ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom... 76 1e-10
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 76 1e-10
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 76 1e-10
5dbj|AK111313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
6dbj|AK059787.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
7gb|AY654597.1| Sebastes maliger microsatellite Sma5 sequence 42 1.4
8gb|AC144817.3| Mus musculus BAC clone RP24-265M7 from chromosome... 42 1.4
9emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, com... 42 1.4
10gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Canc... 42 1.4
11gb|AC010255.9|AC010255 Homo sapiens chromosome 5 clone CTC-441N1... 42 1.4
12gb|AC159136.7| Mus musculus 10 BAC RP23-58L22 (Roswell Park Canc... 42 1.4
13gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, comple... 42 1.4
14dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.4
15gb|AC170753.7| Mus musculus BAC RP24-547D11 (Roswell Park Cance... 42 1.4
16gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.6
17gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynt... 40 5.6
18gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complet... 40 5.6
19gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete... 40 5.6
20gb|AC148478.2| X. tropicalis BAC clone ISB1-157C4 containing the... 40 5.6
21gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, com... 40 5.6
22emb|CR538722.1| M.truncatula DNA sequence from clone MTH2-11A20 ... 40 5.6
23gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome... 40 5.6
24emb|BX004807.10| Human DNA sequence from clone RP11-565D17 on ch... 40 5.6
25gb|AC125576.4| Rattus norvegicus 18 BAC CH230-9F9 (Children's Ho... 40 5.6
26emb|AL157760.9| Human DNA sequence from clone RP11-113P14 on chr... 40 5.6
27emb|AL096708.34|HS1179L24 Human DNA sequence from clone RP5-1179... 40 5.6
28gb|AY102699.1| Drosophila melanogaster SD09582 full insert cDNA 40 5.6
29gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory prote... 40 5.6
30ref|NM_142801.1| Drosophila melanogaster CG5346-RA (CG5346), mRNA 40 5.6
31gb|AC098477.2| Homo sapiens chromosome 3 clone RP11-733H11, comp... 40 5.6
32gb|AC095047.2| Homo sapiens BAC clone RP11-219G14 from 4, comple... 40 5.6
33gb|AY075378.1| Drosophila melanogaster LD08233 full length cDNA 40 5.6
34gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complet... 40 5.6
35gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.6
36gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosom... 40 5.6
37dbj|AK079704.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 5.6
38gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, comp... 40 5.6
39ref|XM_393032.2| PREDICTED: Apis mellifera similar to eukaryotic... 40 5.6
40gb|AY820108.1| Myomys yemeni endogenous virus class II-related c... 40 5.6
41emb|BX005221.7| Zebrafish DNA sequence from clone DKEY-63H22 in ... 40 5.6
42gb|AY104298.1| Zea mays PCO095355 mRNA sequence 40 5.6
43gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77... 40 5.6
44emb|AL806514.8| Mouse DNA sequence from clone RP23-18D24 on chro... 40 5.6 
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
              sequence
          Length = 138345

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                          
Query: 226    acctcggcgacggggaccaggccaagctcccggatcaccccggccgcgccgcggagcggc 285
              ||||| || ||||||| |||||||||||||||||| |||||||| |||||||||||| ||
Sbjct: 134603 acctcagccacggggagcaggccaagctcccggataaccccggcagcgccgcggagctgc 134662

                    
Query: 286    tcgccg 291
               |||||
Sbjct: 134663 gcgccg 134668
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                            
Query: 226      acctcggcgacggggaccaggccaagctcccggatcaccccggccgcgccgcggagcggc 285
                ||||| || ||||||| |||||||||||||||||| |||||||| |||||||||||| ||
Sbjct: 27434396 acctcagccacggggagcaggccaagctcccggataaccccggcagcgccgcggagctgc 27434455

                      
Query: 286      tcgccg 291
                 |||||
Sbjct: 27434456 gcgccg 27434461
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                            
Query: 226      acctcggcgacggggaccaggccaagctcccggatcaccccggccgcgccgcggagcggc 285
                ||||| || ||||||| |||||||||||||||||| |||||||| |||||||||||| ||
Sbjct: 27525719 acctcagccacggggagcaggccaagctcccggataaccccggcagcgccgcggagctgc 27525778

