ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical prot... 894 0.0
2gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, comple... 262 9e-67
3gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-... 143 6e-31
4gb|AY108161.1| Zea mays PCO128916 mRNA sequence 123 5e-25
5emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical prot... 96 1e-16
6ref|NM_197124.1| Oryza sativa (japonica cultivar-group) putative... 80 7e-12
7gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno... 80 7e-12
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
10ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative... 76 1e-10
11ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative... 74 4e-10
12dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
13dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
14emb|CR407401.1| Gallus gallus finished cDNA, clone ChEST710n2 44 0.39
15gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 40 6.1
16emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 gen... 40 6.1
17emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
18emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 40 6.1
19gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.1
20dbj|AK163516.1| Mus musculus adult male corpora quadrigemina cDN... 40 6.1
21gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome... 40 6.1
22dbj|AK021022.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 6.1
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
25gb|AY627639.1| Oryzias latipes spindlin protein C (SpinC) mRNA, ... 40 6.1
26emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.1
27gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complet... 40 6.1
28gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1

>emb|Y14201.1|HVY14201 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-12
          Length = 829

 Score =  894 bits (451), Expect = 0.0
 Identities = 451/451 (100%)
 Strand = Plus / Minus

                                                                       
Query: 2   tgctcaaccttgcgaacgttgatttattccattccaggcagtacatcaaccgtgtagtaa 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tgctcaaccttgcgaacgttgatttattccattccaggcagtacatcaaccgtgtagtaa 770

                                                                       
Query: 62  tacaagtatactactagtatatcagtacatagacgtagaccggtacacatgcatgcgatg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tacaagtatactactagtatatcagtacatagacgtagaccggtacacatgcatgcgatg 710

                                                                       
Query: 122 caacatgaaacggatcagccctgggagtacttggccttgtagtcgttccacagctggtcc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 caacatgaaacggatcagccctgggagtacttggccttgtagtcgttccacagctggtcc 650

                                                                       
Query: 182 gcgctcgtcccgaggatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gcgctcgtcccgaggatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccg 590

                                                                       
Query: 242 ttcatctccgccacgaacccgggcttgcgcgagtcgcagtagtccaggaacctggccgtc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ttcatctccgccacgaacccgggcttgcgcgagtcgcagtagtccaggaacctggccgtc 530

                                                                       
Query: 302 acgtcgtatccctcgtcccaccggctgccgccgccctccttcacccagttcgccgctacg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 acgtcgtatccctcgtcccaccggctgccgccgccctccttcacccagttcgccgctacg 470

                                                                       
Query: 362 tacccggccttgagccgcacgtagtccgcgatcccctcgaagatcccgtggtgctcgtgg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tacccggccttgagccgcacgtagtccgcgatcccctcgaagatcccgtggtgctcgtgg 410

                                          
Query: 422 tagtcctgcagcccccactgccacacgtgca 452
           |||||||||||||||||||||||||||||||
Sbjct: 409 tagtcctgcagcccccactgccacacgtgca 379



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>gb|U32431.1|TAU32431 Triticum aestivum mRNA, clone WCI-5, complete cds
          Length = 862

 Score =  262 bits (132), Expect = 9e-67
 Identities = 168/180 (93%)
 Strand = Plus / Minus

                                                                       
Query: 142 ctgggagtacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctg 201
           ||||| |||||||||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct: 699 ctgggggtacttggccttgtagtcgttccacagctggtccacgctcttccccaggatctg 640

                                                                       
Query: 202 cacgaagtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaaccc 261
           |||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 639 cacgaagtagtcgtcgctgtatccgtccttgagcttgctgttcatctccgccacgaaccc 580

                                                                       
Query: 262 gggcttgcgcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtccca 321
           || |||| | ||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 579 ggccttgagggagtcgcagtagtccaggaacttggccgtcacgtcgtacccctcgtccca 520



