ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95d11 |
|---|---|
| Clone Library Name | barley_pub |
>RK21_ARATH (P51412) 50S ribosomal protein L21, chloroplast precursor (CL21)| Length = 220 Score = 137 bits (344), Expect = 2e-32 Identities = 67/100 (67%), Positives = 77/100 (77%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 GRY+YTQRLKDANV+DQI+LNKVLLV T+ YIG PVVTNA VHA+VE QGL+D Sbjct: 116 GRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVF 175 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGISGYEEYPADPILQV 166 KY+R GHRQPNTR+RITGI+GYEEYPA P + V Sbjct: 176 KYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPASPNVAV 215
>RK21_SPIOL (P24613) 50S ribosomal protein L21, chloroplast precursor (CL21)| (CS-L7) Length = 256 Score = 124 bits (311), Expect = 1e-28 Identities = 60/97 (61%), Positives = 72/97 (74%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 GR+IYTQRLK A VND+I+LNKVLLV T+ YIG P+VTNAAVHA+VEEQ LDD Sbjct: 139 GRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVF 198 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGISGYEEYPADPI 175 Y+R GHRQP TR++ITGI+GYE+YPA + Sbjct: 199 KYKKKKNYRRNIGHRQPITRIKITGITGYEDYPASTL 235
>RM21_ARATH (Q8L9A0) 50S ribosomal protein L21, mitochondrial precursor| Length = 270 Score = 78.6 bits (192), Expect = 7e-15 Identities = 41/102 (40%), Positives = 61/102 (59%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G I+T++LK ++ND++ L KVLL+ + + IG P++ +A VHA+VEE LD+ Sbjct: 156 GDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIF 215 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGISGYEEYPADPILQVPA 160 Y+R GHRQ T+LRIT I G E+ P I+ P+ Sbjct: 216 KKKRRKNYRRTRGHRQELTKLRITDIQGIEK-PEPKIVHKPS 256
>RL21_STAES (Q8CS87) 50S ribosomal protein L21| Length = 102 Score = 49.7 bits (117), Expect = 4e-06 Identities = 32/87 (36%), Positives = 43/87 (49%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ IY ++L +AN D +KVL V D +G P V A+V A V +QG Sbjct: 17 GQEIYVEKL-NANEGDSFTFDKVLFVGG-DSVKVGAPTVEGASVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAEQ (Q5HNQ4) 50S ribosomal protein L21| Length = 102 Score = 49.7 bits (117), Expect = 4e-06 Identities = 32/87 (36%), Positives = 43/87 (49%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ IY ++L +AN D +KVL V D +G P V A+V A V +QG Sbjct: 17 GQEIYVEKL-NANEGDSFTFDKVLFVGG-DSVKVGAPTVEGASVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAS1 (Q49Y85) 50S ribosomal protein L21| Length = 102 Score = 48.9 bits (115), Expect = 6e-06 Identities = 31/87 (35%), Positives = 43/87 (49%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A+V A V++QG Sbjct: 17 GQEIFVEKL-DVNEGDSFTFDKVLFVGG-DAVKVGAPTVEGASVTATVQKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKDSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAHJ (Q4L6Z3) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/86 (36%), Positives = 40/86 (46%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDSFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGI 208 +RK GHRQP T+L I I Sbjct: 75 TYKRRKDSKRKKGHRQPYTKLTIDKI 100
>RL21_STAAW (Q7A0Q2) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/87 (35%), Positives = 41/87 (47%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAS (Q6G8S2) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/87 (35%), Positives = 41/87 (47%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAR (Q6GG57) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/87 (35%), Positives = 41/87 (47%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAN (Q7A583) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/87 (35%), Positives = 41/87 (47%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAM (Q99TK6) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/87 (35%), Positives = 41/87 (47%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAC (Q5HFB6) 50S ribosomal protein L21| Length = 102 Score = 47.8 bits (112), Expect = 1e-05 Identities = 31/87 (35%), Positives = 41/87 (47%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSKRKKGHRQPYTKLTIDKIN 101
