ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95d08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ272309.1|HVU272309 Hordeum vulgare mRNA for sucrose transporter 1 (sut1 gene) Length = 2044 Score = 722 bits (364), Expect = 0.0 Identities = 367/368 (99%) Strand = Plus / Minus Query: 3 gctgctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctaca 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2022 gctgctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctaca 1963 Query: 63 cgcaagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1962 cgcaagtcacaacccaaaggacgacaccccagccggtgatggatgcccgcatccccctgt 1903 Query: 123 ccattttccgctacatacagtgactctgaccggcacacacatacagacacaacacatacg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1902 ccattttccgctacatacagtgactctgaccggcacacacatacagacacaacacatacg 1843 Query: 183 gttccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacga 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1842 gttccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacga 1783 Query: 243 cgcctatgcgaaaatttggtaatagacgcgagctgcgaccgcccggccggcgcgatcggc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1782 cgcctatgcgaaaatttggtaatagacgcgagctgcgaccgcccggccggcgcgatcggc 1723 Query: 303 ctccgccatgctcaggtcagtcagtgaccgccgccgctgacggcccggaactggcgcctg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1722 ctccgccatgctcaggtcagtcagtgaccgccgccgctgacggcccggaactggcgcctg 1663 Query: 363 gagatctt 370 |||||||| Sbjct: 1662 gagatctt 1655
>emb|AM055812.1| Hordeum vulgare subsp. vulgare mRNA for sucrose transporter 1 (sut1 gene) Length = 2044 Score = 722 bits (364), Expect = 0.0 Identities = 367/368 (99%) Strand = Plus / Minus Query: 3 gctgctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctaca 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2022 gctgctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctaca 1963 Query: 63 cgcaagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgt 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1962 cgcaagtcacaacccaaaggacgacaccccagccggtgatggatgcccgcatccccctgt 1903 Query: 123 ccattttccgctacatacagtgactctgaccggcacacacatacagacacaacacatacg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1902 ccattttccgctacatacagtgactctgaccggcacacacatacagacacaacacatacg 1843 Query: 183 gttccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacga 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1842 gttccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacga 1783 Query: 243 cgcctatgcgaaaatttggtaatagacgcgagctgcgaccgcccggccggcgcgatcggc 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1782 cgcctatgcgaaaatttggtaatagacgcgagctgcgaccgcccggccggcgcgatcggc 1723 Query: 303 ctccgccatgctcaggtcagtcagtgaccgccgccgctgacggcccggaactggcgcctg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1722 ctccgccatgctcaggtcagtcagtgaccgccgccgctgacggcccggaactggcgcctg 1663 Query: 363 gagatctt 370 |||||||| Sbjct: 1662 gagatctt 1655
>gb|AF408843.1| Triticum aestivum sucrose transporter SUT1B mRNA, complete cds Length = 2021 Score = 281 bits (142), Expect = 8e-73 Identities = 232/259 (89%), Gaps = 11/259 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| |||||||||||||||||||||||| | ||||| |||||||||||| | Sbjct: 2003 gctgaaagttcatcatccattcttttcccctcacttgatcacctt-ggtttgctacacac 1945 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 1944 aagtcacaacccaaag-acgacaccccagccggtgatggatgcccgcattcctctgtcca 1886 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatacggtt 185 ||||| |||||| || ||||| ||| |||||||||||||||||||||||||| Sbjct: 1885 ttttctgctacacgcactgactta------cacgcacatacagacacaacacatacggtt 1832 Query: 186 ccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacgc 245 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1831 cctcacaattcttattctgctctacggagtccttaggcgagagccacctagtt---acgc 1775 Query: 246 ctatgcgaaaatttggtaa 264 ||||||||||||||||||| Sbjct: 1774 ctatgcgaaaatttggtaa 1756 Score = 97.6 bits (49), Expect = 2e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1693 gtcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 1645
>gb|BT009324.1| Triticum aestivum clone wlm24.pk0015.g11:fis, full insert mRNA sequence Length = 2160 Score = 274 bits (138), Expect = 2e-70 Identities = 276/317 (87%), Gaps = 15/317 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| |||||||||||||||||||||||| | ||||| |||||||||||| | Sbjct: 2094 gctgaaagttcatcatccattcttttcccctcacttgatcacctt-ggtttgctacacac 2036 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2035 aagtcacaacccaaag-acgacaccccagccggcgatggatgcccgcattcctctgtcca 1977 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatac-ggt 184 |||||||||||| || ||||| ||| |||||||||||||||||||||| ||| Sbjct: 1976 ttttccgctacacgca------ctgacttacacgcacatacagacacaacacatacaggt 1923 Query: 185 tccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacg 244 ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1922 tcctcacaattcttattctgctctacggagtccttaggcgagagccccctagtt---acg 1866 Query: 245 cctatgcgaaaatttggtaatagacg---cgagctgcgaccgcccggccggcgcgatcgg 301 |||||||||||||||||||| | || | |||| |||| | ||||||||||||||| Sbjct: 1865 cctatgcgaaaatttggtaaatgccgagctgggctgggaccttcgggccggcgcgatcgg 1806 Query: 302 cctccgccatgctcagg 318 ||| ||||||||||||| Sbjct: 1805 ccttcgccatgctcagg 1789 Score = 97.6 bits (49), Expect = 2e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1769 gtcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 1721