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 366 cggccttgagccgcacgtagtccgcgatcccctcga 401
           |||||||||||||||||||||| |||||||||||||
Sbjct: 475 cggccttgagccgcacgtagtcggcgatcccctcga 440



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                 
Query: 16  aacgttgatttattccattccaggcagtacatcaaccgtgtagtaatacaagta 69
           |||| ||||||||||||||||||||||||||| ||  ||  |||||||||||||
Sbjct: 831 aacgctgatttattccattccaggcagtacataaattgtacagtaatacaagta 778



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>gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-2) mRNA, complete cds
          Length = 894

 Score =  143 bits (72), Expect = 6e-31
 Identities = 207/252 (82%)
 Strand = Plus / Minus

                                                                       
Query: 150 acttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaagt 209
           ||||||| |||||||| ||||||||||| | | || || ||||||| |||||| ||||| 
Sbjct: 704 acttggctttgtagtccttccacagctgctgcacgttcttcccgagaatctgcgcgaaga 645

                                                                       
Query: 210 agtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttgc 269
           |||||||| |||| ||   ||| | |||| |||| |  | ||| ||||||||||||||| 
Sbjct: 644 agtcgtcggtgtacccactcttcatcttggcgttgacgtgcgcgacgaacccgggcttga 585

                                                                       
Query: 270 gcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccggctgc 329
           |||||||||||||||| |||||||| ||||| |||||||| ||||  |||||||||  ||
Sbjct: 584 gcgagtcgcagtagtcaaggaacctcgccgtgacgtcgtacccctgatcccaccggtcgc 525

                                                                       
Query: 330 cgccgccctccttcacccagttcgccgctacgtacccggccttgagccgcacgtagtccg 389
           |    |||  ||||||||||| | |||   || ||||||||||||||||||||||||| |
Sbjct: 524 cctgccccggcttcacccagtgccccggcgcgaacccggccttgagccgcacgtagtcgg 465

                       
Query: 390 cgatcccctcga 401
           ||||||||||||
Sbjct: 464 cgatcccctcga 453



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>gb|AY108161.1| Zea mays PCO128916 mRNA sequence
          Length = 648

 Score =  123 bits (62), Expect = 5e-25
 Identities = 149/178 (83%)
 Strand = Plus / Minus

                                                                       
Query: 148 gtacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaa 207
           |||||| ||||||||||| | ||||||||| | | || || | || ||||||||  ||||
Sbjct: 363 gtacttagccttgtagtcctgccacagctgctgcacggtcttgcccaggatctgggcgaa 304

                                                                       
Query: 208 gtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggctt 267
           | |||||||| ||||||||||||| | |||| |||| | |  ||| ||||| || |||||
Sbjct: 303 gaagtcgtcggtgtagccgtccttcatcttggcgttgagcagcgcgacgaagcccggctt 244

                                                                     
Query: 268 gcgcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccgg 325
           | ||||||||||||||||||||||||| ||||| |||||||| |||| ||||||||||
Sbjct: 243 gagcgagtcgcagtagtccaggaacctcgccgtgacgtcgtacccctggtcccaccgg 186



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>emb|Y14202.1|HVY14202 Hordeum vulgare mRNA for hypothetical protein, clone pBH6-17
          Length = 859

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 144/176 (81%)
 Strand = Plus / Minus

                                                                       
Query: 150 acttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaagt 209
           ||||||| |||||||| ||||||||||| |   || || ||||||| |||||| ||||| 
Sbjct: 707 acttggctttgtagtccttccacagctgctggacgttcttcccgagaatctgcgcgaaga 648

                                                                       
Query: 210 agtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttgc 269
           | || ||| |||| |||  ||| | |||| |||| | || ||| |||||||||||| || 
Sbjct: 647 aatcatcgctgtacccgctcttcatcttggcgttgagctgcgcgacgaacccgggcatga 588

