ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95e10 |
|---|---|
| Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 43.1 bits (100), Expect = 4e-04 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = -2 Query: 481 RIRNESGKTLVANKVIPANWRPNTFYRSFVQY 386 R+ +ESGK ++A VIPANWRP+ Y S VQ+ Sbjct: 237 RLTSESGKKVIAKDVIPANWRPDAVYTSNVQF 268
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 42.7 bits (99), Expect = 5e-04 Identities = 17/32 (53%), Positives = 24/32 (75%) Frame = -2 Query: 481 RIRNESGKTLVANKVIPANWRPNTFYRSFVQY 386 R+ +ESGK ++A +IPANWRP+ Y S VQ+ Sbjct: 159 RLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 190
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 41.6 bits (96), Expect = 0.001 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -2 Query: 469 ESGKTLVANKVIPANWRPNTFYRSFVQY 386 ESGKT+VA+ VIPANW+P Y+S V + Sbjct: 246 ESGKTVVASNVIPANWQPGAIYKSNVNF 273
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 38.5 bits (88), Expect = 0.009 Identities = 16/32 (50%), Positives = 23/32 (71%) Frame = -2 Query: 481 RIRNESGKTLVANKVIPANWRPNTFYRSFVQY 386 R+ +E G LV + VIPANW+P+T Y S +Q+ Sbjct: 213 RLTSEGGAHLVQDDVIPANWKPDTVYTSKLQF 244
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 37.7 bits (86), Expect = 0.016 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -2 Query: 469 ESGKTLVANKVIPANWRPNTFYRSFVQY 386 ES K +VA VIPANW+P+ YRS V + Sbjct: 232 ESHKVIVAYNVIPANWKPDESYRSIVNF 259
>SOX14_DROME (P40656) Putative transcription factor SOX-14| Length = 472 Score = 34.7 bits (78), Expect = 0.14 Identities = 20/56 (35%), Positives = 26/56 (46%) Frame = +1 Query: 124 PFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSA 291 P P T H P+ P P+ +P+PAP QT +KT T P V + SA Sbjct: 42 PAPKADSTPHTLPPFSPSPSPASSPSPAPAQT-PGAQKTQSQAAITHPAAVASPSA 96
>YD134_YEAST (Q7LHD1) Protein YDR134C precursor| Length = 136 Score = 33.1 bits (74), Expect = 0.40 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = +1 Query: 133 ICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSA 291 I QYTT LP P +T +PAP T K + + TQ T Y +A Sbjct: 65 ITQYTTWCPLPTTEAPKNTTSPAPTEKPTEKPTEKPTQQGSSTQTVTSYTGAA 117
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 32.0 bits (71), Expect = 0.88 Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Frame = +1 Query: 70 SGRESVSCTPASSIFPHGPFPICQYTTHLSLPYRPRPNSTDAPAP-APNQTFFSPRKTHR 246 + + + P + P P P T + P PRP + AP AP Q +PR+ R Sbjct: 140 AAERAAAAPPPVAQAPAAPAPAAPVTPPPAAPQAPRPVAQAPVAPSAPRQD--APRQDTR 197 Query: 247 HHTPTQPDTVYNDSARRKDGPYT 315 P Q T RR D P T Sbjct: 198 AAAPGQTRTYEPSRDRRDDRPST 220
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 32.0 bits (71), Expect = 0.88 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 466 SGKTLVANKVIPANWRPNTFYRSFVQYS 383 +GKTL A V+P NW P Y S + +S Sbjct: 234 AGKTLSATDVVPRNWAPKATYSSRLNFS 261
>K0226_HUMAN (Q92622) Protein KIAA0226| Length = 972 Score = 32.0 bits (71), Expect = 0.88 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 10/94 (10%) Frame = +1 Query: 79 ESVSCTPASSIFPHGPFPICQYTTHLSLPYRPRPN------STDAPAPAPNQTFFSPRKT 240 +S++ P+S+ P + Y S ++ PN ST P P + P+++ Sbjct: 205 QSLTALPSSTYTPPNSYAQHSYFGSFSSLHQSVPNNGSERRSTSFPLSGPPR---KPQES 261 Query: 241 HRHHTPTQPDTVY----NDSARRKDGPYTPNDLT 330 H +P + T+ + SA +D P TPN+++ Sbjct: 262 RGHVSPAEDQTIQAPPVSVSALARDSPLTPNEMS 295
