ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet95e08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC134251.3| Mus musculus BAC clone RP23-430D14 from chromosome 3, complete sequence Length = 189471 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 ttcatttcttatttgtttacttg 92 ||||||||||||||||||||||| Sbjct: 166877 ttcatttcttatttgtttacttg 166899
>gb|AC157816.4| Mus musculus chromosome 3, clone RP24-255I19, complete sequence Length = 204358 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 ttcatttcttatttgtttacttg 92 ||||||||||||||||||||||| Sbjct: 88122 ttcatttcttatttgtttacttg 88144
>gb|AC102253.9| Mus musculus chromosome 3, clone RP24-175A24, complete sequence Length = 156901 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 ttcatttcttatttgtttacttg 92 ||||||||||||||||||||||| Sbjct: 98587 ttcatttcttatttgtttacttg 98609
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 tttttcatttcttatttgtttacttg 92 |||||| ||||||||||||||||||| Sbjct: 42902 tttttcttttcttatttgtttacttg 42927
>gb|AC135927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B02, complete sequence Length = 146435 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 caaacaagcaaacatatgacaa 251 |||||||||||||||||||||| Sbjct: 129755 caaacaagcaaacatatgacaa 129734
>gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0090H02, complete sequence Length = 135231 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 caaacaagcaaacatatgacaa 251 |||||||||||||||||||||| Sbjct: 11052 caaacaagcaaacatatgacaa 11031
>gb|AC121366.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111K12, complete sequence Length = 127901 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 caaacaagcaaacatatgacaa 251 |||||||||||||||||||||| Sbjct: 57599 caaacaagcaaacatatgacaa 57578
>emb|AL591030.6| Human DNA sequence from clone RP11-35J1 on chromosome 6 Contains putative novel gene, complete sequence Length = 152361 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttatttgt 85 |||||||||||||||||||||| Sbjct: 132996 tcctttttcatttcttatttgt 132975
>emb|AL139232.13| Human DNA sequence from clone RP1-237I15 on chromosome 6 Contains a novel gene, the 5' end of the gene for flavohemoprotein B5+B5R and a CpG island, complete sequence Length = 137659 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 67 tttttcatttcttatttgtttacttgtgaa 96 ||||||||||||| ||||||||||| |||| Sbjct: 120269 tttttcatttcttctttgtttacttctgaa 120240
>gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, complete sequence Length = 170361 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 tttttcatttcttatttgtttacttg 92 |||||| ||||||||||||||||||| Sbjct: 26968 tttttcttttcttatttgtttacttg 26943
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 caaacaagcaaacatatgacaa 251 |||||||||||||||||||||| Sbjct: 17383702 caaacaagcaaacatatgacaa 17383681
>emb|BX571736.6| Mouse DNA sequence from clone RP23-335L22 on chromosome X, complete sequence Length = 60106 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 cttcctttttcatttcttattt 83 |||||||||||||||||||||| Sbjct: 9999 cttcctttttcatttcttattt 10020
>ref|NM_118981.2| Arabidopsis thaliana ATA7 AT4G28395 (ATA7) mRNA, complete cds Length = 758 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tttcaacaaccttctccagat 192 ||||||||||||||||||||| Sbjct: 310 tttcaacaaccttctccagat 330
>gb|AC165075.3| Mus musculus BAC clone RP24-465N15 from chromosome 17, complete sequence Length = 180635 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 aacaagcaaacatatgacaaagagt 256 ||||||||||||| ||||||||||| Sbjct: 125262 aacaagcaaacatttgacaaagagt 125238
>gb|AC102487.6| Mus musculus chromosome 5, clone RP24-496C22, complete sequence Length = 167936 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 cacacaacaaacaagcaaaca 243 ||||||||||||||||||||| Sbjct: 69958 cacacaacaaacaagcaaaca 69938
>gb|AC115508.5| Rattus norvegicus 2 BAC CH230-355B17 (Children's Hospital Oakland Research Institute) complete sequence Length = 209019 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 aacaaacaagcaaacatatgacaaa 252 |||||||||||||||| |||||||| Sbjct: 99526 aacaaacaagcaaacaaatgacaaa 99550
>gb|AC132355.4| Mus musculus BAC clone RP24-114M18 from chromosome 9, complete sequence Length = 192351 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 65902 ttcctttttcatttcttattt 65922
>gb|AC101713.7| Mus musculus chromosome 15, clone RP23-282L9, complete sequence Length = 189145 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ttttcatttcttatttgttta 88 ||||||||||||||||||||| Sbjct: 30979 ttttcatttcttatttgttta 30999
>gb|AC144860.2| Mus musculus BAC clone RP24-133K9 from chromosome 17, complete sequence Length = 170928 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 aacaagcaaacatatgacaaagagt 256 ||||||||||||| ||||||||||| Sbjct: 131362 aacaagcaaacatttgacaaagagt 131386
>gb|AC158129.5| Mus musculus chromosome 15, clone RP24-359B13, complete sequence Length = 167206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ttttcatttcttatttgttta 88 ||||||||||||||||||||| Sbjct: 36140 ttttcatttcttatttgttta 36120
>gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186739 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgttta 88 |||||||||||||||||||| |||| Sbjct: 157547 tcctttttcatttcttattttttta 157571
>gb|AC102635.8| Mus musculus chromosome 16, clone RP23-112K20, complete sequence Length = 204382 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 gtctcacacaacaaacaagcaaaca 243 |||||||| |||||||||||||||| Sbjct: 97886 gtctcacaaaacaaacaagcaaaca 97910
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 aacaaacaagcaaacatatga 248 ||||||||||||||||||||| Sbjct: 185110 aacaaacaagcaaacatatga 185090
>emb|AL663087.14| Mouse DNA sequence from clone RP23-431M5 on chromosome 11 Contains the 5' end of the Grb10 gene for growth factor receptor bound protein 10, a nucleosome assembly protein 1-like 1 (Nap1l1) pseudogene and three CpG islands, complete sequence Length = 174389 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 161287 ttcctttttcatttcttattt 161307
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tttcaacaaccttctccagat 192 ||||||||||||||||||||| Sbjct: 159732 tttcaacaaccttctccagat 159752
>emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BAC clone F20O9 (ESSA project) Length = 93695 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tttcaacaaccttctccagat 192 ||||||||||||||||||||| Sbjct: 21815 tttcaacaaccttctccagat 21835
>gb|AC026671.18| Homo sapiens 3 BAC RP11-91M9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141674 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tttttcatttcttatttgttt 87 ||||||||||||||||||||| Sbjct: 101992 tttttcatttcttatttgttt 101972
>gb|AC069542.7| Homo sapiens chromosome 10 clone RP11-390B4, complete sequence Length = 166509 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 117679 ttcctttttcatttcttattt 117659
>gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179151 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 gtctcacacaacaaacaagcaaaca 243 |||||| |||||||||||||||||| Sbjct: 153907 gtctcaaacaacaaacaagcaaaca 153931
>gb|AC154841.2| Mus musculus BAC clone RP23-61I24 from chromosome 14, complete sequence Length = 211666 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttg 84 ||||||||||||||||||||| Sbjct: 72751 tcctttttcatttcttatttg 72771
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold Length = 380805 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 32902 ttcctttttcatttcttattt 32922 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 278785 tcctttttcatttcttattt 278766
>gb|AC155907.2| Mus musculus BAC clone RP23-250B18 from chromosome 9, complete sequence Length = 183619 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 17853 ttcctttttcatttcttattt 17833
>gb|AY084401.1| Arabidopsis thaliana clone 10704 mRNA, complete sequence Length = 630 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tttcaacaaccttctccagat 192 ||||||||||||||||||||| Sbjct: 187 tttcaacaaccttctccagat 207
>emb|AL935034.18| Zebrafish DNA sequence from clone CH211-160A3 in linkage group 12, complete sequence Length = 171213 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cacacaacaaacaagcaaaca 243 ||||||||||||||||||||| Sbjct: 7069 cacacaacaaacaagcaaaca 7089
>gb|AC125492.1| Homo sapiens 12 BAC RP11-416G10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105400 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 58172 ttcctttttcatttcttattt 58192
>dbj|BS000080.1| Pan troglodytes chromosome 22 clone:PTB-090L14, map 22, complete sequences Length = 194210 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 66 ctttttcatttcttatttgtttacttgtg 94 ||||||||| | ||||||||||||||||| Sbjct: 45009 ctttttcatatgttatttgtttacttgtg 45037
>dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14 Length = 83097 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 ttcctttttcatttcttattt 83 ||||||||||||||||||||| Sbjct: 35752 ttcctttttcatttcttattt 35732
>gb|AF037589.1|AF037589 Arabidopsis thaliana ATA7 mRNA, complete cds Length = 772 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 tttcaacaaccttctccagat 192 ||||||||||||||||||||| Sbjct: 310 tttcaacaaccttctccagat 330
>gb|AC140305.3| Mus musculus BAC clone RP23-425A11 from 6, complete sequence Length = 190535 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 cacacaacaaacaagcaaaca 243 ||||||||||||||||||||| Sbjct: 138380 cacacaacaaacaagcaaaca 138400
>emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chromosome 2, complete sequence Length = 214210 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 aacaaacaagcaaacatatgacaaa 252 |||||||||||||||| |||||||| Sbjct: 76668 aacaaacaagcaaacaaatgacaaa 76644
>gb|AC163629.5| Mus musculus BAC clone RP24-542G7 from chromosome 17, complete sequence Length = 198902 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 aacaaacaagcaaacatatga 248 ||||||||||||||||||||| Sbjct: 185621 aacaaacaagcaaacatatga 185641
>emb|AL805895.4| Mouse DNA sequence from clone RP23-64K11 on chromosome 4, complete sequence Length = 154245 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgttta 88 ||||||||||||||| ||||||||| Sbjct: 86737 tcctttttcatttctgatttgttta 86761