>gb|BT009200.1| Triticum aestivum clone wle1n.pk0007.h8:fis, full insert mRNA sequence Length = 1072 Score = 274 bits (138), Expect = 2e-70 Identities = 276/317 (87%), Gaps = 15/317 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| |||||||||||||||||||||||| | ||||| |||||||||||| | Sbjct: 1026 gctgaaagttcatcatccattcttttcccctcacttgatcacctt-ggtttgctacacac 968 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 967 aagtcacaacccaaag-acgacaccccagccggcgatggatgcccgcattcctctgtcca 909 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatac-ggt 184 |||||||||||| || ||||| ||| |||||||||||||||||||||| ||| Sbjct: 908 ttttccgctacacgca------ctgacttacacgcacatacagacacaacacatacaggt 855 Query: 185 tccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacg 244 ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 854 tcctcacaattcttattctgctctacggagtccttaggcgagagccccctagtt---acg 798 Query: 245 cctatgcgaaaatttggtaatagacg---cgagctgcgaccgcccggccggcgcgatcgg 301 |||||||||||||||||||| | || | |||| |||| | ||||||||||||||| Sbjct: 797 cctatgcgaaaatttggtaaatgccgagctgggctgggaccttcgggccggcgcgatcgg 738 Query: 302 cctccgccatgctcagg 318 ||| ||||||||||||| Sbjct: 737 ccttcgccatgctcagg 721 Score = 83.8 bits (42), Expect = 4e-13 Identities = 49/50 (98%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgccgctgacggc-ccggaactggcgcctggagatctt 370 ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 701 gtcagtgaccgccgccgctgacggcaccggaactggcgcctggagatctt 652
>gb|AF408842.1| Triticum aestivum sucrose transporter SUT1A mRNA, complete cds Length = 2134 Score = 274 bits (138), Expect = 2e-70 Identities = 276/317 (87%), Gaps = 15/317 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| |||||||||||||||||||||||| | ||||| |||||||||||| | Sbjct: 2116 gctgaaagttcatcatccattcttttcccctcacttgatcacctt-ggtttgctacacac 2058 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2057 aagtcacaacccaaag-acgacaccccagccggcgatggatgcccgcattcctctgtcca 1999 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatac-ggt 184 |||||||||||| || ||||| ||| |||||||||||||||||||||| ||| Sbjct: 1998 ttttccgctacacgca------ctgacttacacgcacatacagacacaacacatacaggt 1945 Query: 185 tccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacg 244 ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1944 tcctcacaattcttattctgctctacggagtccttaggcgagagccccctagtt---acg 1888 Query: 245 cctatgcgaaaatttggtaatagacg---cgagctgcgaccgcccggccggcgcgatcgg 301 |||||||||||||||||||| | || | |||| |||| | ||||||||||||||| Sbjct: 1887 cctatgcgaaaatttggtaaatgccgagctgggctgggaccttcgggccggcgcgatcgg 1828 Query: 302 cctccgccatgctcagg 318 ||| ||||||||||||| Sbjct: 1827 ccttcgccatgctcagg 1811 Score = 97.6 bits (49), Expect = 2e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1791 gtcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 1743
>gb|BT009233.1| Triticum aestivum clone wle1n.pk0103.c11:fis, full insert mRNA sequence Length = 2083 Score = 260 bits (131), Expect = 3e-66 Identities = 231/260 (88%), Gaps = 12/260 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| ||||||||| |||||||||||||| | ||||| |||||||||||| | Sbjct: 2074 gctgaaagttcatcatccattcatttcccctcacttgatcacctt-ggtttgctacacac 2016 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||| ||| || ||||||| Sbjct: 2015 aagtcacaacccaaag-acgacaccccagccggtgatggatgcccacattcctctgtcca 1957 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatac-ggt 184 |||||||||||| || ||||| ||| |||||||||||||||||||||| ||| Sbjct: 1956 ttttccgctacacgcactgactta------cacgcacatacagacacaacacatacaggt 1903 Query: 185 tccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacg 244 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1902 tcctcacaattcttattctgctctacggagtccttaggcgagagccacctagtt---acg 1846 Query: 245 cctatgcgaaaatttggtaa 264 |||||||||||||||||||| Sbjct: 1845 cctatgcgaaaatttggtaa 1826 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1787 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 1740
>gb|AF408844.1| Triticum aestivum sucrose transporter SUT1D mRNA, complete cds Length = 2106 Score = 260 bits (131), Expect = 3e-66 Identities = 231/260 (88%), Gaps = 12/260 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| ||||||||| |||||||||||||| | ||||| |||||||||||| | Sbjct: 2088 gctgaaagttcatcatccattcatttcccctcacttgatcacctt-ggtttgctacacac 2030 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||| ||| || ||||||| Sbjct: 2029 aagtcacaacccaaag-acgacaccccagccggtgatggatgcccacattcctctgtcca 1971 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatac-ggt 184 |||||||||||| || ||||| ||| |||||||||||||||||||||| ||| Sbjct: 1970 ttttccgctacacgcactgactta------cacgcacatacagacacaacacatacaggt 1917 Query: 185 tccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacg 244 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1916 tcctcacaattcttattctgctctacggagtccttaggcgagagccacctagtt---acg 1860 Query: 245 cctatgcgaaaatttggtaa 264 |||||||||||||||||||| Sbjct: 1859 cctatgcgaaaatttggtaa 1840 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1801 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 1754
>gb|AF408845.1| Triticum aestivum sucrose transporter SUT1D gene, complete cds Length = 6582 Score = 260 bits (131), Expect = 3e-66 Identities = 231/260 (88%), Gaps = 12/260 (4%) Strand = Plus / Minus Query: 6 gctgaaatttcaccatccattcttttcccctcacttggtaacctttggtttgctacacgc 65 ||||||| |||| ||||||||| |||||||||||||| | ||||| |||||||||||| | Sbjct: 6440 gctgaaagttcatcatccattcatttcccctcacttgatcacctt-ggtttgctacacac 6382 Query: 66 aagtcacaacccaaaggacgacaccccagccggggatggatgcccgcatccccctgtcca 125 |||||||||||||||| |||||||||||||||| ||||||||||| ||| || ||||||| Sbjct: 6381 aagtcacaacccaaag-acgacaccccagccggtgatggatgcccacattcctctgtcca 6323 Query: 126 ttttccgctacatacagtgactctgaccggcacacacatacagacacaacacatac-ggt 184 |||||||||||| || ||||| ||| |||||||||||||||||||||| ||| Sbjct: 6322 ttttccgctacacgcactgactta------cacgcacatacagacacaacacatacaggt 6269 Query: 185 tccccacaattcttattctgctctacggagtccttaggcgagagccacctagttacgacg 244 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 6268 tcctcacaattcttattctgctctacggagtccttaggcgagagccacctagtt---acg 6212 Query: 245 cctatgcgaaaatttggtaa 264 |||||||||||||||||||| Sbjct: 6211 cctatgcgaaaatttggtaa 6192 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6153 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 6106
