369 P H LP H PH+ PAHH H P HH H H L Sbjct: 123 PHQHQTLP---PHHPYPHQHQH--PAHHPHPQPHHQQNHPHH-HSHSHL 165
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/49 (36%), Positives = 19/49 (38%) Frame = +1 Query: 223 PCGHPELPRAADHRQLPHRRADVVPAHHRHGGPRVGARREHHVHGHKQL 369 P H LP H PH+ PAHH H P HH H H L Sbjct: 278 PHQHQTLP---PHHPYPHQHQH--PAHHPHPQPHHQQNHPHH-HSHSHL 320
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 28.9 bits (63), Expect = 5.3 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +1 Query: 268 LPHRRADV-VPAHHRHGGPRVGARREHHVHGHKQLRVPLGRPHVPXLRAPHA 420 LP R++ +PAH+ + P + H H H Q P + H + PHA Sbjct: 84 LPSARSEQGLPAHNTYSTPHAHTQAHTHAHSHPQ---PHPQSHPQSNQPPHA 132
>FFAR1_MESAU (Q76JU8) Free fatty acid receptor 1 (G-protein coupled receptor 40)| Length = 300 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = -1 Query: 399 RYVWASKGNPELLVTMDVVLTSGPYAGSSVTVVGRDDIGAAVRELSVVGGTGQF---RMA 229 R WA+ G + ++L GPY S+V D+G + R+L ++ G+ + Sbjct: 221 RAAWAAGG-----AFLTLLLCLGPYNASNVASFVNPDLGGSWRKLGLITGSWSVVLNPLV 275 Query: 228 TGYV 217 TGY+ Sbjct: 276 TGYL 279
>VGLZ_EHV1K (P32515) Glycoprotein precursor| Length = 383 Score = 28.5 bits (62), Expect = 6.9 Identities = 20/59 (33%), Positives = 28/59 (47%) Frame = +2 Query: 131 STCTTRHGLTKTSSSRTALGWSSRTVFHSTYPVAILNCPVPPTTDSSRTAAPMSSRPTT 307 ST TT + +S+S + SS T S+ P PPTT SS + +S P+T Sbjct: 22 STTTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTS-----PPTTSSSPPTSTHTSSPST 75
>P210L_HUMAN (Q5VU65) Nuclear pore membrane glycoprotein 210-like precursor| (Nucleoporin 210 kDa-like) Length = 1888 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 402 GRYVWASKGNPELLVTMDVVLTSGPYAGSSVTVVGRD 292 G + W S ++VT V+T+G G+S TV+ RD Sbjct: 494 GNFTWTSSNETVVIVTTKGVVTAGQVRGNS-TVLARD 529
>ITB4_HUMAN (P16144) Integrin beta-4 precursor (GP150) (CD104 antigen)| Length = 1822 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -3 Query: 127 VPLLPYYLPCRAPLLQ*CWIYVPCKCCSS 41 +PLL LP A LL CW Y C CC + Sbjct: 715 IPLLLLLLPLLALLLLLCWKY--CACCKA 741
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 28.5 bits (62), Expect = 6.9 Identities = 14/43 (32%), Positives = 15/43 (34%) Frame = +1 Query: 232 HPELPRAADHRQLPHRRADVVPAHHRHGGPRVGARREHHVHGH 360 HP P H PH + HH H EHH H H Sbjct: 97 HPH-PHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHH 138
>L1CA1_BRARE (Q90478) Neural cell adhesion molecule L1.1 (N-CAM L1.1) (Fragment)| Length = 1197 Score = 28.1 bits (61), Expect = 9.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -1 Query: 387 ASKGNPELLVTMDVVLTSGPYAGSSVTVVGRDDIGAAVRELSVVGGTGQ 241 +S NP L+V +G + + V +D+GAA L+V+G +G+ Sbjct: 698 SSVSNPPLMVN-----NTGTFVSFEIKVQAVNDLGAAPEPLTVIGYSGE 741 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,055,516 Number of Sequences: 219361 Number of extensions: 1057132 Number of successful extensions: 3914 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3680 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3888 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)