                      
Query: 286      tcgccg 291
                 |||||
Sbjct: 27525779 gcgccg 27525784
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
              sequence
          Length = 123406

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                          
Query: 226    acctcggcgacggggaccaggccaagctcccggatcaccccggccgcgccgcggagcggc 285
              ||||| || ||||||| |||||||||||||||||| |||||||| |||||||||||| ||
Sbjct: 116118 acctcagccacggggagcaggccaagctcccggataaccccggcagcgccgcggagctgc 116059

                    
Query: 286    tcgccg 291
               |||||
Sbjct: 116058 gcgccg 116053
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>dbj|AK111313.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-C05, full
           insert sequence
          Length = 1014

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 226 acctcggcgacggggaccaggccaagctcccggatcaccccggccgcgccgcggagcggc 285
           ||||| || ||||||| |||||||||||||||||| |||||||| |||||||||||| ||
Sbjct: 564 acctcagccacggggagcaggccaagctcccggataaccccggcagcgccgcggagctgc 505

                 
Query: 286 tcgccg 291
            |||||
Sbjct: 504 gcgccg 499
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>dbj|AK059787.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D10, full
           insert sequence
          Length = 961

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 235 acggggaccaggccaagctcccggatcaccccggccgcgccgcggagcggctcgccg 291
           ||||||| |||||||||||||||||| |||||||| |||||||||||| || |||||
Sbjct: 559 acggggagcaggccaagctcccggataaccccggcagcgccgcggagctgcgcgccg 503
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>gb|AY654597.1| Sebastes maliger microsatellite Sma5 sequence
          Length = 375

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 25  tattgaacttgaaatatgcaattat 49
           |||||||||||||||||| ||||||
Sbjct: 100 tattgaacttgaaatatggaattat 76
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>gb|AC144817.3| Mus musculus BAC clone RP24-265M7 from chromosome 10, complete sequence
          Length = 141466

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    cttctctccttttctaccaag 108
             |||||||||||||||||||||
Sbjct: 74499 cttctctccttttctaccaag 74479
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>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4
          Length = 282610

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   atgtaggagtagtataataaa 164
             |||||||||||||||||||||
Sbjct: 54118 atgtaggagtagtataataaa 54138
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>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 224664

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    cttctctccttttctaccaag 108
             |||||||||||||||||||||
Sbjct: 70241 cttctctccttttctaccaag 70261
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>gb|AC010255.9|AC010255 Homo sapiens chromosome 5 clone CTC-441N14, complete sequence
          Length = 215111

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    ccaaccatatatcatatatgt 147
              |||||||||||||||||||||
Sbjct: 156323 ccaaccatatatcatatatgt 156343
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>gb|AC159136.7| Mus musculus 10 BAC RP23-58L22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207997

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 88    cttctctccttttctaccaag 108
             |||||||||||||||||||||
Sbjct: 46308 cttctctccttttctaccaag 46288
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>gb|AC008279.3| Homo sapiens BAC clone RP11-427F22 from 2, complete sequence
          Length = 157258

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 123  tttgccaaccatatatcatat 143
            |||||||||||||||||||||
Sbjct: 6854 tttgccaaccatatatcatat 6874
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 252     ctcccggatcaccccggccgc 272
               |||||||||||||||||||||
Sbjct: 2429227 ctcccggatcaccccggccgc 2429247



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 276     gcggagcggctcgccgaggc 295
               ||||||||||||||||||||
Sbjct: 1956603 gcggagcggctcgccgaggc 1956622
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>gb|AC170753.7| Mus musculus  BAC RP24-547D11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 234156

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 88     cttctctccttttctaccaag 108
              |||||||||||||||||||||
Sbjct: 103636 cttctctccttttctaccaag 103656
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 393     caccatgctggtgatggagaccca 416
               ||||||||||| ||||||||||||
Sbjct: 2610209 caccatgctggagatggagaccca 2610186
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>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster,
             complete sequence
          Length = 99892