                                                                   
Query: 270 gcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccgg 325
           |||||||||||||||| |||||||| ||||| | |||||||||||  |||||||||
Sbjct: 587 gcgagtcgcagtagtcgaggaacctcgccgtgatgtcgtatccctgatcccaccgg 532



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                 
Query: 364 cccggccttgagccgcacgtagtccgcgatcccctcga 401
           |||||||||||||||||||||||| |||||||||||||
Sbjct: 493 cccggccttgagccgcacgtagtcggcgatcccctcga 456



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>ref|NM_197124.1| Oryza sativa (japonica cultivar-group) putative secretory protein
           (OSJNBa0051D19.12), mRNA
          Length = 783

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                   
Query: 270 gcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccgg 325
           |||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||
Sbjct: 646 gcgagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccgg 591



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 196 gatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccac 255
           |||||| |||||| |||||||| |||| |||||||| | ||||||||| | || ||||||
Sbjct: 726 gatctggacgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccac 667

                 
Query: 256 gaaccc 261
           ||||||
Sbjct: 666 gaaccc 661



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>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 270   gcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccgg 325
             |||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||
Sbjct: 90382 gcgagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccgg 90327



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 130/158 (82%), Gaps = 2/158 (1%)
 Strand = Plus / Minus

                                                                         
Query: 148   gtacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaa 207
             ||||||||||||||| || | ||||||||| | | || || |||||  ||||||||||||
Sbjct: 92863 gtacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaa 92804

                                                                         
Query: 208   gtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggctt 267
             ||||||| | ||||| |||||||| | |||| | || || || || |||||||| |||||
Sbjct: 92803 gtagtcgacattgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggctt 92744

                                                   
Query: 268   g-cgcgagtcgcagtagtccaggaacctggccgtcacg 304
             | |||  |||||||||||| | |||||| |||||||||
Sbjct: 92743 gacgc-tgtcgcagtagtcgaagaacctcgccgtcacg 92707



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 129/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Plus

                                                                         
Query: 149   tacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaag 208
             |||||||||||||| || | ||||||||| | | || || |||||  |||||||||||||
Sbjct: 86583 tacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaag 86642

                                                                         
Query: 209   tagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttg 268
             |||||| ||||||| || | ||| |||||  ||||||  || || |||||||| ||||||
Sbjct: 86643 tagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctggcttg 86702

                                                  
Query: 269   -cgcgagtcgcagtagtccaggaacctggccgtcacg 304
              |||  |||||||||||| | |||||| |||||||||
Sbjct: 86703 acgc-tgtcgcagtagtcgaagaacctcgccgtcacg 86738



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                            
Query: 421   gtagtcctgcagcccccactgccacacgtgc 451
             |||||||||||||||||||||||||||||||
Sbjct: 92590 gtagtcctgcagcccccactgccacacgtgc 92560



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 196   gatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccac 255
             |||||| |||||| |||||||| |||| |||||||| | ||||||||| | || ||||||
Sbjct: 90462 gatctggacgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccac 90403

                   
Query: 256   gaaccc 261
             ||||||
Sbjct: 90402 gaaccc 90397



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                         
Query: 425   tcctgcagcccccactgccacacgtgca 452
             ||||||||||||||||||||||||||||
Sbjct: 86859 tcctgcagcccccactgccacacgtgca 86886



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 270      gcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccgg 325
                |||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||
Sbjct: 18122746 gcgagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccgg 18122801



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 130/158 (82%), Gaps = 2/158 (1%)
 Strand = Plus / Plus

                                                                            
Query: 148      gtacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaa 207
                ||||||||||||||| || | ||||||||| | | || || |||||  ||||||||||||
Sbjct: 18120265 gtacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaa 18120324

                                                                            
Query: 208      gtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggctt 267
                ||||||| | ||||| |||||||| | |||| | || || || || |||||||| |||||
Sbjct: 18120325 gtagtcgacattgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggctt 18120384