>gb|BT016523.1| Zea mays clone Contig356 mRNA sequence Length = 1094 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 807 tcagtggccgcccgcgctgacggcccggaactggcgcttggagatctt 760
>gb|AY106212.1| Zea mays PCO103031 mRNA sequence Length = 2088 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1761 tcagtggccgcccgcgctgacggcccggaactggcgcttggagatctt 1714
>gb|AY780256.1| Saccharum hybrid cultivar sucrose transporter (SUT1) mRNA, complete cds Length = 1554 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||| ||||| |||||||||||| |||||||||| |||||||||| Sbjct: 1554 tcagtggccgcccgcgctgacggccctgaactggcgcttggagatctt 1507
>dbj|AB008464.1| Zea mays mRNA for Sucrose Transporter, complete cds Length = 1834 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||| ||||| |||||||||| |||||||||||| |||||||||| Sbjct: 1733 tcagtggccgcccgcgctgacggcgcggaactggcgcttggagatctt 1686
>ref|XM_470311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1253 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 897 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 846
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 3779727 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 3779778
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 1650 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 1599
>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11, complete sequence Length = 132151 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 58351 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 58402
>gb|AF280050.1| Oryza sativa (indica cultivar-group) sucrose transporter (SUT1) gene, complete cds Length = 7717 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 7358 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 7307
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 3779838 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 3779889
>dbj|AK109355.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F11, full insert sequence Length = 1222 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 869 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 818
>dbj|AK100027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J01, full insert sequence Length = 2062 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | ||||||||||||| |||||||||| Sbjct: 1818 gtcagtgaccgccgcccatgctgaccgaccggaactggcgcttggagatctt 1767
>gb|AY107070.1| Zea mays PCO070529 mRNA sequence Length = 445 Score = 50.1 bits (25), Expect = 0.005 Identities = 42/48 (87%) Strand = Plus / Plus Query: 323 tcagtgaccgccgccgctgacggcccggaactggcgcctggagatctt 370 |||||| ||||| | |||||||| |||||||||||| |||||||||| Sbjct: 380 tcagtggccgcccgcnctgacggcgcggaactggcgcttggagatctt 427
>gb|AC108944.4| Mus musculus BAC clone RP23-114I22 from chromosome 9, complete sequence Length = 198019 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaacacatac 181 ||||||||||||| ||||||||||||| Sbjct: 148521 gcacacacatacacacacaacacatac 148495
>gb|AC111087.9| Mus musculus chromosome 9, clone RP23-152O16, complete sequence Length = 231508 Score = 46.1 bits (23), Expect = 0.080 Identities = 26/27 (96%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacacatac 181 ||||||||||||| ||||||||||||| Sbjct: 176651 gcacacacatacacacacaacacatac 176677
>dbj|AP001317.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684B20, complete sequence Length = 166459 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacaca 178 ||||||||||||||||||||||| Sbjct: 67683 cacacacatacagacacaacaca 67661
>gb|AC126020.4| Mus musculus BAC clone RP24-364O7 from 8, complete sequence Length = 179287 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 159 acacatacagacacaacacatac 181 ||||||||||||||||||||||| Sbjct: 110356 acacatacagacacaacacatac 110334 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacatac 181 ||||||| |||||||||||||||||| Sbjct: 110390 cacacacctacagacacaacacatac 110365
>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete sequence Length = 221319 Score = 46.1 bits (23), Expect = 0.080 Identities = 23/23 (100%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacaca 178 ||||||||||||||||||||||| Sbjct: 19727 cacacacatacagacacaacaca 19705
>gb|AC102150.10| Mus musculus chromosome 7, clone RP23-310N5, complete sequence Length = 182393 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 173270 cacacacatacacacacaacacatac 173245
>gb|AC157790.10| Mus musculus chromosome 7, clone RP24-151M10, complete sequence Length = 167728 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 57248 cacacacatacacacacaacacatac 57273
>gb|AC121900.2| Mus musculus BAC clone RP24-167E15 from 7, complete sequence Length = 170266 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 76481 cacacacatacacacacaacacatac 76456
>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland Research Institute) complete sequence Length = 170859 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 7875 cacacacatacacacacaacacatac 7900