>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2| Length = 925 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = +1 Query: 124 PFPICQYTTHLSLPYRPRP-NSTDAPAPAPNQTFFSPRKTHRHHTPTQP 267 P P + + P P P T APAPAP T P + R P QP Sbjct: 208 PAPAAEAPQPVRPPAPPAPAKPTPAPAPAPRPTAEQPSEPRRPQPPAQP 256
>TRPD_SYMTH (Q67PJ9) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 341 Score = 31.2 bits (69), Expect = 1.5 Identities = 18/55 (32%), Positives = 30/55 (54%) Frame = -1 Query: 416 QHLLPLLRAVQLKSLYPSTGNATTQLAATVKSLGVYGPSLRRAESL*TVSGWVGV 252 +H+ P+ R + L++++ G T A + +GVY P+L E L V G +GV Sbjct: 159 KHVAPVRREIGLRNIFNLLGPLTNPAMAQAQLMGVYDPNL--TEPLARVLGNLGV 211
>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 387 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/62 (30%), Positives = 24/62 (38%) Frame = +1 Query: 88 SCTPASSIFPHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 267 + + AS+ P P + + P R P T APA AP H HH P P Sbjct: 141 AASAASAAAPAAPTSSSRAPAPTTAPARAVPTRTAAPATAP--------AAHAHHAPAHP 192 Query: 268 DT 273 T Sbjct: 193 TT 194
>CHEB1_PSESM (Q884V3) Chemotaxis response regulator protein-glutamate| methylesterase of group 1 operon (EC 3.1.1.61) Length = 390 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = +1 Query: 163 PYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRK 300 P R P+ T APA AP H HHTP P T +A+RK Sbjct: 169 PARAVPSRTVAPAAAP--------AAHAHHTPAHPTT--TGTAKRK 204
>PALH_YARLI (Q9UVF6) pH-response regulator protein palH/RIM21| Length = 632 Score = 30.8 bits (68), Expect = 2.0 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 4/78 (5%) Frame = +1 Query: 145 TTHLSLPYRPRPN----STDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDGPY 312 T L P RP T APAP P ++F + ++H + D Y G Sbjct: 67 TVKLQAPAVFRPQCALGGTRAPAPRPEESFPDWSEYQKYHHNDRRDPFY--------GSV 118 Query: 313 TPNDLTVAASCVVALPVL 366 TP T+AAS V A +L Sbjct: 119 TPIAYTIAASTVTAWMLL 136
>MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 2003 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 7/35 (20%) Frame = +1 Query: 61 KGESGRESVSCTPASSIFPH-------GPFPICQY 144 +G+ G ES+SC P S+ PH P PIC + Sbjct: 177 EGKEGCESLSCLPPVSLLPHEKDKPVAEPIPICSF 211
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 7/35 (20%) Frame = +1 Query: 61 KGESGRESVSCTPASSIFPH-------GPFPICQY 144 +G+ G ES+SC P S+ PH P PIC + Sbjct: 177 EGKEGCESLSCLPPVSLLPHEKDKPVAEPIPICSF 211
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +1 Query: 58 IKGESGRESVSCTPASSIFPHGP--FPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSP 231 + G + ESV + P P P Q T LP +P+PNS + P P P++ Sbjct: 2338 VPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKPRPPPSE----Q 2393 Query: 232 RKTHRHHT 255 RK HT Sbjct: 2394 RKAEPGHT 2401
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 30.4 bits (67), Expect = 2.6 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 466 SGKTLVANKVIPANWRPNTFYRSFVQY 386 SGK ++A VIP W P Y S V + Sbjct: 231 SGKKIIAKGVIPEKWSPGAIYHSKVNF 257
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = +1 Query: 115 PHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYN 282 P+ P P YT + Y P P T +P+PAP T SP ++TPT P Y+ Sbjct: 424 PYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYT-PSPAP---NYTPT-PSAAYS 474