>RL21_STAAU (Q93EP0) 50S ribosomal protein L21| Length = 102 Score = 47.0 bits (110), Expect = 2e-05 Identities = 31/87 (35%), Positives = 40/87 (45%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ I+ ++L D N D +KVL V D +G P V A V A V +QG Sbjct: 17 GQEIFVEKL-DVNEGDTFTFDKVLFVGG-DSVKVGAPTVEGATVTATVNKQGRGKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 RK GHRQP T+L I I+ Sbjct: 75 TYKRRKNSXRKKGHRQPYTKLTIDKIN 101
>RL21_RICPR (Q9ZCI9) 50S ribosomal protein L21| Length = 105 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Frame = -1 Query: 435 DANVNDQIILNKVLLVSTRDK-AYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQ 259 D + +I +++L++ K ++IG P+V A V A + Q D+ Y+ Sbjct: 26 DGELGSKIQFDQILMIGEYSKPSFIGTPIVKGAIVTAEITNQLKDNKIIAFKKKRRKNYR 85 Query: 258 RKAGHRQPNTRLRITGIS 205 RKAGHRQ T L+I I+ Sbjct: 86 RKAGHRQELTELKILDIT 103
>RL21_LAWIN (O87886) 50S ribosomal protein L21| Length = 102 Score = 42.0 bits (97), Expect = 8e-04 Identities = 27/86 (31%), Positives = 40/86 (46%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G I+ ++ DA V +I +K+ ++ IG P + NA V A V E G D Sbjct: 17 GSKIFVSKI-DAEVGTEIFFDKIFMIGG-SSPQIGTPYINNAKVIAKVLEHGRDKKILVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGI 208 ++ GHRQ T L++TGI Sbjct: 75 KKWRRNDSRKLQGHRQDYTALKVTGI 100
>RL21_MYCPN (P78026) 50S ribosomal protein L21| Length = 100 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/73 (32%), Positives = 38/73 (52%) Frame = -1 Query: 435 DANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQR 256 +A V +I L+KVL++ + IG P + A V +VE+ GL + + Sbjct: 26 EAPVGKEIQLDKVLMLDEK----IGAPYLEKARVVCVVEKHGLQRKVNVIKHISQKHHLK 81 Query: 255 KAGHRQPNTRLRI 217 K GHRQP T+L++ Sbjct: 82 KYGHRQPYTKLKV 94
>RL21_SYNY3 (P74266) 50S ribosomal protein L21| Length = 124 Score = 40.0 bits (92), Expect = 0.003 Identities = 29/87 (33%), Positives = 37/87 (42%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 GR+ L DA D +++KVLLV D IG P V A V + Sbjct: 18 GRFYEINHL-DAAPEDSYVVDKVLLVKDGDNVTIGQPYVAGATVEGEILSHRRGRKVIVY 76 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 K ++K GHRQ TRL + IS Sbjct: 77 KMQPKKKTRKKRGHRQELTRLLVKSIS 103
>RL21_MYCGE (P47474) 50S ribosomal protein L21| Length = 100 Score = 40.0 bits (92), Expect = 0.003 Identities = 23/80 (28%), Positives = 41/80 (51%) Frame = -1 Query: 456 IYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXX 277 I+ ++L V +I L+KVL++ + IG P + A V ++E+ GL Sbjct: 20 IFVEKLA-GKVGQEIQLDKVLMLDEK----IGKPYLEKAKVVCVIEKHGLKSKIKLIKHI 74 Query: 276 XXXKYQRKAGHRQPNTRLRI 217 + ++ GHRQP T+L++ Sbjct: 75 SQKHHLKRYGHRQPYTKLKV 94
>RL21_BACSU (P26908) 50S ribosomal protein L21 (BL20)| Length = 102 Score = 40.0 bits (92), Expect = 0.003 Identities = 27/87 (31%), Positives = 39/87 (44%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ +Y ++L A + + VL V D +G P V A V A VE+QG Sbjct: 17 GQTVYIEKLA-AEAGETVTFEDVLFVGG-DNVKVGNPTVEGATVTAKVEKQGRAKKITVF 74 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 +K GHRQP T++ I I+ Sbjct: 75 RYKPKKNVHKKQGHRQPYTKVTIEKIN 101
>RK21_CYACA (O19884) Chloroplast 50S ribosomal protein L21| Length = 108 Score = 39.7 bits (91), Expect = 0.004 Identities = 25/91 (27%), Positives = 41/91 (45%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+Y Y AN D+II KVLL+ + IG P V VHA + + D Sbjct: 19 GKY-YNINYVHANPGDKIIFYKVLLLKNTNSLLIGKPFVEKVEVHATILQHLKDKKITVF 77 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGISGYEE 193 ++K G++ T+++I I +++ Sbjct: 78 KMQAKKGTKKKKGYKTVLTKIKINCIHNHKK 108