>gb|AC124810.14| Mus musculus chromosome 15, clone RP23-163N4, complete sequence Length = 212156 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcctcctctgcatattgca 455 |||||||||||||||||||| Sbjct: 206164 ttcctcctctgcatattgca 206145
>gb|AC103636.11| Mus musculus chromosome 5, clone RP24-373A18, complete sequence Length = 185727 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 acagaacagaggaatcaaat 51 |||||||||||||||||||| Sbjct: 10153 acagaacagaggaatcaaat 10172
>gb|AC149364.2| Phakopsora pachyrhizi clone JGIAFNA-53G12, complete sequence Length = 39084 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tttttcatttcttatttgtt 86 |||||||||||||||||||| Sbjct: 30890 tttttcatttcttatttgtt 30909
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cagaggaatcaaattcaaag 57 |||||||||||||||||||| Sbjct: 2886 cagaggaatcaaattcaaag 2867
>gb|AC127375.3| Mus musculus chromosome UNKNOWN clone RP23-48J17, complete sequence Length = 160811 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 81835 acacaacaaacaagcaaaca 81816
>gb|AC167138.6| Mus musculus chromosome 15, clone RP24-358O3, complete sequence Length = 190097 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 ttcctcctctgcatattgca 455 |||||||||||||||||||| Sbjct: 114530 ttcctcctctgcatattgca 114511
>gb|DP000017.1| Sus scrofa target 1 genomic scaffold Length = 1471440 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 1291874 tcctttttcatttcttattt 1291893 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 1170950 tcctttttcatttcttattt 1170969
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 acatggaaaagatgctcatg 218 |||||||||||||||||||| Sbjct: 344683 acatggaaaagatgctcatg 344702
>gb|AC121146.8| Mus musculus chromosome 3, clone RP24-297G3, complete sequence Length = 157105 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 99331 tcctttttcatttcttattt 99350
>gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, complete sequence Length = 190966 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 aacaaacaagcaaacatatgacaa 251 |||||||||||||||| ||||||| Sbjct: 159729 aacaaacaagcaaacaaatgacaa 159752
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||||||| |||||||| Sbjct: 460421 tcctttttcatttctaatttgttt 460398
>gb|AC126590.5| Rattus norvegicus X BAC CH230-211O11 (Children's Hospital Oakland Research Institute) complete sequence Length = 159004 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 caacaaacaagcaaacatatgaca 250 ||||||| |||||||||||||||| Sbjct: 123347 caacaaagaagcaaacatatgaca 123370
>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence Length = 161008 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 153438 tcctttttcatttcttattt 153457 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 32514 tcctttttcatttcttattt 32533
>gb|AC126437.3| Mus musculus BAC clone RP24-211B22 from chromosome 14, complete sequence Length = 167869 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ccactagtttacagaacaga 41 |||||||||||||||||||| Sbjct: 46630 ccactagtttacagaacaga 46649
>gb|AC158316.3| Mus musculus chromosome 8, clone RP23-189N8, complete sequence Length = 183192 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ttttcatttcttatttgtttactt 91 |||||||||| ||||||||||||| Sbjct: 38549 ttttcatttcatatttgtttactt 38572
>gb|AC151969.3| Mus musculus BAC clone RP24-255B1 from chromosome 9, complete sequence Length = 192458 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcaccaaatactataatta 421 |||||||||||||||||||| Sbjct: 81803 atcaccaaatactataatta 81784
>gb|AC115000.7| Mus musculus chromosome 1, clone RP24-103F2, complete sequence Length = 191603 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tccttcctttttcatttctt 79 |||||||||||||||||||| Sbjct: 133157 tccttcctttttcatttctt 133176
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome Length = 920079 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catttcttatttgtttactt 91 |||||||||||||||||||| Sbjct: 361510 catttcttatttgtttactt 361529
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome Length = 897405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catttcttatttgtttactt 91 |||||||||||||||||||| Sbjct: 345994 catttcttatttgtttactt 346013
>ref|XM_746129.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g13460) partial mRNA Length = 2445 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 aaagcatgatgaactccagg 310 |||||||||||||||||||| Sbjct: 1317 aaagcatgatgaactccagg 1336
>ref|XM_386134.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05958.1) partial mRNA Length = 1728 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 aactcctcagatcattagtc 158 |||||||||||||||||||| Sbjct: 761 aactcctcagatcattagtc 780
>emb|BX957301.6| Zebrafish DNA sequence from clone DKEY-261O24 in linkage group 7, complete sequence Length = 64006 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 ctttttcatttcttatttgtttacttgt 93 |||||||||||||| |||||||| |||| Sbjct: 23801 ctttttcatttcttttttgtttatttgt 23774