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 30.4 bits (67), Expect = 2.6 Identities = 23/78 (29%), Positives = 29/78 (37%), Gaps = 14/78 (17%) Frame = +1 Query: 61 KGESGRESVSCTPASSIFPH--------------GPFPICQYTTHLSLPYRPRPNSTDAP 198 + ++G E VSC SSI P P P T L P + + P Sbjct: 2013 RNQAGPEVVSCLGTSSIPPKEGEDQKAVANSETIAPLPETSETERL-------PGTVELP 2065 Query: 199 APAPNQTFFSPRKTHRHH 252 AP P+ S R T R H Sbjct: 2066 APLPSPVSLSTRDTGRRH 2083
>SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1)| Length = 416 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = +3 Query: 45 YY--INYKRREWAGERILYACLLHFPTRPFSHLPIHDSSLTSLQTETQLHG 191 YY ++ R WA + +HFPT+ F P SL S+ Q HG Sbjct: 65 YYSMVSESTRLWAAAQSEIGYKVHFPTQQFDMGPADQQSLLSVVATCQKHG 115
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 30.0 bits (66), Expect = 3.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 466 SGKTLVANKVIPANWRPNTFYRSFVQYS 383 + KTL A VIP+NW P Y S + +S Sbjct: 241 NNKTLSATDVIPSNWVPKATYTSRLNFS 268
>ENV_MLVF5 (P03390) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E; R protein] Length = 675 Score = 30.0 bits (66), Expect = 3.3 Identities = 20/51 (39%), Positives = 24/51 (47%) Frame = +1 Query: 115 PHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 267 P GP P+ LSLP RPN PA +P + +P TPTQP Sbjct: 270 PIGPNPVL--ADQLSLP---RPNPLPKPAKSPPASNSTPTLISPSPTPTQP 315
>ESCA_DROME (P25932) Protein escargot (Protein fleabag)| Length = 470 Score = 29.6 bits (65), Expect = 4.4 Identities = 27/96 (28%), Positives = 37/96 (38%) Frame = +1 Query: 73 GRESVSCTPASSIFPHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHH 252 GR S P S H P + Q H LPY P P+ ++ TH HH Sbjct: 183 GRASSVSPPMRSEIIHRPIGVRQ---HRFLPYPQMPGY-------PSLGGYT--HTHHHH 230 Query: 253 TPTQPDTVYNDSARRKDGPYTPNDLTVAASCVVALP 360 P P A ++ Y+ +T +SC +LP Sbjct: 231 APISP-------AYSENSYYSMRSMTPESSCSSSLP 259
>INO2_YEAST (P26798) Protein INO2| Length = 304 Score = 29.3 bits (64), Expect = 5.7 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = +1 Query: 202 PAPNQTFFSPRKTHRH---HTPTQPDTVYNDSARRKDGP 309 PA NQT +P TH H H P QP ++ + K P Sbjct: 75 PADNQTHHAPLHTHAHYLNHNPHQPSMGFDQALGLKLSP 113
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 29.3 bits (64), Expect = 5.7 Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 6/77 (7%) Frame = +1 Query: 115 PHGPFPICQYTTHLSLPYRPRPNSTDAPA------PAPNQTFFSPRKTHRHHTPTQPDTV 276 P P P + P P P +T PA PAP + T + TPT P+ + Sbjct: 573 PKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKL 632 Query: 277 YNDSARRKDGPYTPNDL 327 + K P TP +L Sbjct: 633 -APTTPEKPAPTTPEEL 648
>BLI1_CAEEL (Q09457) Cuticle collagen bli-1 (Blistered cuticle protein 1)| Length = 963 Score = 29.3 bits (64), Expect = 5.7 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Frame = +1 Query: 163 PYRPR-PNSTDAPAPAPNQ--TFFSPRKTHRHHTPTQPDTVYN 282 PY P+ P ST AP +PN + ++P+ + PT P YN Sbjct: 188 PYPPQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNPRVPYN 230
>DPOL_HHV21 (P07918) DNA polymerase (EC 2.7.7.7)| Length = 1240 Score = 28.9 bits (63), Expect = 7.5 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 163 PYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQP 267 P+ PR + AP P Q F++P H T TQP Sbjct: 26 PHNPRGATQTAPPPCRRQNFYNP---HLAQTGTQP 57
>KR1_HHV11 (P04413) Serine/threonine-protein kinase (EC 2.7.11.1)| Length = 481 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 6/56 (10%) Frame = +1 Query: 58 IKGESGRESVSCTPA----SSIFPHGPF--PICQYTTHLSLPYRPRPNSTDAPAPA 207 + G GR P S +FPHGPF P P P+P+ T P+ A Sbjct: 9 VYGGQGRRKEEAVPPETKPSRVFPHGPFYTPAEDACLDSPPPETPKPSHTTPPSEA 64