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   cgcggagcggctcgccgagg 294
             ||||||||||||||||||||
Sbjct: 48232 cgcggagcggctcgccgagg 48251
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>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence
          Length = 164501

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    aagaactttggacgtcgaag 217
              ||||||||||||||||||||
Sbjct: 103037 aagaactttggacgtcgaag 103018
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>gb|AC008196.8| Drosophila melanogaster clone BACR30J14, complete sequence
          Length = 179562

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    aagaactttggacgtcgaag 217
              ||||||||||||||||||||
Sbjct: 155750 aagaactttggacgtcgaag 155731
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>gb|AC148478.2| X. tropicalis BAC clone ISB1-157C4 containing the sox9 gene, complete
             sequence
          Length = 76760

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   atcatatatgtaggagtagt 156
             ||||||||||||||||||||
Sbjct: 55236 atcatatatgtaggagtagt 55217
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>gb|AC102639.5| Mus musculus chromosome 3, clone RP23-461I15, complete sequence
          Length = 199243

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    attgttttattgaacttgaa 37
             ||||||||||||||||||||
Sbjct: 34801 attgttttattgaacttgaa 34820
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>emb|CR538722.1| M.truncatula DNA sequence from clone MTH2-11A20 on chromosome 3,
             complete sequence
          Length = 118829

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   caaccatatatcatatatgt 147
             ||||||||||||||||||||
Sbjct: 43646 caaccatatatcatatatgt 43627
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>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     attgttttattgaacttgaa 37
              ||||||||||||||||||||
Sbjct: 159519 attgttttattgaacttgaa 159538
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>emb|BX004807.10| Human DNA sequence from clone RP11-565D17 on chromosome 1 Contains the
             5' end of the ITGB3BP gene for integrin beta 3 binding
             protein (beta3-endonexin), the 5' end of a novel gene
             (KIAA1799) and a CpG island, complete sequence
          Length = 78203

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    ttattgaacttgaaatatgcaatt 47
             |||||||||||||||||| |||||
Sbjct: 75750 ttattgaacttgaaatattcaatt 75773
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>gb|AC125576.4| Rattus norvegicus 18 BAC CH230-9F9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237754

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      atataaaagattgttttatt 28
              ||||||||||||||||||||
Sbjct: 216737 atataaaagattgttttatt 216718
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>emb|AL157760.9| Human DNA sequence from clone RP11-113P14 on chromosome 13 Contains the
             3' end of the DCAMKL1 gene for doublecortin and CaM
             kinase-like 1 (DCLK KIAA0369), complete sequence
          Length = 108649

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    tccttttctaccaagaatgg 113
             ||||||||||||||||||||
Sbjct: 82290 tccttttctaccaagaatgg 82271
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>emb|AL096708.34|HS1179L24 Human DNA sequence from clone RP5-1179L24 on chromosome 6q24.3-25.3
             Contains the PPP1R14C gene for protein phosphatase 1
             regulatory (inhibitor) subunit 14C (KEPI NY-BR-81
             CPI17-like), complete sequence
          Length = 107104

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   aaccatatatcatatatgta 148
             ||||||||||||||||||||
Sbjct: 82228 aaccatatatcatatatgta 82247
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>gb|AY102699.1| Drosophila melanogaster SD09582 full insert cDNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 aagaactttggacgtcgaag 217
           ||||||||||||||||||||
Sbjct: 419 aagaactttggacgtcgaag 438
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>gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (KEPI) gene, complete
              cds
          Length = 168856

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    aaccatatatcatatatgta 148
              ||||||||||||||||||||
Sbjct: 143980 aaccatatatcatatatgta 143999
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>ref|NM_142801.1| Drosophila melanogaster CG5346-RA (CG5346), mRNA
          Length = 1924