>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland Research Institute) complete sequence Length = 211584 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 64575 cacacacatacacacacaacacatac 64550
>emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in linkage group 13, complete sequence Length = 184555 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacac 177 |||||||||||||||||||||| Sbjct: 45857 cacacacatacagacacaacac 45878
>emb|AL591426.17| Mouse DNA sequence from clone RP23-345E8 on chromosome 11 Contains a novel gene, the Arht1 gene for ras homolog gene family member T1, the 5' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 153420 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 99031 cacacacatacacacacaacacatac 99006
>gb|AC093224.3| Homo sapiens chromosome 5 clone CTD-2220H13, complete sequence Length = 58690 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 acacacatacagacacaacaca 178 |||||||||||||||||||||| Sbjct: 97 acacacatacagacacaacaca 76
>gb|AC159307.2| Mus musculus BAC clone RP23-169J21 from chromosome 12, complete sequence Length = 190562 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 83033 cacacacatacacacacaacacatac 83058
>gb|AC026791.4|AC026791 Homo sapiens chromosome 5 clone CTD-2265D9, complete sequence Length = 154318 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 157 acacacatacagacacaacaca 178 |||||||||||||||||||||| Sbjct: 13796 acacacatacagacacaacaca 13817
>emb|AL805965.19| Mouse DNA sequence from clone RP23-193K10 on chromosome 2, complete sequence Length = 205790 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 acacacatacagacacaacaca 178 |||||||||||||||||||||| Sbjct: 188985 acacacatacagacacaacaca 188964 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 acacacatacagacacaacaca 178 |||||||||||||||||||||| Sbjct: 188757 acacacatacagacacaacaca 188736
>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete sequence Length = 208470 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacatac 181 |||||||||||| ||||||||||||| Sbjct: 40484 cacacacatacatacacaacacatac 40459
>dbj|D87819.1| Oryza sativa (japonica cultivar-group) mRNA for sucrose transporter, complete cds Length = 2036 Score = 44.1 bits (22), Expect = 0.32 Identities = 45/52 (86%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 322 gtcagtgaccgccgcc---gctgacggcccggaactggcgcctggagatctt 370 |||||||||||||||| |||||| | || |||||||||| |||||||||| Sbjct: 1681 gtcagtgaccgccgcccatgctgaccgaccagaactggcgcttggagatctt 1630
>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence Length = 199737 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 acacacatacagacacaacacatac 181 ||||||||| ||||||||||||||| Sbjct: 27696 acacacatatagacacaacacatac 27720
>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence Length = 239046 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 183225 acacacatacatacacaacacatac 183201
>gb|AC159891.2| Mus musculus BAC clone RP23-394E10 from chromosome 9, complete sequence Length = 178766 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ggcacacacatacagacacaacaca 178 |||||||||||||||||| |||||| Sbjct: 48727 ggcacacacatacagacaaaacaca 48703
>gb|AC121299.16| Mus musculus chromosome 17, clone RP23-402P8, complete sequence Length = 217287 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacata 180 |||||||| |||||||||||||||| Sbjct: 128577 cacacacacacagacacaacacata 128601
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 acacacatacagacacaacac 177 ||||||||||||||||||||| Sbjct: 31008 acacacatacagacacaacac 30988
>gb|AC158918.7| Mus musculus chromosome 15, clone RP23-106N12, complete sequence Length = 209747 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 141065 acacacatacaaacacaacacatac 141089
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cacaattcttattctgctcta 209 ||||||||||||||||||||| Sbjct: 64594 cacaattcttattctgctcta 64614
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cacaattcttattctgctcta 209 ||||||||||||||||||||| Sbjct: 7255 cacaattcttattctgctcta 7275
>gb|AC134560.5| Mus musculus BAC clone RP24-100B13 from chromosome 16, complete sequence Length = 175179 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 acatacagacacaacacatac 181 ||||||||||||||||||||| Sbjct: 167060 acatacagacacaacacatac 167080
>gb|AC142405.4| Mus musculus BAC clone RP24-559P3 from chromosome 5, complete sequence Length = 144109 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cacacacatacagacacaaca 176 ||||||||||||||||||||| Sbjct: 93217 cacacacatacagacacaaca 93197
>gb|AC151834.7| Mus musculus BAC clone RP23-382M10 from chromosome 8, complete sequence Length = 208404 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 177869 acacacatacacacacaacacatac 177845
>gb|AC123850.3| Mus musculus BAC clone RP23-319K22 from chromosome 5, complete sequence Length = 200934 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 tgaccggcacacacatacagacaca 173 |||| |||||||||||||||||||| Sbjct: 76266 tgactggcacacacatacagacaca 76290
>gb|AC122321.4| Mus musculus BAC clone RP23-319I22 from chromosome 12, complete sequence Length = 167106 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 9748 acacacatacatacacaacacatac 9724
>gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome 16, complete sequence Length = 172980 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 acatacagacacaacacatac 181 ||||||||||||||||||||| Sbjct: 13738 acatacagacacaacacatac 13758
>gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome 5, complete sequence Length = 238781 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 tgaccggcacacacatacagacaca 173 |||| |||||||||||||||||||| Sbjct: 159101 tgactggcacacacatacagacaca 159125