>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Runt-related transcription factor-binding protein 2) (Monocytic leukemia zinc finger protein) (Zinc finger protei Length = 2004 Score = 28.9 bits (63), Expect = 7.5 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 7/36 (19%) Frame = +1 Query: 58 IKGESGRESVSCTPASSIFPH-------GPFPICQY 144 + G+ ES+SC P S+ PH P PIC + Sbjct: 176 VDGKESCESLSCLPPVSLLPHEKDKPVAEPIPICSF 211
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.9 bits (63), Expect = 7.5 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = +1 Query: 172 PRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPD-TVYNDSARRKDG 306 PRP S AP P SP H H +P ++ D ARR+ G Sbjct: 1382 PRPPSPRYDAPPPTLHHHSPHSPHSPHARHEPVLRLWGDPARRELG 1427
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 28.9 bits (63), Expect = 7.5 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +1 Query: 115 PHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQT 219 P+ P P YT + Y P P T P+PAP T Sbjct: 428 PYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYT 462
>FOXGB_HUMAN (P55315) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (HFK1) Length = 477 Score = 28.9 bits (63), Expect = 7.5 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +1 Query: 103 SSIFPHGPFPICQYTTHLSLPYRPRPNSTDAPAPAP 210 S FPH P P + S+ R +ST PAP P Sbjct: 403 SYFFPHVPHPSMTSQSSTSMSARAASSSTSPPAPRP 438
>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) Length = 716 Score = 28.9 bits (63), Expect = 7.5 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 1/66 (1%) Frame = +1 Query: 73 GRESVSCTP-ASSIFPHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRH 249 G SV+ P +S P G + T S RP T +P+P NQ SPR H Sbjct: 348 GSHSVAYLPYTASSLPKGSMKKIEITVEPS--QRPGTAITRSPSPISNQP--SPRNQHSL 403 Query: 250 HTPTQP 267 +T T P Sbjct: 404 YTATTP 409
>VGLL1_HUMAN (Q99990) Transcription cofactor vestigial-like protein 1 (Vgl-1)| (TONDU protein) Length = 258 Score = 28.5 bits (62), Expect = 9.7 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Frame = -1 Query: 470 RVRQDARRQQGHPGQLEAQ-----HLLPLLRAVQLKSLYPSTGNATTQL 339 R ++ A R+ G+PGQ+ +L P +V K LY S G+A+T L Sbjct: 180 RPQESAARENGNPGQIAGSTGLLFNLPP--GSVHYKKLYVSRGSASTSL 226
>PHR_HALSA (Q9HQ46) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 481 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 178 PNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKD 303 P D PA A + R H P PD + + S RR+D Sbjct: 428 PELRDVPADAIHSWHELSLSERRRHAPEYPDPIVDHSQRRED 469
>ULK1_MOUSE (O70405) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) (Serine/threonine-protein kinase Unc51.1) Length = 1051 Score = 28.5 bits (62), Expect = 9.7 Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 5/88 (5%) Frame = +1 Query: 70 SGRESVSCTPASSIFPHGPFPICQYTTHLSLPYRPRPNSTD-----APAPAPNQTFFSPR 234 +G ES TP+ P P C + S RP P S++ P P P Q R Sbjct: 393 AGLESHGRTPS-------PSPTCSSSPSPS--GRPGPFSSNRYGASVPIPVPTQVHNYQR 443 Query: 235 KTHRHHTPTQPDTVYNDSARRKDGPYTP 318 +PTQ T SA R+ G TP Sbjct: 444 IEQNLQSPTQQQTA-RSSAIRRSGSTTP 470
>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)| Length = 268 Score = 28.5 bits (62), Expect = 9.7 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Frame = +1 Query: 94 TPASSI-FPHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKT----HRHHTP 258 TP SS PH P SLP P P+ + +P+P+P+ SPR T R +P Sbjct: 144 TPRSSTPIPHPP--------RRSLPSPPSPSPSPSPSPSPSP---SPRSTPIPHPRKRSP 192 Query: 259 TQP 267 P Sbjct: 193 ASP 195