>gb|AC104103.5| Mus musculus BAC clone RP24-378I6 from chromosome 17, complete sequence Length = 137278 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 gttcctcctctgcatattgc 454 |||||||||||||||||||| Sbjct: 38100 gttcctcctctgcatattgc 38081
>gb|AC122526.4| Mus musculus BAC clone RP24-500M11 from chromosome 14, complete sequence Length = 178534 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 23569 tcctttttcatttcttattt 23550
>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence Length = 158764 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 acagaacagaggaatcaaat 51 |||||||||||||||||||| Sbjct: 20973 acagaacagaggaatcaaat 20954
>gb|AC099057.3| Homo sapiens chromosome 3 clone RP11-655N11, complete sequence Length = 164323 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 68434 tcctttttcatttcttattt 68453
>gb|AC122479.3| Mus musculus BAC clone RP24-344E5 from chromosome 14, complete sequence Length = 185254 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 aaacaagcaaacatatgacaaaga 254 |||||| ||||||||||||||||| Sbjct: 128697 aaacaaccaaacatatgacaaaga 128674
>gb|AC125405.4| Mus musculus BAC clone RP23-29M17 from 14, complete sequence Length = 190653 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 115955 tcctttttcatttcttattt 115936
>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1 of 3 of the complete sequence Length = 106598 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aacaaacaagcaaacatatg 247 |||||||||||||||||||| Sbjct: 15260 aacaaacaagcaaacatatg 15241
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence Length = 187221 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aacaaacaagcaaacatatg 247 |||||||||||||||||||| Sbjct: 101885 aacaaacaagcaaacatatg 101904
>gb|AC104675.3| Sus scrofa clone RP44-122H18, complete sequence Length = 176345 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 115675 tcctttttcatttcttattt 115694
>gb|AC023141.6| Homo sapiens BAC clone RP11-548K12 from 7, complete sequence Length = 197637 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 175085 tcctttttcatttcttattt 175066
>emb|BX571851.16| Zebrafish DNA sequence from clone DKEYP-102B12 in linkage group 9, complete sequence Length = 63718 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tgagcatgtttcaacaacct 183 |||||||||||||||||||| Sbjct: 44239 tgagcatgtttcaacaacct 44220
>gb|AC137079.9| Medicago truncatula clone mth2-27d17, complete sequence Length = 122392 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tccttcctttttcatttctt 79 |||||||||||||||||||| Sbjct: 12425 tccttcctttttcatttctt 12406
>emb|AL513323.14| Human DNA sequence from clone RP11-550P17 on chromosome 1 Contains a pentraxin pseudogene, the OR10J2P olfactory receptor, family 10, subfamily J, member 2 pseudogene, the FCER1A gene for Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide, the OR10J3 gene for olfactory receptor, family 10, subfamily J, member 3, the OR10J7P olfactory receptor, family 10, subfamily J, member 7 pseudogene, the OR10J8P olfactory receptor, family 10, subfamily J, member 8 pseudogene, the OR10J9P olfactory receptor, family 10, subfamily J, member 9 pseudogene and the 3' end of a novel gene, complete sequence Length = 168339 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tcatttcttatttgtttact 90 |||||||||||||||||||| Sbjct: 34228 tcatttcttatttgtttact 34247
>emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chromosome 13 Contains the 5' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel) and a CpG island, complete sequence Length = 87397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aacaaacaagcaaacatatg 247 |||||||||||||||||||| Sbjct: 18957 aacaaacaagcaaacatatg 18938
>emb|AL356738.14| Human DNA sequence from clone RP13-228J13 on chromosome X Contains a pseudogene similar to part of trimethyllysine hydroxylase, epsilon (TMLHE), two novel genes, the CLIC2 gene for chloride intracellular channel 2, a pseudogene similar to part of steroid-5-alpha-reductase alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) (SRD5A2), a PHD finger protein pseudogene, a PTK9 protein tyrosine kinase 9 pseudogene (PTK9), the RAB39B gene for RAB39B member RAS oncogene family, the VBP1 gene for von Hippel-Lindau binding protein 1, a pseudogene similar to part of CD84 antigen (leukocyte antigen) (CD84) and three CpG islands, complete sequence Length = 174693 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||||||| |||||||| Sbjct: 66797 tcctttttcatttctaatttgttt 66820
>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence Length = 228883 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgtttactt 91 ||||||||||||||| ||||| |||||| Sbjct: 38348 tcctttttcatttctcatttggttactt 38375
>emb|AL158140.9| Human DNA sequence from clone RP11-217H19 on chromosome Xq13.3-21.2 Contains the 3' end of a novel pseudogene, complete sequence Length = 94862 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 92357 tcctttttcatttcttattt 92376
>gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, complete sequence Length = 171582 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 accctgcaggaaagcatgat 300 |||||||||||||||||||| Sbjct: 97456 accctgcaggaaagcatgat 97437