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 198 aagaactttggacgtcgaag 217
           ||||||||||||||||||||
Sbjct: 418 aagaactttggacgtcgaag 437
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>gb|AC098477.2| Homo sapiens chromosome 3 clone RP11-733H11, complete sequence
          Length = 198468

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    ctaccaagaatggtgcaaat 120
              ||||||||||||||||||||
Sbjct: 112687 ctaccaagaatggtgcaaat 112668
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>gb|AC095047.2| Homo sapiens BAC clone RP11-219G14 from 4, complete sequence
          Length = 72660

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 24   ttattgaacttgaaatatgc 43
            ||||||||||||||||||||
Sbjct: 2589 ttattgaacttgaaatatgc 2570
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>gb|AY075378.1| Drosophila melanogaster LD08233 full length cDNA
          Length = 1891

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  aagaactttggacgtcgaag 217
            ||||||||||||||||||||
Sbjct: 1506 aagaactttggacgtcgaag 1487
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>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence
          Length = 154382

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 87   tcttctctccttttctaccaagaa 110
            ||||||||||||||||| ||||||
Sbjct: 2823 tcttctctccttttctatcaagaa 2846
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     cggagcggctcgccgaggcc 296
               ||||||||||||||||||||
Sbjct: 3074731 cggagcggctcgccgaggcc 3074712



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    gccgcggagcggctcgccga 292
              ||||||||||||||||||||
Sbjct: 119044 gccgcggagcggctcgccga 119025
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>gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence
          Length = 205466

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     ctctcatggtttcttctctc 95
              ||||||||||||||||||||
Sbjct: 185909 ctctcatggtttcttctctc 185890
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>dbj|AK079704.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430019G17 product:unclassifiable, full
           insert sequence
          Length = 2638

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  ctctcatggtttcttctctc 95
           ||||||||||||||||||||
Sbjct: 455 ctctcatggtttcttctctc 436
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>gb|AC093469.11| Mus musculus chromosome 7, clone RP23-21I4, complete sequence
          Length = 215022

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ctctcatggtttcttctctc 95
             ||||||||||||||||||||
Sbjct: 58957 ctctcatggtttcttctctc 58938
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>ref|XM_393032.2| PREDICTED: Apis mellifera similar to eukaryotic translation
            initiation factor 2 gamma (LOC409526), mRNA
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   ttttattgaacttgaaatat 41
            ||||||||||||||||||||
Sbjct: 1124 ttttattgaacttgaaatat 1143
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>gb|AY820108.1| Myomys yemeni endogenous virus class II-related clone RV-Yemeni
           mouse pro/pol pseudogene, partial sequence
          Length = 928

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   tagatataaaagattgtttt 25
           ||||||||||||||||||||
Sbjct: 696 tagatataaaagattgtttt 715
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>emb|BX005221.7| Zebrafish DNA sequence from clone DKEY-63H22 in linkage group 7,
             complete sequence
          Length = 100694

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   aaccatatatcatatatgta 148
             ||||||||||||||||||||
Sbjct: 86563 aaccatatatcatatatgta 86582
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>gb|AY104298.1| Zea mays PCO095355 mRNA sequence
          Length = 950

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 235 acggggaccaggccaagctcccggatcaccccggccgcgccgcg 278
           ||||||| ||| |||||||| | ||| ||||| |||||||||||
Sbjct: 587 acggggagcagcccaagctctccgatgaccccagccgcgccgcg 544
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>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete
              sequence
          Length = 224856

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    aagaactttggacgtcgaag 217
              ||||||||||||||||||||
Sbjct: 105864 aagaactttggacgtcgaag 105845
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>emb|AL806514.8| Mouse DNA sequence from clone RP23-18D24 on chromosome 2, complete
              sequence
          Length = 206358

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    tgcaaatattttgccaacca 133
              ||||||||||||||||||||
Sbjct: 111984 tgcaaatattttgccaacca 112003


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,598,781
Number of Sequences: 3902068
Number of extensions: 4598781
Number of successful extensions: 114716
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114276
Number of HSP's gapped (non-prelim): 440
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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