>RL21_SYNP7 (Q9Z3H5) 50S ribosomal protein L21| Length = 127 Score = 39.7 bits (91), Expect = 0.004 Identities = 28/87 (32%), Positives = 39/87 (44%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 GR+ RL DA+++ + L+KVLLV IG P V A V V Sbjct: 18 GRFYDLDRL-DADLDQSLTLDKVLLVQDEGAPQIGQPYVAGATVQVTVLSHPRGRKVTVY 76 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 K ++K GHRQ TR+ + I+ Sbjct: 77 KMKPKKKTRKKQGHRQDLTRVLVESIT 103
>RL21_SHIFL (P0AG50) 50S ribosomal protein L21| Length = 103 Score = 39.3 bits (90), Expect = 0.005 Identities = 23/87 (26%), Positives = 43/87 (49%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ + ++L D + + +VL+++ ++ IG+P V + A V G + Sbjct: 17 GQTVRLEKL-DIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIV 75 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 Y+++ GHRQ T ++ITGIS Sbjct: 76 KFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_ECOLI (P0AG48) 50S ribosomal protein L21| Length = 103 Score = 39.3 bits (90), Expect = 0.005 Identities = 23/87 (26%), Positives = 43/87 (49%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ + ++L D + + +VL+++ ++ IG+P V + A V G + Sbjct: 17 GQTVRLEKL-DIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIV 75 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 Y+++ GHRQ T ++ITGIS Sbjct: 76 KFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_ECO57 (P0AG49) 50S ribosomal protein L21| Length = 103 Score = 39.3 bits (90), Expect = 0.005 Identities = 23/87 (26%), Positives = 43/87 (49%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ + ++L D + + +VL+++ ++ IG+P V + A V G + Sbjct: 17 GQTVRLEKL-DIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIV 75 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGIS 205 Y+++ GHRQ T ++ITGIS Sbjct: 76 KFRRRKHYRKQQGHRQWFTDVKITGIS 102
>RL21_THET8 (P60492) 50S ribosomal protein L21| Length = 101 Score = 38.9 bits (89), Expect = 0.007 Identities = 23/59 (38%), Positives = 28/59 (47%) Frame = -1 Query: 378 DKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 202 +K +G PVV A+V A V G +Y+RK GHRQP T L I I G Sbjct: 43 EKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKEIRG 101
>RL21_THEMA (Q9X1G9) 50S ribosomal protein L21| Length = 105 Score = 37.7 bits (86), Expect = 0.015 Identities = 23/86 (26%), Positives = 39/86 (45%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+ +YT++ KD + D+I+ ++V+ V + +G P V A V V E Sbjct: 18 GKILYTEKQKDYSPGDEIVFDRVVFVRKDGEVLVGKPYVEGAKVVGKVLEHAKARKVKTV 77 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGI 208 + + GHRQ T ++I I Sbjct: 78 KYRPRKNSKVEKGHRQWYTAIKIEKI 103
>RL21_CHLPN (Q9Z806) 50S ribosomal protein L21| Length = 106 Score = 37.4 bits (85), Expect = 0.019 Identities = 25/87 (28%), Positives = 36/87 (41%) Frame = -1 Query: 468 AGRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXX 289 +G I + L + + ++I VL V KA +G P + NA V A + Sbjct: 18 SGDVIDVELLGEVASDKEVIFQDVLFVFDGTKASLGSPTIANAQVKAEYLSHVKGEKVVA 77 Query: 288 XXXXXXXKYQRKAGHRQPNTRLRITGI 208 Y RK GHRQ R++I I Sbjct: 78 YKYKKRKNYHRKHGHRQKYLRVKIREI 104
>RL21_BORBU (O51719) 50S ribosomal protein L21| Length = 103 Score = 35.4 bits (80), Expect = 0.073 Identities = 18/61 (29%), Positives = 27/61 (44%) Frame = -1 Query: 420 DQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHR 241 D++ N VLL++ + IG P V N+ + +E D +RK GHR Sbjct: 31 DKLEFNSVLLINKDGEVKIGKPYVVNSLIRCTYKEDKKDKKVVSYRYRRRKSSERKVGHR 90 Query: 240 Q 238 Q Sbjct: 91 Q 91
>RL21_HAEIN (P44359) 50S ribosomal protein L21| Length = 103 Score = 34.7 bits (78), Expect = 0.12 Identities = 22/63 (34%), Positives = 30/63 (47%) Frame = -1 Query: 396 LLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRI 217 L+V + IG PVV A V A V QG + +++ GHRQ T ++I Sbjct: 39 LMVVNGEDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKI 98 Query: 216 TGI 208 TGI Sbjct: 99 TGI 101