>gb|AC122477.5| Mus musculus BAC clone RP24-336L24 from chromosome 14, complete sequence Length = 158605 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacata 180 ||||||||||||||||| ||||||| Sbjct: 22759 cacacacatacagacaccacacata 22735
>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence Length = 238516 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 ggcacacacatacagacacaacaca 178 |||||||||||||| |||||||||| Sbjct: 11735 ggcacacacatacacacacaacaca 11711
>gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, complete sequence Length = 215769 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 cacacatacagacacaacaca 178 ||||||||||||||||||||| Sbjct: 112091 cacacatacagacacaacaca 112111 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 209176 cacacacatacacacacaacacat 209199
>gb|AC151835.4| Mus musculus BAC clone RP23-333J1 from chromosome 14, complete sequence Length = 215551 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacata 180 ||||||||||||||||| ||||||| Sbjct: 92837 cacacacatacagacaccacacata 92861
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 108201 acacacatacacacacaacacatac 108177
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cacaattcttattctgctcta 209 ||||||||||||||||||||| Sbjct: 91113 cacaattcttattctgctcta 91133
>gb|AC107751.11| Mus musculus chromosome 15, clone RP23-244L21, complete sequence Length = 188768 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 12314 acacacatacaaacacaacacatac 12290
>dbj|AK036863.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930019P08 product:unclassifiable, full insert sequence Length = 2035 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 tgaccggcacacacatacagacaca 173 |||| |||||||||||||||||||| Sbjct: 1455 tgactggcacacacatacagacaca 1479
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cacaattcttattctgctcta 209 ||||||||||||||||||||| Sbjct: 10074354 cacaattcttattctgctcta 10074374
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cacaattcttattctgctcta 209 ||||||||||||||||||||| Sbjct: 22652056 cacaattcttattctgctcta 22652076
>gb|AC144611.2| Homo sapiens fosmid clone XXFOS-89066G9 from 2, complete sequence Length = 12965 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacata 180 |||||||||||||||||| |||||| Sbjct: 25 cacacacatacagacacaccacata 49
>emb|AL954387.17| Zebrafish DNA sequence from clone CH211-288B20 in linkage group 18, complete sequence Length = 125744 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cacacacatacagacacaaca 176 ||||||||||||||||||||| Sbjct: 31251 cacacacatacagacacaaca 31231
>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete sequence Length = 195733 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cacacacatacagacacaaca 176 ||||||||||||||||||||| Sbjct: 68414 cacacacatacagacacaaca 68394
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 cgccgccgctgacggcccgga 351 ||||||||||||||||||||| Sbjct: 252085 cgccgccgctgacggcccgga 252105
>gb|AC118926.13| Mus musculus chromosome 5, clone RP23-323D23, complete sequence Length = 232698 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cacacacatacagacacaaca 176 ||||||||||||||||||||| Sbjct: 9067 cacacacatacagacacaaca 9047
>gb|AC173707.2| Mus musculus BAC clone RP23-296A12 from chromosome 16, complete sequence Length = 171458 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ggcacacacatacagacacaacaca 178 |||||||||||||| |||||||||| Sbjct: 31702 ggcacacacatacacacacaacaca 31726
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 cacaattcttattctgctcta 209 ||||||||||||||||||||| Sbjct: 10080393 cacaattcttattctgctcta 10080413
>gb|AC122424.4| Mus musculus BAC clone RP24-173E19 from 8, complete sequence Length = 175181 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 122356 acacacatacacacacaacacatac 122380
>gb|AC140250.3| Mus musculus BAC clone RP24-288J3 from 1, complete sequence Length = 163490 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacatac 181 ||||||||||| ||||||||||||| Sbjct: 49296 acacacatacatacacaacacatac 49272
>gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complete sequence Length = 177652 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacata 180 ||||||||||||||||| ||||||| Sbjct: 122568 cacacacatacagacaccacacata 122544
>emb|AL626805.14| Mouse DNA sequence from clone RP23-118K16 on chromosome 4, complete sequence Length = 134717 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ggcacacacatacagacacaacaca 178 |||||||||||||| |||||||||| Sbjct: 58898 ggcacacacatacacacacaacaca 58922
>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence Length = 224370 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 acacacatacagacacaacacatac 181 ||||||||| ||||||||||||||| Sbjct: 95788 acacacatatagacacaacacatac 95812
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 acacacatacagacacaacac 177 ||||||||||||||||||||| Sbjct: 211368 acacacatacagacacaacac 211348
>gb|AC161269.4| Mus musculus BAC clone RP23-120K16 from chromosome 15, complete sequence Length = 206234 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 173153 ggcacacacatacagacaca 173134
>gb|AY779621.1| Bubalus bubalis clone BBMS172 microsatellite sequence Length = 471 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 392 ggcacacacatacagacaca 411
>gb|AY779591.1| Bubalus bubalis clone BBMS142 microsatellite sequence Length = 465 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 412 ggcacacacatacagacaca 431
>gb|AF121782.1| Homo sapiens chromosome 21q22.3 PAC 206A10, complete sequence Length = 142742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 128203 ggcacacacatacagacaca 128184
