>gb|AY108264.1| Zea mays PCO062206 mRNA sequence
          Length = 877

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                       
Query: 269 cgccattcttgcaaaagcatgaagaaaagccatgcaaatccaattgcttgaagtatcaat 328
           ||||||||||| || |||| |||||||||||| |||||||||||||||||||||| ||||
Sbjct: 742 cgccattcttgaaatagcaagaagaaaagccaagcaaatccaattgcttgaagtaccaat 683

>gb|DQ207720.1| Zea mays cultivar B73 IDP502 marker
          Length = 529

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 269 cgccattcttgcaaaagcatgaagaaaagccatgcaaatccaattgcttgaagt 322
           ||||||||||| || |||| |||||||||||| |||||||||||||||||||||
Sbjct: 476 cgccattcttgaaatagcaagaagaaaagccaagcaaatccaattgcttgaagt 529

>gb|DQ207721.1| Zea mays cultivar inbred line Mo17 IDP502 marker
          Length = 560

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 269 cgccattcttgcaaaagcatgaagaaaagccatgcaaatccaattgcttga 319
           ||||||||||| || |||| |||||||||||| ||||||||||||||||||
Sbjct: 509 cgccattcttgaaatagcaagaagaaaagccaagcaaatccaattgcttga 559

>ref|NM_184488.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2991

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 47   tgcgaacaatcaaattggagg 67
            |||||||||||||||||||||
Sbjct: 2142 tgcgaacaatcaaattggagg 2162

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 47      tgcgaacaatcaaattggagg 67
               |||||||||||||||||||||
Sbjct: 3284336 tgcgaacaatcaaattggagg 3284356

>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1189A09
          Length = 167761

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 47     tgcgaacaatcaaattggagg 67
              |||||||||||||||||||||
Sbjct: 101965 tgcgaacaatcaaattggagg 101985

>dbj|AK072107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118K10, full
            insert sequence
          Length = 3093

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 47   tgcgaacaatcaaattggagg 67
            |||||||||||||||||||||
Sbjct: 2072 tgcgaacaatcaaattggagg 2092

>ref|NM_016603.1| Homo sapiens chromosome 5 open reading frame 5 (C5orf5), mRNA
          Length = 5470

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  tgaagaaaagccatgcaaatccaa 311
            ||||||||||||||||||| ||||
Sbjct: 4387 tgaagaaaagccatgcaaagccaa 4364

>gb|BC056887.1| Homo sapiens chromosome 5 open reading frame 5, mRNA (cDNA clone
            MGC:65022 IMAGE:6148274), complete cds
          Length = 4511

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  tgaagaaaagccatgcaaatccaa 311
            ||||||||||||||||||| ||||
Sbjct: 4044 tgaagaaaagccatgcaaagccaa 4021

>gb|AC106753.3| Homo sapiens chromosome 5 clone RP11-174H5, complete sequence
          Length = 95620

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   tgaagaaaagccatgcaaatccaa 311
             ||||||||||||||||||| ||||
Sbjct: 25883 tgaagaaaagccatgcaaagccaa 25906

>emb|CR611121.1| full-length cDNA clone CS0DF022YM01 of Fetal brain of Homo sapiens
           (human)
          Length = 1092

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 288 tgaagaaaagccatgcaaatccaa 311
           ||||||||||||||||||| ||||
Sbjct: 639 tgaagaaaagccatgcaaagccaa 616

>gb|AC006084.1|AC006084 Homo sapiens chromosome 5, Pac clone 9c13 (LBNL H127), complete
             sequence
          Length = 121739

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   tgaagaaaagccatgcaaatccaa 311
             ||||||||||||||||||| ||||
Sbjct: 79343 tgaagaaaagccatgcaaagccaa 79366

>gb|AF251038.1|AF251038 Homo sapiens GAP-like protein (N61) mRNA, complete cds
          Length = 5470

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  tgaagaaaagccatgcaaatccaa 311
            ||||||||||||||||||| ||||
Sbjct: 4387 tgaagaaaagccatgcaaagccaa 4364

>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH077A05, complete sequence
          Length = 113253

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   atgaagaaaagccatgcaaa 306
             ||||||||||||||||||||
Sbjct: 19007 atgaagaaaagccatgcaaa 19026

>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete
             sequence
          Length = 189540

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   gaaaccaactgttcttgcct 367
             ||||||||||||||||||||
Sbjct: 42201 gaaaccaactgttcttgcct 42182

>emb|AL833699.1|HSM805012 Homo sapiens mRNA; cDNA DKFZp667F249 (from clone DKFZp667F249)
          Length = 3502

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 288  tgaagaaaagccatgcaaatccaa 311
            ||||||||||||||||||| ||||
Sbjct: 2408 tgaagaaaagccatgcaaagccaa 2385


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,870,324
Number of Sequences: 3902068
Number of extensions: 3870324
Number of successful extensions: 67954
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67915
Number of HSP's gapped (non-prelim): 39
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)