>RL21_TREPA (O83727) 50S ribosomal protein L21| Length = 105 Score = 33.9 bits (76), Expect = 0.21 Identities = 23/88 (26%), Positives = 33/88 (37%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G I + + I + +VL++ IG P + V A+V E Sbjct: 17 GSSIVVDNISEVAPGGCIDVREVLMIGGEGLTRIGSPYLEGVGVRAVVGECFRSRKITVY 76 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGISG 202 Y R GHRQ TRL ++ I G Sbjct: 77 KYKSKKDYHRTIGHRQWYTRLTVSDILG 104
>RL21_BUCAI (P57467) 50S ribosomal protein L21| Length = 108 Score = 32.7 bits (73), Expect = 0.47 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = -1 Query: 414 IILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQP 235 I +K+L++ +D IG P V + A ++ G Y+++ GHRQ Sbjct: 33 IEFDKILMLFDKDSIKIGTPFVEGGTIKAHIQNHGRLKKIKIIKFNRRKHYKKQQGHRQY 92 Query: 234 NTRLRITGIS 205 T ++I I+ Sbjct: 93 FTDVKIIDIN 102
>RK21_PORPU (P51209) Chloroplast 50S ribosomal protein L21| Length = 104 Score = 32.3 bits (72), Expect = 0.62 Identities = 27/86 (31%), Positives = 33/86 (38%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 GRY Y IIL KVLL++ +G P + A + A V Sbjct: 18 GRY-YDLNHIPVEPGQSIILGKVLLLNKDGHVSLGHPCIEGAVIKATVMRHLRGKKITVF 76 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGI 208 K + K GHRQ TRL I I Sbjct: 77 KMKPKKKMRLKKGHRQELTRLMIDSI 102
>RK21_ODOSI (P49557) Chloroplast 50S ribosomal protein L21| Length = 105 Score = 32.0 bits (71), Expect = 0.80 Identities = 24/86 (27%), Positives = 38/86 (44%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G+Y R+ + +I LN+VLL++ + IG P + + V + E Sbjct: 18 GKYYDFNRIP-TELGKEITLNRVLLLNNEGEILIGKPYLESVTVKGKILEHLRGRKTLVY 76 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGI 208 K ++K GHRQ TR+ I I Sbjct: 77 KMRPKKKTRKKQGHRQELTRVLIEEI 102
>RK21_GUITH (O78429) Chloroplast 50S ribosomal protein L21| Length = 104 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/71 (30%), Positives = 30/71 (42%) Frame = -1 Query: 420 DQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHR 241 D+I L +VLL++ +G P + N V A V K ++K GHR Sbjct: 32 DKIALTRVLLINDNGNITVGKPCLDNVKVEATVLGHLRGQKVTVYKMQPKKKTRKKQGHR 91 Query: 240 QPNTRLRITGI 208 TRL I I Sbjct: 92 TNLTRLLIDNI 102
>RL21_STRGR (P95756) 50S ribosomal protein L21| Length = 106 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/86 (24%), Positives = 36/86 (41%) Frame = -1 Query: 465 GRYIYTQRLKDANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXX 286 G + ++ A V D + L+ +L+V D V+ V A + + Sbjct: 17 GDIVEVDKISTAKVGDTVELSTLLVVDG-DAVTSDPWVLDGIKVTAEIVDHHKGAKIDIL 75 Query: 285 XXXXXXKYQRKAGHRQPNTRLRITGI 208 Y+R+ GHRQ T +++TGI Sbjct: 76 RYKNKTGYRRRQGHRQQYTAIKVTGI 101
>RL21_DEIRA (Q9RY64) 50S ribosomal protein L21| Length = 100 Score = 29.3 bits (64), Expect = 5.2 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -1 Query: 336 VHAIVEEQGLDDXXXXXXXXXXXKYQRKAGHRQPNTRLRITGISG 202 V A V E G +Y+R+ GHRQ T ++I GI G Sbjct: 56 VQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGIQG 100
>RL21_RHOPA (Q6NDF0) 50S ribosomal protein L21 (RRP-L21)| Length = 125 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/76 (31%), Positives = 32/76 (42%) Frame = -1 Query: 435 DANVNDQIILNKVLLVSTRDKAYIGMPVVTNAAVHAIVEEQGLDDXXXXXXXXXXXKYQR 256 D +V I L +VL++ D +G P V A V A V + +R Sbjct: 25 DGDVGSIIQLGEVLVLGG-DTPVLGAPTVAGATVAAEVLDHKRGPKVIAFKKRRRKHSKR 83 Query: 255 KAGHRQPNTRLRITGI 208 K G+R T LRIT I Sbjct: 84 KRGYRDEITVLRITEI 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,299,703 Number of Sequences: 219361 Number of extensions: 1057544 Number of successful extensions: 2139 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2089 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2124 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