                                                      
Query: 268      g-cgcgagtcgcagtagtccaggaacctggccgtcacg 304
                | |||  |||||||||||| | |||||| |||||||||
Sbjct: 18120385 gacgc-tgtcgcagtagtcgaagaacctcgccgtcacg 18120421



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 129/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Minus

                                                                            
Query: 149      tacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaag 208
                |||||||||||||| || | ||||||||| | | || || |||||  |||||||||||||
Sbjct: 18126545 tacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaag 18126486

                                                                            
Query: 209      tagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttg 268
                |||||| ||||||| || | ||| |||||  ||||||  || || |||||||| ||||||
Sbjct: 18126485 tagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctggcttg 18126426

                                                     
Query: 269      -cgcgagtcgcagtagtccaggaacctggccgtcacg 304
                 |||  |||||||||||| | |||||| |||||||||
Sbjct: 18126425 acgc-tgtcgcagtagtcgaagaacctcgccgtcacg 18126390



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 421      gtagtcctgcagcccccactgccacacgtgc 451
                |||||||||||||||||||||||||||||||
Sbjct: 18120538 gtagtcctgcagcccccactgccacacgtgc 18120568



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 196      gatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccac 255
                |||||| |||||| |||||||| |||| |||||||| | ||||||||| | || ||||||
Sbjct: 18122666 gatctggacgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccac 18122725

                      
Query: 256      gaaccc 261
                ||||||
Sbjct: 18122726 gaaccc 18122731



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 425      tcctgcagcccccactgccacacgtgca 452
                ||||||||||||||||||||||||||||
Sbjct: 18126269 tcctgcagcccccactgccacacgtgca 18126242



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                        
Query: 270      gcgagtcgcagtagtccaggaacctggccgtcacgtcgtatccctcgtcccaccgg 325
                |||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||
Sbjct: 18131999 gcgagtcgcagtagtcgaggaacctcgccgtcacgtcgtacccctggtcccaccgg 18132054



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 130/158 (82%), Gaps = 2/158 (1%)
 Strand = Plus / Plus

                                                                            
Query: 148      gtacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaa 207
                ||||||||||||||| || | ||||||||| | | || || |||||  ||||||||||||
Sbjct: 18129518 gtacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaa 18129577

                                                                            
Query: 208      gtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggctt 267
                ||||||| | ||||| |||||||| | |||| | || || || || |||||||| |||||
Sbjct: 18129578 gtagtcgacattgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggctt 18129637

                                                      
Query: 268      g-cgcgagtcgcagtagtccaggaacctggccgtcacg 304
                | |||  |||||||||||| | |||||| |||||||||
Sbjct: 18129638 gacgc-tgtcgcagtagtcgaagaacctcgccgtcacg 18129674



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 129/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Minus

                                                                            
Query: 149      tacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaag 208
                |||||||||||||| || | ||||||||| | | || || |||||  |||||||||||||
Sbjct: 18135798 tacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaag 18135739

                                                                            
Query: 209      tagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttg 268
                |||||| ||||||| || | ||| |||||  ||||||  || || |||||||| ||||||
Sbjct: 18135738 tagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctggcttg 18135679

                                                     
Query: 269      -cgcgagtcgcagtagtccaggaacctggccgtcacg 304
                 |||  |||||||||||| | |||||| |||||||||
Sbjct: 18135678 acgc-tgtcgcagtagtcgaagaacctcgccgtcacg 18135643



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 421      gtagtcctgcagcccccactgccacacgtgc 451
                |||||||||||||||||||||||||||||||
Sbjct: 18129791 gtagtcctgcagcccccactgccacacgtgc 18129821



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                            
Query: 196      gatctgcacgaagtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccac 255
                |||||| |||||| |||||||| |||| |||||||| | ||||||||| | || ||||||
Sbjct: 18131919 gatctggacgaagaagtcgtcgctgtatccgtccttcatcttgccgttgagctgcgccac 18131978

                      
Query: 256      gaaccc 261
                ||||||
Sbjct: 18131979 gaaccc 18131984



