>C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)|
          Length = 553

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -1

Query: 266 PGHVVEPKLSVILHMKNGLAVPVKRRNV 183
           PGH VE K+S+ L MKNGL V V +R++
Sbjct: 486 PGHKVEQKMSLTLFMKNGLLVNVHKRDL 513

>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)|
           (P450-dependent fatty acid omega-hydroxylase)
          Length = 513

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -1

Query: 293 LWNFVVEAVPGHVVEPKLSVILHMKNGLAVPVKRRNVV 180
           L  + V  VPGH VE K+S+ L MKNGL V ++ R  V
Sbjct: 474 LLRYRVFPVPGHRVEQKMSLTLFMKNGLRVYLQPRGEV 511

>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing|
           protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD
           and RING finger domains protein 1) (Liver
           regeneration-related protein LRRG126)
          Length = 774

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 214 GSPSRSKGGTSFQACMLPQSKYCCLCSC 131
           GSPSR K G S Q C   ++K C  C+C
Sbjct: 288 GSPSRRKSGPSCQYCKDDENKPCRKCAC 315

>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 11/78 (14%)
 Frame = -2

Query: 244 SCPSYST*RTGSPSRSKGGTSFQACMLPQ-----------SKYCCLCSCKRPWCPLALFV 98
           SC S      GS   SKGG     C                  CC CSC +P+C      
Sbjct: 53  SCSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCC 112

Query: 97  QASMVSMVGGSTSLKMTC 44
           +    S   GS+  + +C
Sbjct: 113 KPCCSSSGRGSSCCQSSC 130

>AMER1_HUMAN (Q9Y4X0) AMME syndrome candidate gene 1 protein|
          Length = 333

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -2

Query: 289 GTLLSRPCRGTSWNPSCPSYST*RTGSPSRSKGGTSFQACMLPQSKYCCLC 137
           GTLLS P   TS +PS  S ++  + SP   K        M+  ++ CC C
Sbjct: 94  GTLLSTPAAATSSSPSSSSAAS--SSSPGSRK--------MVVSAEMCCFC 134

>TEP1_RAT (O08653) Telomerase protein component 1 (rTLP1)|
            (Telomerase-associated protein 1) (Telomerase protein 1)
            (p240) (p230) (p80 telomerase homolog)
          Length = 2629

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +1

Query: 124  DACTNTSSSIYSGVACTPETTFLLLTGTASPFFMWSMTDNLGSTTCPGTAS 276
            D C   SS++ + VA  P+ + ++    A    +W     + +   PG  S
Sbjct: 2283 DTCKPRSSAVITAVAWAPDGSLVVSGNEAGELTLWQKAQAVATARAPGRVS 2333

>RBF_DROME (Q24472) Retinoblastoma-family protein|
          Length = 845

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 251 EPKLSVILHMKNGLAVPVKRRNVVSGVHATPE 156
           EPK+  I+H  N   VP+ R+ V+  ++ TP+
Sbjct: 686 EPKVKDIIHFYNHTYVPLMRQFVIDYLNVTPD 717

>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein|
           4.5) (Ultrahigh sulfur keratin-associated protein 4.5)
          Length = 186

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
 Frame = -2

Query: 268 CRGTSWNPSC--PSYST*RTGSPSRSKGGTSFQACMLPQSKYCCLCSCKRPWC 116
           CR T   PSC  P         P+         +C  P   YCC  SC RP C
Sbjct: 31  CRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCISSCCRP---YCCESSCCRPCC 80

>PDFR_DROME (Q9W4Y2) PDF receptor (Protein groom-of-PDF)|
          Length = 669

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 124 DACTNTSSSIYSGVACTPETTFLLLTGTASPFFMWSMTDNL 246
           +A TNTS S+        E +++LL    +  FMW   + L
Sbjct: 304 EAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGL 344

>DLLH_BRAFL (P53772) Homeobox protein DLL homolog|
          Length = 321

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 12/50 (24%)
 Frame = +2

Query: 44  TCHLQRRTTSD----------HGHHGRLHEQS*WTPWTLA--RTQAAVFT 157
           TCH QRRT +D          +  HG LHE S   P ++A   T AA+ T
Sbjct: 251 TCHDQRRTNADLLPTRMGRQQYQSHGELHELSPLLPLSMALPGTAAAIPT 300

>NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform precursor|
           (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)]
          Length = 720

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +1

Query: 55  STTYYLRPWTP-WTLARTKLMDTMDACTNTSSSIYSGVACTPETT 186
           +T+ YL   TP WTL+  +     DA +++SSS  S    TPET+
Sbjct: 230 ATSSYLHDSTPSWTLSPFQ-----DAASSSSSSSSSATTTTPETS 269

>HSP1_PIG (P04101) Sperm protamine P1 (Cysteine-rich protamine)|
          Length = 49

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -3

Query: 225 HEERARRPGQKEERRFRRACYPRVNTAACVR 133
           H     RP ++  RR RR C PR   A C R
Sbjct: 9   HSRSRCRPRRRRCRRRRRRCCPRRRRAVCCR 39

>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein|
           4.9) (Ultrahigh sulfur keratin-associated protein 4.9)
           (Fragment)
          Length = 191

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 14/73 (19%)
 Frame = -2

Query: 292 CGTLLSRP-------CRGTSWNPSCPSYST*RTG-------SPSRSKGGTSFQACMLPQS 155
           C    SRP       CR T + PSC   S  R          P+  +       C  P+ 
Sbjct: 41  CQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPVCCQPTCCRPSCCETTCCHPR- 99

Query: 154 KYCCLCSCKRPWC 116
             CC+ SC RP C
Sbjct: 100 --CCISSCCRPSC 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,320,355
Number of Sequences: 219361
Number of extensions: 846124
Number of successful extensions: 2782
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)