>gb|AF064857.1| Homo sapiens BAC derived from chromosome 21q22.3, complete sequence, containing PEP19 (PCP4) gene Length = 199665 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 65755 ggcacacacatacagacaca 65736
>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence Length = 194427 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acacatacagacacaacaca 178 |||||||||||||||||||| Sbjct: 30181 acacatacagacacaacaca 30162 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acacatacagacacaacaca 178 |||||||||||||||||||| Sbjct: 30146 acacatacagacacaacaca 30127
>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence Length = 210969 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 ctctgaccggcacacacatacagacaca 173 |||||||||||||||||| ||| ||||| Sbjct: 200446 ctctgaccggcacacacacacacacaca 200473
>gb|AC109807.9| Mus musculus chromosome 1, clone RP23-433B11, complete sequence Length = 227679 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 60018 ggcacacacatacagacaca 59999
>gb|AC148033.3| Homo sapiens chromosome UL clone XXFOS-801290B12, complete sequence Length = 42625 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaacaca 178 ||||||||||||| |||||||||| Sbjct: 17525 gcacacacatacacacacaacaca 17502
>gb|AC153608.10| Mus musculus 6 BAC RP23-79A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188294 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cacacatacagacacaacacatac 181 |||||||||| ||||||||||||| Sbjct: 179212 cacacatacatacacaacacatac 179235
>gb|AC166903.2| Mus musculus BAC clone RP24-163K10 from chromosome 16, complete sequence Length = 184060 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacata 180 ||||||||||||||| |||||||| Sbjct: 132490 acacacatacagacaaaacacata 132467
>gb|AC121860.4| Mus musculus BAC clone RP24-105K16 from chromosome 15, complete sequence Length = 148328 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 61862 ggcacacacatacagacaca 61843
>gb|AC101758.6| Mus musculus chromosome 1, clone RP24-75F14, complete sequence Length = 268826 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 141469 ggcacacacatacagacaca 141450
>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 97952 ggcacacacatacagacaca 97933
>gb|AC124709.3| Mus musculus BAC clone RP24-83P8 from chromosome 14, complete sequence Length = 195961 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 ctctgaccggcacacacatacagacaca 173 |||||||||||||||||| ||| ||||| Sbjct: 192665 ctctgaccggcacacacacacacacaca 192638
>gb|AC124458.5| Mus musculus BAC clone RP24-136E11 from chromosome 12, complete sequence Length = 168181 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 cacacatacagacacaacacatac 181 |||||||||||||||| ||||||| Sbjct: 141065 cacacatacagacacatcacatac 141042
>gb|AC132089.3| Mus musculus BAC clone RP24-426D18 from chromosome 1, complete sequence Length = 171608 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 cacacatacagacacaacacatac 181 |||||||||||||||| ||||||| Sbjct: 13597 cacacatacagacacatcacatac 13574
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence Length = 205352 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 158 cacacatacagacacaacacatac 181 ||||||||||||||| |||||||| Sbjct: 58443 cacacatacagacaccacacatac 58420
>gb|AC126243.3| Mus musculus BAC clone RP24-260I19 from chromosome 14, complete sequence Length = 180553 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 146 ctctgaccggcacacacatacagacaca 173 |||||||||||||||||| ||| ||||| Sbjct: 92305 ctctgaccggcacacacacacacacaca 92278
>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence Length = 160137 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 123713 ggcacacacatacagacaca 123732
>gb|AC083948.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-67P7, complete sequence Length = 214125 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 185725 ggcacacacatacagacaca 185706
>gb|AC112147.5| Mus musculus BAC clone RP23-175E16 from 9, complete sequence Length = 202928 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gcccgcatccccctgtccattttc 130 |||||||||||||||||| ||||| Sbjct: 82383 gcccgcatccccctgtcccttttc 82360
>gb|AC084162.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-11P12, complete sequence Length = 159180 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 1535 ggcacacacatacagacaca 1516
>gb|AC112151.3| Mus musculus BAC clone RP24-86M8 from 2, complete sequence Length = 216515 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 17047 ggcacacacatacagacaca 17066
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 194661 ggcacacacatacagacaca 194642
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 13450 ggcacacacatacagacaca 13431
>emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chromosome 1 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 135389 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 13483 ggcacacacatacagacaca 13502
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gcctccgccatgctcaggtc 320 |||||||||||||||||||| Sbjct: 44407 gcctccgccatgctcaggtc 44388
>emb|AL365192.22| Human DNA sequence from clone RP3-421H19 on chromosome 6 Contains the 5' part of a novel protein similar to ribosomal protein L14 (L14p/L23e), a novel gene, the CAPN11 gene for calpain 11 and one CpG island, complete sequence Length = 89351 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cacacacatacagacacaac 175 |||||||||||||||||||| Sbjct: 62542 cacacacatacagacacaac 62561 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cacacacatacagacacaac 175 |||||||||||||||||||| Sbjct: 62327 cacacacatacagacacaac 62346