>emb|AL121823.12|HSBB212L9 Human DNA sequence from clone RP13-212L9 on chromosome X Contains a novel gene, complete sequence Length = 185156 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ttcctttttcatttcttatt 82 |||||||||||||||||||| Sbjct: 162051 ttcctttttcatttcttatt 162070
>gb|AC157921.5| Mus musculus chromosome 1, clone RP23-129L19, complete sequence Length = 220521 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 212303 tcctttttcatttcttattt 212284
>gb|AC163327.2| Mus musculus chromosome 1, clone RP24-297J20, complete sequence Length = 136606 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 67839 acacaacaaacaagcaaaca 67820
>emb|CR954196.1| Medicago truncatula chromosome 5 clone mth2-157e5, COMPLETE SEQUENCE Length = 132419 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tccttcctttttcatttctt 79 |||||||||||||||||||| Sbjct: 121886 tccttcctttttcatttctt 121867
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 caaacttattagcatcaccaaata 412 |||||||||| ||||||||||||| Sbjct: 2088 caaacttattggcatcaccaaata 2065
>ref|XM_789951.1| PREDICTED: Strongylocentrotus purpuratus similar to M protein repeat containing protein (XE304) (LOC590343), partial mRNA Length = 1748 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 agatgctcatggtctcacacaaca 231 |||||||||||||||||| ||||| Sbjct: 870 agatgctcatggtctcacccaaca 893
>ref|XM_778230.1| PREDICTED: Strongylocentrotus purpuratus similar to M protein repeat containing protein (XE304) (LOC578041), partial mRNA Length = 1126 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 208 agatgctcatggtctcacacaaca 231 |||||||||||||||||| ||||| Sbjct: 981 agatgctcatggtctcacccaaca 1004
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 caaacttattagcatcaccaaata 412 |||||||||| ||||||||||||| Sbjct: 60389 caaacttattggcatcaccaaata 60366
>gb|DQ443577.1| HIV-1 isolate 064 from Central African Republic reverse transcriptase (pol) gene, partial cds Length = 726 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tccttcctttttcatttctt 79 |||||||||||||||||||| Sbjct: 102 tccttcctttttcatttctt 83
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gtttcaacaaccttctccag 190 |||||||||||||||||||| Sbjct: 1296011 gtttcaacaaccttctccag 1295992
>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the 5' end of the Car10 gene for carbonic anhydrase 10 and one CpG island, complete sequence Length = 203449 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccttctccagatgaggagac 200 |||||||||||||||||||| Sbjct: 3223 ccttctccagatgaggagac 3242
>emb|AL663103.4| Mouse DNA sequence from clone RP23-267D13 on chromosome 11, complete sequence Length = 238478 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 cctttttcatttcttatttgttta 88 ||||||||||||||| |||||||| Sbjct: 20751 cctttttcatttcttttttgttta 20774
>gb|AC116353.2| Homo sapiens chromosome 5 clone RP11-515C16, complete sequence Length = 220535 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 ttcctttttcatttcttatt 82 |||||||||||||||||||| Sbjct: 107368 ttcctttttcatttcttatt 107387
>gb|AC025089.9| Homo sapiens chromosome 8, clone RP11-275B19, complete sequence Length = 165870 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 61802 tcctttttcatttcttattt 61821
>gb|AC011398.8| Homo sapiens chromosome 5 clone CTB-25H4, complete sequence Length = 72754 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ttcctttttcatttcttatt 82 |||||||||||||||||||| Sbjct: 13503 ttcctttttcatttcttatt 13484
>gb|AC105254.3| Homo sapiens BAC clone RP11-647P12 from 4, complete sequence Length = 176840 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ttttcatttcttatttgtttactt 91 |||| ||||||||||||||||||| Sbjct: 155368 ttttgatttcttatttgtttactt 155391
>gb|AC160654.3| Pan troglodytes BAC clone CH251-409B17 from chromosome unknown, complete sequence Length = 164127 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 145930 tcctttttcatttcttattt 145949
>gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, complete sequence Length = 207883 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 tctcacacaacaaacaagcaaaca 243 ||||||| |||||||||||||||| Sbjct: 5295 tctcacaaaacaaacaagcaaaca 5318
>gb|AC171135.2| Helobdella robusta clone CH306-1A6, complete sequence Length = 84513 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 aaggtcaaggaagaaagatc 367 |||||||||||||||||||| Sbjct: 27705 aaggtcaaggaagaaagatc 27686
>gb|AC163757.5| Pan troglodytes BAC clone CH251-272C9 from chromosome unknown, complete sequence Length = 169213 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||||||| |||||||| Sbjct: 99920 tcctttttcatttctaatttgttt 99897
>emb|CR450381.1| Pig DNA sequence from clone PigE-108A11, complete sequence Length = 123687 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 31265 tcctttttcatttcttattt 31246
>dbj|AK076271.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632406J10 product:kinesin-like 5 (mitotic kinesin-like protein 1), full insert sequence Length = 2992 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 atcaccaaatactataatta 421 |||||||||||||||||||| Sbjct: 2944 atcaccaaatactataatta 2963