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 425      tcctgcagcccccactgccacacgtgca 452
                ||||||||||||||||||||||||||||
Sbjct: 18135522 tcctgcagcccccactgccacacgtgca 18135495



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>ref|NM_197123.1| Oryza sativa (japonica cultivar-group) putative secretory protein
           (OSJNBa0051D19.13), mRNA
          Length = 702

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 130/158 (82%), Gaps = 2/158 (1%)
 Strand = Plus / Minus

                                                                       
Query: 148 gtacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaa 207
           ||||||||||||||| || | ||||||||| | | || || |||||  ||||||||||||
Sbjct: 693 gtacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaa 634

                                                                       
Query: 208 gtagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggctt 267
           ||||||| | ||||| |||||||| | |||| | || || || || |||||||| |||||
Sbjct: 633 gtagtcgacattgtacccgtccttcaacttggcattgatgtcggcgacgaaccctggctt 574

                                                 
Query: 268 g-cgcgagtcgcagtagtccaggaacctggccgtcacg 304
           | |||  |||||||||||| | |||||| |||||||||
Sbjct: 573 gacgc-tgtcgcagtagtcgaagaacctcgccgtcacg 537



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                          
Query: 421 gtagtcctgcagcccccactgccacacgtgc 451
           |||||||||||||||||||||||||||||||
Sbjct: 420 gtagtcctgcagcccccactgccacacgtgc 390



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>ref|NM_197125.1| Oryza sativa (japonica cultivar-group) putative basic secretory
           protein (OSJNBa0051D19.25), mRNA
          Length = 690

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 129/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Minus

                                                                       
Query: 149 tacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaag 208
           |||||||||||||| || | ||||||||| | | || || |||||  |||||||||||||
Sbjct: 680 tacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaag 621

                                                                       
Query: 209 tagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttg 268
           |||||| ||||||| || | ||| |||||  ||||||  || || |||||||| ||||||
Sbjct: 620 tagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctggcttg 561

                                                
Query: 269 -cgcgagtcgcagtagtccaggaacctggccgtcacg 304
            |||  |||||||||||| | |||||| |||||||||
Sbjct: 560 acgc-tgtcgcagtagtcgaagaacctcgccgtcacg 525



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 425 tcctgcagcccccactgccacacgtgca 452
           ||||||||||||||||||||||||||||
Sbjct: 404 tcctgcagcccccactgccacacgtgca 377



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>dbj|AK100816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122C23, full
           insert sequence
          Length = 856

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 129/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Minus

                                                                       
Query: 149 tacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaag 208
           |||||||||||||| || | ||||||||| | | || || |||||  |||||||||||||
Sbjct: 700 tacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaag 641

                                                                       
Query: 209 tagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttg 268
           |||||| ||||||| || | ||| |||||  ||||||  || || |||||||| ||||||
Sbjct: 640 tagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctggcttg 581

                                                
Query: 269 -cgcgagtcgcagtagtccaggaacctggccgtcacg 304
            |||  |||||||||||| | |||||| |||||||||
Sbjct: 580 acgc-tgtcgcagtagtcgaagaacctcgccgtcacg 545



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 425 tcctgcagcccccactgccacacgtgca 452
           ||||||||||||||||||||||||||||
Sbjct: 424 tcctgcagcccccactgccacacgtgca 397



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>dbj|AK059607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-F02, full
           insert sequence
          Length = 852

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 129/157 (82%), Gaps = 2/157 (1%)
 Strand = Plus / Minus

                                                                       
Query: 149 tacttggccttgtagtcgttccacagctggtccgcgctcgtcccgaggatctgcacgaag 208
           |||||||||||||| || | ||||||||| | | || || |||||  |||||||||||||
Sbjct: 696 tacttggccttgtaatcctgccacagctgctgcacggtcttcccggtgatctgcacgaag 637