>emb|AL355591.13| Human DNA sequence from clone RP11-300B7 on chromosome 10 Contains a CpG island, complete sequence Length = 129839 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaacaca 178 ||||||||| |||||||||||||| Sbjct: 121753 gcacacacacacagacacaacaca 121730
>gb|AC120768.5| Rattus norvegicus 7 BAC CH230-152B10 (Children's Hospital Oakland Research Institute) complete sequence Length = 221436 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 217556 cacacacatacatacacaacacat 217533
>emb|BX883043.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 2/11 Length = 347664 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacaca 178 ||||||||||||| |||||||||| Sbjct: 143848 gcacacacatacacacacaacaca 143871
>gb|AC078783.19| Homo sapiens 3 BAC RP11-320C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33768 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaa 174 |||||||||||||||||||| Sbjct: 22526 gcacacacatacagacacaa 22545
>emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chromosome 2, complete sequence Length = 206452 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 160616 cacacacatacacacacaacacat 160639
>gb|AC120734.5| Rattus norvegicus BAC CH230-220D1 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 232990 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaacaca 178 ||||||||||||| |||||||||| Sbjct: 23171 gcacacacatacacacacaacaca 23148
>gb|AC096541.2| Homo sapiens chromosome 1 clone RP11-330M19, complete sequence Length = 200368 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 190635 ggcacacacatacagacaca 190616
>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence Length = 173391 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacaca 178 |||||||||||||||||| ||||| Sbjct: 5868 gcacacacatacagacaccacaca 5891
>gb|AC012690.17| Homo sapiens chromosome 10 clone RP11-127B19, complete sequence Length = 161276 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacaca 178 |||||||||||||||||| ||||| Sbjct: 95242 gcacacacatacagacaccacaca 95265
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 4.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 312 gctcaggtcagtcagt-gaccgccgccg 338 |||||||||||||||| ||||||||||| Sbjct: 3095344 gctcaggtcagtcagtggaccgccgccg 3095317
>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence Length = 187350 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaa 174 |||||||||||||||||||| Sbjct: 173986 gcacacacatacagacacaa 173967
>gb|AC021979.6| Homo sapiens chromosome 15, clone RP11-30G8, complete sequence Length = 190692 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaa 174 |||||||||||||||||||| Sbjct: 8421 gcacacacatacagacacaa 8402
>gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, complete sequence Length = 210074 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaa 174 |||||||||||||||||||| Sbjct: 39746 gcacacacatacagacacaa 39727
>emb|AL773587.11| Mouse DNA sequence from clone RP23-38J2 on chromosome X, complete sequence Length = 175713 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 cacacatacagacacaacac 177 |||||||||||||||||||| Sbjct: 99974 cacacatacagacacaacac 99955
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ggatggatgcccgcatcccc 118 |||||||||||||||||||| Sbjct: 431222 ggatggatgcccgcatcccc 431241
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 cgcccggccggcgcgatcggcctc 305 |||||||| ||||||||||||||| Sbjct: 4307949 cgcccggctggcgcgatcggcctc 4307926
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence Length = 203908 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 26139 cacacacatacacacacaacacat 26162
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 35626 ggcacacacatacagacaca 35607
>gb|AC161493.6| Mus musculus chromosome 1, clone RP24-77I21, complete sequence Length = 226794 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 217522 ggcacacacatacagacaca 217503
>gb|AC155949.8| Mus musculus 6 BAC RP24-407P20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cacacatacagacacaacacatac 181 |||||||||| ||||||||||||| Sbjct: 11413 cacacatacatacacaacacatac 11436
>emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chromosome 2, complete sequence Length = 61741 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 4231 ggcacacacatacagacaca 4250
>gb|AC068294.26|AC068294 Mus musculus 3 BAC RP23-418O21 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 201750 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 111645 ggcacacacatacagacaca 111664
>gb|AC068418.5| Homo sapiens chromosome 17, clone RP11-728E14, complete sequence Length = 202992 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 74984 ggcacacacatacagacaca 75003
>gb|AC022236.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-425I8, complete sequence Length = 198392 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacaca 178 ||||||||||||| |||||||||| Sbjct: 9097 gcacacacatacacacacaacaca 9120
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacaca 178 ||||||||||||| |||||||||| Sbjct: 120314 gcacacacatacacacacaacaca 120337
>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete sequence Length = 93822 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 53348 cacacacatacacacacaacacat 53325
>dbj|AK000356.1| Homo sapiens cDNA FLJ20349 fis, clone HEP13957, highly similar to AB011120 Homo sapiens mRNA for KIAA0548 protein Length = 2578 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cacacatacagacacaacacatac 181 |||||||||| ||||||||||||| Sbjct: 2455 cacacatacacacacaacacatac 2478
