ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 84 3e-13
2gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome... 84 3e-13
3gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare str... 84 3e-13
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 84 3e-13
5dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 3e-13
6gb|AY109756.1| Zea mays CL309_1 mRNA sequence 78 2e-11
7dbj|AK061292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 7e-08
8dbj|AK119195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
9dbj|AK067844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
10emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 i... 44 0.25
11gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, com... 42 0.97
12gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, comp... 42 0.97
13gb|AC069553.6|AC069553 Genomic Sequence For Arabidopsis thaliana... 42 0.97
14dbj|AB046440.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 42 0.97
15emb|BX470100.6| Zebrafish DNA sequence from clone DKEY-239K7 in ... 42 0.97
16gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Canc... 40 3.8
17gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, co... 40 3.8
18gb|AC183801.3| Pan troglodytes BAC clone CH251-162F3 from chromo... 40 3.8
19gb|AC109269.17| Mus musculus chromosome 1, clone RP23-325F17, co... 40 3.8
20gb|AC141893.4| Mus musculus BAC clone RP23-324F17 from chromosom... 40 3.8
21gb|AC125541.4| Mus musculus BAC clone RP23-237I10 from chromosom... 40 3.8
22ref|XM_726261.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 3.8
23ref|XM_733996.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 3.8
24ref|XM_668050.1| Plasmodium berghei strain ANKA hypothetical pro... 40 3.8
25gb|AC155317.5| Mus musculus BAC clone RP23-89D6 from chromosome ... 40 3.8
26emb|AL645476.26| Mouse DNA sequence from clone RP23-70L6 on chro... 40 3.8
27emb|BX548008.7| Zebrafish DNA sequence from clone DKEY-220G10 in... 40 3.8
28gb|AC007542.3| Homo sapiens 12p12 BAC RPCI11-320J20 (Roswell Par... 40 3.8
29dbj|AK081595.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 3.8
30gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromos... 40 3.8
31gb|AC137976.13| Mus musculus chromosome 8, clone RP23-262K12, co... 40 3.8
32gb|AC171061.3| Gallus gallus BAC clone TAM32-9O12 from chromosom... 40 3.8
33gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, comple... 40 3.8
34gb|AC125358.4| Mus musculus BAC clone RP23-256E3 from 8, complet... 40 3.8 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                           
Query: 210     gagcccgttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcac 269
               |||||| ||||||||||||||||||||||||| | | || ||||||||||||||||||||
Sbjct: 2206727 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 2206668

                                     
Query: 270     ggcctcgacaacaaagttccac 291
                 |||| ||  |||||||||||
Sbjct: 2206667 cacctccacggcaaagttccac 2206646



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                           
Query: 189     cctccttttgaccgggacggcgagcccgttcttcatgtggagtatgacggacaacttggg 248
               |||||| ||||||| ||| |||||||| ||||||||||| || |||| ||||| ||| ||
Sbjct: 2195149 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 2195090

                                    
Query: 249     ttccacgacgtgccccggcac 269
                || ||| |||||||||||||
Sbjct: 2195089 ctcgacggcgtgccccggcac 2195069



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                           
Query: 217     ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
               ||||||||||||||||||| ||| | |||||| ||||||||||| || |  |||||||||
Sbjct: 2183069 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 2183010

                
Query: 277     a 277
               |
Sbjct: 2183009 a 2183009



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                           
Query: 217     ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
               |||||||||||||| |  | ||||| |||||| |||||||  || || ||||||||||||
Sbjct: 2153471 ttcttcatgtggagaaccatggacagcttgggctccacgatatgtcctggcacggcctcg 2153412

                
Query: 277     a 277
               |
Sbjct: 2153411 a 2153411
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>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0030C11, complete sequence
          Length = 156647

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 210   gagcccgttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcac 269
             |||||| ||||||||||||||||||||||||| | | || ||||||||||||||||||||
Sbjct: 97021 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 96962

                                   
Query: 270   ggcctcgacaacaaagttccac 291
               |||| ||  |||||||||||
Sbjct: 96961 cacctccacggcaaagttccac 96940



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                         
Query: 189   cctccttttgaccgggacggcgagcccgttcttcatgtggagtatgacggacaacttggg 248
             |||||| ||||||| ||| |||||||| ||||||||||| || |||| ||||| ||| ||
Sbjct: 85443 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 85384

                                  
Query: 249   ttccacgacgtgccccggcac 269
              || ||| |||||||||||||
Sbjct: 85383 ctcgacggcgtgccccggcac 85363



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 217   ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
             ||||||||||||||||||| ||| | |||||| ||||||||||| || |  |||||||||
Sbjct: 73363 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 73304

              
Query: 277   a 277
             |
Sbjct: 73303 a 73303



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 217   ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
             |||||||||||||| |  | ||||| |||||| |||||||  || || ||||||||||||
Sbjct: 43765 ttcttcatgtggagaaccatggacagcttgggctccacgatatgtcctggcacggcctcg 43706

              
Query: 277   a 277
             |
Sbjct: 43705 a 43705
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>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0081A17, from chromosome 3, complete sequence
          Length = 134821

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                          
Query: 210    gagcccgttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcac 269
              |||||| ||||||||||||||||||||||||| | | || ||||||||||||||||||||
Sbjct: 119329 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 119388