>gb|AC098982.7| Rattus norvegicus BAC CH230-46O20 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 227790 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 151554 tcctttttcatttcttattt 151573
>gb|AC119204.7| Mus musculus chromosome 1, clone RP24-188H2, complete sequence Length = 178603 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 8053 acacaacaaacaagcaaaca 8072
>dbj|AK014620.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4633402D09 product:unclassifiable, full insert sequence Length = 1145 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 417 acacaacaaacaagcaaaca 436
>gb|AC153548.4| Mus musculus 10 BAC RP23-356G7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194511 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 64 tcctttttcatttcttatttgtttactt 91 ||||||||||||||| ||||| |||||| Sbjct: 105452 tcctttttcatttctcatttggttactt 105425
>emb|AL115265.1|CNS01CA1 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aggagacatggaaaagatgc 213 |||||||||||||||||||| Sbjct: 56 aggagacatggaaaagatgc 75
>emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on chromosome X, complete sequence Length = 199391 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 124447 tcctttttcatttcttattt 124466
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 caaacttattagcatcaccaaata 412 |||||||||| ||||||||||||| Sbjct: 20106102 caaacttattggcatcaccaaata 20106125
>gb|AC073436.62| Mus musculus strain C57BL/6J chromosome 2 clone rp23-50k8, complete sequence Length = 203901 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 3612 tcctttttcatttcttattt 3593
>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16, complete sequence Length = 215878 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 acaacaaacaagcaaacata 245 |||||||||||||||||||| Sbjct: 35179 acaacaaacaagcaaacata 35198
>gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete sequence Length = 240447 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 acatggaaaagatgctcatg 218 |||||||||||||||||||| Sbjct: 21406 acatggaaaagatgctcatg 21425
>gb|AY901335.1| HIV-1 isolate 717 protease (pol) gene, partial cds Length = 702 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tccttcctttttcatttctt 79 |||||||||||||||||||| Sbjct: 135 tccttcctttttcatttctt 116
>gb|AC012512.7| Homo sapiens BAC clone RP11-561O7 from 2, complete sequence Length = 179460 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ctggaccctgcaggaaagca 296 |||||||||||||||||||| Sbjct: 79355 ctggaccctgcaggaaagca 79336
>gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 180124 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cagaggaatcaaattcaaag 57 |||||||||||||||||||| Sbjct: 88916 cagaggaatcaaattcaaag 88897
>gb|AC154600.3| Mus musculus BAC clone RP23-338O2 from chromosome 14, complete sequence Length = 173591 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cttatttgtttacttgtgaa 96 |||||||||||||||||||| Sbjct: 95938 cttatttgtttacttgtgaa 95957
>dbj|AP006184.1| Sus scrofa CC chemokine receptor genes (CCR9, CXCR6, FYCO1), complete cds, clone: 0268F11 Length = 141824 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 86716 tcctttttcatttcttattt 86697
>dbj|AP000049.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 20/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 31260 tcctttttcatttcttattt 31241
>gb|AC145345.3| Mus musculus BAC clone RP23-343D3 from chromosome 7, complete sequence Length = 212264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 46433 tcctttttcatttcttattt 46414
>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence Length = 163994 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||||||| |||||||| Sbjct: 148487 tcctttttcatttctgatttgttt 148464
>gb|AC093639.5| Homo sapiens BAC clone RP11-315C24 from 2, complete sequence Length = 153053 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 46624 tcctttttcatttcttattt 46605
>gb|AC018733.8| Homo sapiens BAC clone RP11-337H6 from 2, complete sequence Length = 163117 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 acaacaaacaagcaaacata 245 |||||||||||||||||||| Sbjct: 128536 acaacaaacaagcaaacata 128517
>gb|AC138789.1| Homo sapiens BAC clone CTD-2593N8 from 7, complete sequence Length = 155989 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 38684 tcctttttcatttcttattt 38665
>gb|AC093142.2| Homo sapiens chromosome 3 clone RP11-301D8, complete sequence Length = 210592 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 137062 tcctttttcatttcttattt 137081
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tccttcctttttcatttctt 79 |||||||||||||||||||| Sbjct: 911744 tccttcctttttcatttctt 911763
>emb|BX470225.8| Mouse DNA sequence from clone RP24-83L7 on chromosome 4, complete sequence Length = 50842 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 aaggaagaaagatcatacca 373 |||||||||||||||||||| Sbjct: 29178 aaggaagaaagatcatacca 29197