>emb|AL928733.14| Mouse DNA sequence from clone RP23-190O13 on chromosome 2, complete sequence Length = 110511 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 64203 ggcacacacatacagacaca 64222
>emb|CR352301.7| Zebrafish DNA sequence from clone CH211-147A11 in linkage group 8, complete sequence Length = 176256 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaa 174 |||||||||||||||||||| Sbjct: 134224 gcacacacatacagacacaa 134205
>emb|BX005306.20| Zebrafish DNA sequence from clone DKEY-78C7 in linkage group 20, complete sequence Length = 135228 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gcacacacatacagacacaa 174 |||||||||||||||||||| Sbjct: 33396 gcacacacatacagacacaa 33377
>gb|AC175032.1| Mus musculus BAC clone RP24-222L21 from chromosome 14, complete sequence Length = 204872 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 202816 ggcacacacatacagacaca 202835 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 63061 ggcacacacatacagacaca 63080
>gb|AC174723.2| Mus musculus BAC clone RP23-93L3 from chromosome 14, complete sequence Length = 153644 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 76542 ggcacacacatacagacaca 76561
>gb|AC174479.2| Mus musculus BAC clone RP23-100J17 from chromosome 14, complete sequence Length = 185390 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 92503 ggcacacacatacagacaca 92484
>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence Length = 207210 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 185119 ggcacacacatacagacaca 185138
>gb|AC005242.1|AC005242 Homo sapiens chromosome 17, clone hRPK.118_F_13, complete sequence Length = 160262 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 13763 ggcacacacatacagacaca 13744
>gb|AC129222.4| Mus musculus BAC clone RP24-532L14 from 14, complete sequence Length = 181469 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 54878 cacacacatacacacacaacacat 54901
>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE Length = 89591 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacata 180 ||||||| |||||||||||||||| Sbjct: 52926 acacacagacagacacaacacata 52903
>gb|AC140337.3| Mus musculus BAC clone RP23-238H7 from 1, complete sequence Length = 229594 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cacacatacagacacaacacatac 181 |||||||||||||||| ||||||| Sbjct: 49833 cacacatacagacacatcacatac 49856
>gb|AC174052.1| Homo sapiens chromosome 6 clone WI2-828O19, complete sequence Length = 40298 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 155 gcacacacatacagacacaacaca 178 ||||||||||||| |||||||||| Sbjct: 10717 gcacacacatacacacacaacaca 10740
>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete sequence Length = 193813 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 76695 cacacacatacacacacaacacat 76718
>emb|BX088728.23| Zebrafish DNA sequence from clone CH211-126J24, complete sequence Length = 168184 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cacacacatacagacacaacacat 179 |||||||||||| ||||||||||| Sbjct: 22549 cacacacatacacacacaacacat 22526
>gb|AC113144.11| Homo sapiens chromosome 17, clone RP11-45G12, complete sequence Length = 149288 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 146712 ggcacacacatacagacaca 146693
>gb|AC087899.40| Mus musculus strain C57BL/6J chromosome 19 clone rp23-170m6, complete sequence Length = 194291 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 acacacatacagacacaacacata 180 ||||||||||||||| |||||||| Sbjct: 21382 acacacatacagacaaaacacata 21359
>gb|AC169037.4| Mus musculus BAC clone RP23-85E20 from chromosome 16, complete sequence Length = 184591 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 acacacatacagacacaacacata 180 ||||||||||||||| |||||||| Sbjct: 177960 acacacatacagacaaaacacata 177983
>gb|AC164092.3| Mus musculus BAC clone RP23-366E4 from chromosome 9, complete sequence Length = 203636 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acacatacagacacaacaca 178 |||||||||||||||||||| Sbjct: 159007 acacatacagacacaacaca 158988 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acacatacagacacaacaca 178 |||||||||||||||||||| Sbjct: 158972 acacatacagacacaacaca 158953
>gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome 9, complete sequence Length = 170322 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 93893 ggcacacacatacagacaca 93912
>gb|AC165285.2| Mus musculus BAC clone RP24-235I1 from chromosome 14, complete sequence Length = 171474 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 112669 ggcacacacatacagacaca 112688
>emb|AL513345.20| Mouse DNA sequence from clone RP23-129N7 on chromosome 15, complete sequence Length = 217225 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 202987 ggcacacacatacagacaca 202968
>gb|M57718.1|RATCYP4A1 Rat cytochrome P-450 IV A1 (CYP4A1) gene, complete cds Length = 16299 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 cacacatacagacacaacacatac 181 |||||||||| ||||||||||||| Sbjct: 15283 cacacatacacacacaacacatac 15306
>dbj|AB057676.1| Oryzias latipes GnRH-R2 gene for gonadotropin-releasing hormone receptor 2, complete cds Length = 11621 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcacacacatacagacaca 173 |||||||||||||||||||| Sbjct: 192 ggcacacacatacagacaca 173 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,945,692 Number of Sequences: 3902068 Number of extensions: 2945692 Number of successful extensions: 160822 Number of sequences better than 10.0: 157 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 159608 Number of HSP's gapped (non-prelim): 1180 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