>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)| (Tripartite motif protein 33) Length = 1142 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 133 ICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDG 306 + +Y + LP P+P ST P+P P+ HTP +P + + +R G Sbjct: 715 LSRYISGSHLP--PQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCG 770
>MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family member 2| (APC-binding protein EB2) (End-binding protein 2) (EB2) Length = 327 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +1 Query: 163 PYRPRPNSTDAPAPAPNQTFFS-PRKTHRHHTPTQPDTVYNDSARRKDGPYTPNDLTVAA 339 P R P P P + F+ P+K+H ++PT + +A+ P P+ A+ Sbjct: 169 PVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPAAKPGSTPSRPSSAKRAS 228 Query: 340 S 342 S Sbjct: 229 S 229
>TRPD_PSEHT (Q3IKY4) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 355 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -1 Query: 443 QGHPGQLEAQHLLPLLRAVQLKSLYPSTGNATTQLAATVKSLGVYGPSL 297 Q HPG +H + + A++ ++++ G A V+ LGVY P+L Sbjct: 173 QYHPG---VRHAMGVRTALKTRTIFNILGPLVNPAAPEVQLLGVYNPNL 218
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +1 Query: 133 ICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQPDTVYNDSARRKDG 306 + +Y + LP P+P ST P+P P+ HTP +P + + +R G Sbjct: 700 LSRYISGSHLP--PQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCG 755
>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1054 Score = 28.5 bits (62), Expect = 9.7 Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Frame = +1 Query: 79 ESVSCTPASSI--FPHGPFPICQYTTHLSLPYRPRPNSTDAPAPAPNQTFFSPRKTHRHH 252 E S TP +S P + + L LP P P + P P + + RK Sbjct: 318 EPTSTTPKNSAPTTTKKPVTTTKESKFLPLPQEPEPTTAKEPPPTTKKPEPTTRKEPEPT 377 Query: 253 TPTQPDTVYNDSARRKDGPYTPND 324 TP +P+ + ++ P TP + Sbjct: 378 TPKEPE----PTTPKEPEPTTPKE 397
>GSHR_ECOLI (P06715) Glutathione reductase (EC 1.8.1.7) (GR) (GRase)| Length = 450 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = +3 Query: 108 HFPTRPFSHLPIHDSSLTSLQTETQLHGRTRTRTQPNLFLT*KDAPTPHTHPTRYSL 278 + PT FSH PI LT Q Q +G + + + F A T H P R L Sbjct: 338 NIPTVVFSHPPIGTVGLTEPQAREQ-YGDDQVKVYKSSFTAMYTAVTTHRQPCRMKL 393
>ALR_BORBU (O51182) Alanine racemase (EC 5.1.1.1)| Length = 372 Score = 28.5 bits (62), Expect = 9.7 Identities = 16/64 (25%), Positives = 28/64 (43%) Frame = +1 Query: 4 SNNILSINITALNDTI*IIKGESGRESVSCTPASSIFPHGPFPICQYTTHLSLPYRPRPN 183 SN + IN+ L + +IK + G + + T + HG I ++ ++ Y N Sbjct: 9 SNKTIIINLNNLEHNLNLIKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSN 68 Query: 184 STDA 195 DA Sbjct: 69 IEDA 72
>CN101_HUMAN (Q9NX78) Protein C14orf101| Length = 707 Score = 28.5 bits (62), Expect = 9.7 Identities = 15/55 (27%), Positives = 23/55 (41%) Frame = +3 Query: 48 YINYKRREWAGERILYACLLHFPTRPFSHLPIHDSSLTSLQTETQLHGRTRTRTQ 212 Y+N+ R W + L L HF + + S + S +E L T RT+ Sbjct: 241 YLNHARWTWGDQTTLQGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQVTNMRTE 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,749,924 Number of Sequences: 219361 Number of extensions: 1343496 Number of successful extensions: 4986 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4448 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4911 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