                                                                       
Query: 209 tagtcgtcgttgtagccgtccttgagcttgccgttcatctccgccacgaacccgggcttg 268
           |||||| ||||||| || | ||| |||||  ||||||  || || |||||||| ||||||
Sbjct: 636 tagtcgacgttgtacccattcttcagcttagcgttcaggtcggcaacgaaccctggcttg 577

                                                
Query: 269 -cgcgagtcgcagtagtccaggaacctggccgtcacg 304
            |||  |||||||||||| | |||||| |||||||||
Sbjct: 576 acgc-tgtcgcagtagtcgaagaacctcgccgtcacg 541



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 425 tcctgcagcccccactgccacacgtgca 452
           ||||||||||||||||||||||||||||
Sbjct: 420 tcctgcagcccccactgccacacgtgca 393



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>emb|CR407401.1| Gallus gallus finished cDNA, clone ChEST710n2
          Length = 1096

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 325 gctgccgccgccctccttcacc 346
           ||||||||||||||||||||||
Sbjct: 169 gctgccgccgccctccttcacc 148



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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gtagtcgtcgttgtagccgt 227
              ||||||||||||||||||||
Sbjct: 476612 gtagtcgtcgttgtagccgt 476631



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>emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 genomic sequences
          Length = 74658

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tactactagtatatcagtac 89
             ||||||||||||||||||||
Sbjct: 48610 tactactagtatatcagtac 48591



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>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17,
            complete sequence
          Length = 167269

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gctgccgccgccctccttca 344
            ||||||||||||||||||||
Sbjct: 9609 gctgccgccgccctccttca 9628



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>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
              complete sequence
          Length = 127506

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    gctgccgccgccctccttca 344
              ||||||||||||||||||||
Sbjct: 115428 gctgccgccgccctccttca 115447



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 321     accggctgccgccgccctcc 340
               ||||||||||||||||||||
Sbjct: 4769087 accggctgccgccgccctcc 4769106



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>dbj|AK163516.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230331C12
           product:exportin 4, full insert sequence
          Length = 1896

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 ccggctgccgccgccctcct 341
           ||||||||||||||||||||
Sbjct: 60  ccggctgccgccgccctcct 79



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>gb|AC154504.2| Mus musculus BAC clone RP24-92H14 from chromosome 14, complete sequence
          Length = 234665

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    ccggctgccgccgccctcct 341
              ||||||||||||||||||||
Sbjct: 124818 ccggctgccgccgccctcct 124837



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>dbj|AK021022.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430309A01 product:exportin 4,
           full insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 322 ccggctgccgccgccctcct 341
           ||||||||||||||||||||
Sbjct: 254 ccggctgccgccgccctcct 273



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 325      gctgccgccgccctccttca 344
                ||||||||||||||||||||
Sbjct: 27846756 gctgccgccgccctccttca 27846775



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 322      ccggctgccgccgccctcct 341
                ||||||||||||||||||||
Sbjct: 28814698 ccggctgccgccgccctcct 28814717



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>gb|AY627639.1| Oryzias latipes spindlin protein C (SpinC) mRNA, complete cds
          Length = 1706

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 156 ccttgtagtcgttccacagctggt 179
           |||||||||||| |||||||||||
Sbjct: 567 ccttgtagtcgtcccacagctggt 544



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>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete
              sequence
          Length = 131195

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     tactactagtatatcagtac 89
              ||||||||||||||||||||
Sbjct: 110786 tactactagtatatcagtac 110805



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>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence
          Length = 178801

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    tcctgcagcccccactgcca 444
              ||||||||||||||||||||
Sbjct: 120063 tcctgcagcccccactgcca 120082



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>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   ccggctgccgccgccctcct 341
             ||||||||||||||||||||
Sbjct: 58769 ccggctgccgccgccctcct 58750


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,505,530
Number of Sequences: 3902068
Number of extensions: 2505530
Number of successful extensions: 46779
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46484
Number of HSP's gapped (non-prelim): 283
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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