>emb|AL928798.20| Mouse DNA sequence from clone RP23-7A19 on chromosome 2, complete sequence Length = 192734 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aacaaacaagcaaacatatg 247 |||||||||||||||||||| Sbjct: 23656 aacaaacaagcaaacatatg 23637
>dbj|BS000182.1| Pan troglodytes chromosome 22 clone:PTB-301D17, map 22, complete sequences Length = 163049 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 126649 tcctttttcatttcttattt 126630
>dbj|BS000042.1| Pan troglodytes chromosome 22 clone:RP43-149B05, map 22, complete sequences Length = 163377 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ctgcaggaaagcatgatgaa 303 |||||||||||||||||||| Sbjct: 103286 ctgcaggaaagcatgatgaa 103267
>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete sequence Length = 223392 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 167469 tcctttttcatttcttattt 167450
>emb|AJ297035.1|HSA297035 Homo sapiens SDS-stable vimentin-bound DNA fragment HEF19VIM19 Length = 553 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||| |||||||||||| Sbjct: 477 tcctttttcatgtcttatttgttt 500
>emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in linkage group 1, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 62581 acacaacaaacaagcaaaca 62600
>emb|BX539333.2| Mouse DNA sequence from clone RP23-138J24 on chromosome X, complete sequence Length = 212455 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 145614 acacaacaaacaagcaaaca 145595
>emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-388E23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 206533 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 10111 acacaacaaacaagcaaaca 10130
>dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, section 62/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 10021 tcctttttcatttcttattt 10002
>gb|AC115976.13| Mus musculus chromosome 1, clone RP24-82A12, complete sequence Length = 222238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 209535 tcctttttcatttcttattt 209554
>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence Length = 201130 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 aacaaacaagcaaacatatgacaa 251 |||||||||||||||| ||||||| Sbjct: 121734 aacaaacaagcaaacaaatgacaa 121711
>gb|AC154594.2| Mus musculus BAC clone RP23-350L7 from chromosome 14, complete sequence Length = 195046 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 113229 acacaacaaacaagcaaaca 113210
>gb|AC110174.10| Mus musculus chromosome 3, clone RP23-293K21, complete sequence Length = 253469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 attcaaagtctccttccttt 69 |||||||||||||||||||| Sbjct: 18559 attcaaagtctccttccttt 18540
>dbj|AP003481.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-11E12, complete sequence Length = 138317 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ttcctttttcatttcttatt 82 |||||||||||||||||||| Sbjct: 76349 ttcctttttcatttcttatt 76330
>emb|CT033779.9| Mouse DNA sequence from clone RP24-230F21 on chromosome 9, complete sequence Length = 161997 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 76898 tcctttttcatttcttattt 76879
>emb|AL772237.12| Mouse DNA sequence from clone RP23-14I13 on chromosome 4, complete sequence Length = 169452 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ggagacatggaaaagatgct 214 |||||||||||||||||||| Sbjct: 107380 ggagacatggaaaagatgct 107361
>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome Length = 892758 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 catttcttatttgtttactt 91 |||||||||||||||||||| Sbjct: 358557 catttcttatttgtttactt 358576
>emb|CR956363.11| Pig DNA sequence from clone CH242-60A21 on chromosome 17, complete sequence Length = 208621 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 195452 tcctttttcatttcttattt 195433
>gb|AC159036.3| Pan troglodytes BAC clone CH251-318E5 from chromosome unknown, complete sequence Length = 156920 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||||||| |||||||| Sbjct: 117801 tcctttttcatttctaatttgttt 117824
>gb|AC174721.1| Gasterosteus aculeatus clone VMRC28-84C14, complete sequence Length = 125967 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 accttctccagatcaaaaag 350 |||||||||||||||||||| Sbjct: 71107 accttctccagatcaaaaag 71126
>gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, complete sequence Length = 193105 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 ttttcatttcttatttgtttactt 91 |||||||||| ||||||||||||| Sbjct: 129146 ttttcatttcatatttgtttactt 129169
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 caaacttattagcatcaccaaata 412 |||||||||| ||||||||||||| Sbjct: 20117378 caaacttattggcatcaccaaata 20117401
>emb|BX005136.8| Mouse DNA sequence from clone RP23-449C14 on chromosome 2, complete sequence Length = 178200 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 110540 tcctttttcatttcttattt 110559
>emb|BX119318.5| Human DNA sequence from clone DASS-49J3 on chromosome 6, complete sequence Length = 134747 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tcatttcttatttgtttact 90 |||||||||||||||||||| Sbjct: 100639 tcatttcttatttgtttact 100620
>gb|AC132356.3| Mus musculus BAC clone RP24-119I6 from 1, complete sequence Length = 184142 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 70665 tcctttttcatttcttattt 70684
>emb|CT030695.5| Mouse DNA sequence from clone RP23-259F10 on chromosome 9, complete sequence Length = 173589 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 56715 tcctttttcatttcttattt 56696
>emb|CR956373.10| Pig DNA sequence from clone CH242-69F10 on chromosome 17, complete sequence Length = 189898 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 93662 tcctttttcatttcttattt 93643
>gb|AC135511.4| Mus musculus BAC clone RP23-255B19 from 3, complete sequence Length = 195384 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ctttttcatttcttatttgtttac 89 ||||||||||||| |||||||||| Sbjct: 50813 ctttttcatttctaatttgtttac 50790
>emb|AL163217.2|HS21C017 Homo sapiens chromosome 21 segment HS21C017 Length = 340000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ctgcaggaaagcatgatgaa 303 |||||||||||||||||||| Sbjct: 276095 ctgcaggaaagcatgatgaa 276076
>gb|AC102591.14| Mus musculus chromosome 3, clone RP23-336B10, complete sequence Length = 216906 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 attcaaagtctccttccttt 69 |||||||||||||||||||| Sbjct: 176868 attcaaagtctccttccttt 176849
>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence Length = 171374 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 9129 tcctttttcatttcttattt 9110
>emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chromosome 4, complete sequence Length = 70508 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 62702 tcctttttcatttcttattt 62721
>emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chromosome X, complete sequence Length = 209986 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 134564 tcctttttcatttcttattt 134545
>emb|AJ421479.1| Mus musculus X-inactivation center region; segment 2/3 Length = 252150 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 caccatgtttggttcctcctctgc 447 ||||||||||||||||| |||||| Sbjct: 247398 caccatgtttggttccttctctgc 247375
>emb|AL078474.2|HSH2137 Homo sapiens chromosome 21 PAC RPCIP704H2137, complete sequence Length = 131184 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctgcaggaaagcatgatgaa 303 |||||||||||||||||||| Sbjct: 12186 ctgcaggaaagcatgatgaa 12205
>emb|AL805950.11| Mouse DNA sequence from clone RP23-134I15 on chromosome 2, complete sequence Length = 237337 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 ctcacacaacaaacaagcaa 240 |||||||||||||||||||| Sbjct: 26675 ctcacacaacaaacaagcaa 26656
>emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chromosome X, complete sequence Length = 229724 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 424 caccatgtttggttcctcctctgc 447 ||||||||||||||||| |||||| Sbjct: 34850 caccatgtttggttccttctctgc 34873
>emb|AL731811.24| Mouse DNA sequence from clone RP23-60A1 on chromosome X, complete sequence Length = 167102 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 69046 tcctttttcatttcttattt 69065
>gb|AC170592.3| Mus musculus chromosome 3, clone wi1-425G4, complete sequence Length = 41042 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 aaggtcaaggaagaaagatc 367 |||||||||||||||||||| Sbjct: 7102 aaggtcaaggaagaaagatc 7083
>gb|AC087276.13| Homo sapiens chromosome 11, clone RP11-484D2, complete sequence Length = 204109 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 tcctttttcatttcttatttgttt 87 ||||||||||| |||||||||||| Sbjct: 188041 tcctttttcatgtcttatttgttt 188064
>dbj|AB043785.1| Mus musculus AT3 gene for antithrombin, complete cds Length = 20993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 acacaacaaacaagcaaaca 243 |||||||||||||||||||| Sbjct: 980 acacaacaaacaagcaaaca 961
>dbj|AP000192.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 19/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 67847 tcctttttcatttcttattt 67828
>dbj|AP000311.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:130N6, complete sequence Length = 125242 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 31260 tcctttttcatttcttattt 31241
>emb|AL808113.7| Mouse DNA sequence from clone RP23-464N8 on chromosome X, complete sequence Length = 129039 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 50270 tcctttttcatttcttattt 50251
>dbj|AP000116.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 19/20 Length = 100000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tcctttttcatttcttattt 83 |||||||||||||||||||| Sbjct: 67847 tcctttttcatttcttattt 67828 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,949,056 Number of Sequences: 3902068 Number of extensions: 5949056 Number of successful extensions: 172366 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 171711 Number of HSP's gapped (non-prelim): 655 length of query: 455 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 433 effective length of database: 17,147,199,772 effective search space: 7424737501276 effective search space used: 7424737501276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