                                    
Query: 270    ggcctcgacaacaaagttccac 291
                |||| ||  |||||||||||
Sbjct: 119389 cacctccacggcaaagttccac 119410



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 189    cctccttttgaccgggacggcgagcccgttcttcatgtggagtatgacggacaacttggg 248
              |||||| ||||||| ||| |||||||| ||||||||||| || |||| ||||| ||| ||
Sbjct: 130907 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 130966

                                   
Query: 249    ttccacgacgtgccccggcac 269
               || ||| |||||||||||||
Sbjct: 130967 ctcgacggcgtgccccggcac 130987
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                           
Query: 210     gagcccgttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcac 269
               |||||| ||||||||||||||||||||||||| | | || ||||||||||||||||||||
Sbjct: 2206739 gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 2206680

                                     
Query: 270     ggcctcgacaacaaagttccac 291
                 |||| ||  |||||||||||
Sbjct: 2206679 cacctccacggcaaagttccac 2206658



 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                           
Query: 189     cctccttttgaccgggacggcgagcccgttcttcatgtggagtatgacggacaacttggg 248
               |||||| ||||||| ||| |||||||| ||||||||||| || |||| ||||| ||| ||
Sbjct: 2195161 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 2195102

                                    
Query: 249     ttccacgacgtgccccggcac 269
                || ||| |||||||||||||
Sbjct: 2195101 ctcgacggcgtgccccggcac 2195081



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                           
Query: 217     ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
               ||||||||||||||||||| ||| | |||||| ||||||||||| || |  |||||||||
Sbjct: 2183081 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 2183022

                
Query: 277     a 277
               |
Sbjct: 2183021 a 2183021



 Score = 42.1 bits (21), Expect = 0.97
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                           
Query: 217     ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
               |||||||||||||| |  | ||||| |||||| |||||||  || || ||||||||||||
Sbjct: 2153483 ttcttcatgtggagaaccatggacagcttgggctccacgatatgtcctggcacggcctcg 2153424

                
Query: 277     a 277
               |
Sbjct: 2153423 a 2153423
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>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full
           insert sequence
          Length = 1935

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 72/82 (87%)
 Strand = Plus / Plus

                                                                       
Query: 210 gagcccgttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcac 269
           |||||| ||||||||||||||||||||||||| | | || ||||||||||||||||||||
Sbjct: 88  gagcccattcttcatgtggagtatgacggacagcctcggctccacgacgtgccccggcac 147

                                 
Query: 270 ggcctcgacaacaaagttccac 291
             |||| ||  |||||||||||
Sbjct: 148 cacctccacggcaaagttccac 169
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>gb|AY109756.1| Zea mays CL309_1 mRNA sequence
          Length = 1914

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                       
Query: 217  ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctc 275
            ||||||||||| ||||||| ||||| |||||| |||||||||||||||||||| |||||
Sbjct: 1585 ttcttcatgtgaagtatgatggacagcttgggctccacgacgtgccccggcaccgcctc 1527
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>dbj|AK061292.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B03, full
           insert sequence
          Length = 1120

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 189 cctccttttgaccgggacggcgagcccgttcttcatgtggagtatgacggacaacttggg 248
           |||||| ||||||| ||| |||||||| ||||||||||| || |||| ||||| ||| ||
Sbjct: 701 cctcctcttgaccgtgacagcgagcccattcttcatgtgcaggatgatggacagcttcgg 642

                                
Query: 249 ttccacgacgtgccccggcac 269
            || ||| |||||||||||||
Sbjct: 641 ctcgacggcgtgccccggcac 621
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>dbj|AK119195.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C06, full
            insert sequence
          Length = 1658

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 217  ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
            ||||||||||||||||||| ||| | |||||| ||||||||||| || |  |||||||||
Sbjct: 1523 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 1464

             
Query: 277  a 277
            |
Sbjct: 1463 a 1463
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>dbj|AK067844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125N12, full
            insert sequence
          Length = 1549

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 217  ttcttcatgtggagtatgacggacaacttgggttccacgacgtgccccggcacggcctcg 276
            ||||||||||||||||||| ||| | |||||| ||||||||||| || |  |||||||||
Sbjct: 1386 ttcttcatgtggagtatgatggagagcttgggctccacgacgtggccggcaacggcctcg 1327

             
Query: 277  a 277
            |
Sbjct: 1326 a 1326
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>emb|AL929003.17| Zebrafish DNA sequence from clone DKEY-235D18 in linkage group 20,
              complete sequence
          Length = 175099

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 11     atatatatatactactaaaattatag 36
              |||||||||||||||||||| |||||
Sbjct: 131641 atatatatatactactaaaagtatag 131616
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>gb|AC168309.2| Mus musculus chromosome 1, clone wi1-2866I16, complete sequence
          Length = 40737

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 145  agcagtatttactctggggta 165
            |||||||||||||||||||||
Sbjct: 3291 agcagtatttactctggggta 3311
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>gb|AC102374.7| Mus musculus chromosome 1, clone RP23-278G2, complete sequence
          Length = 170448

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   agcagtatttactctggggta 165
             |||||||||||||||||||||
Sbjct: 25299 agcagtatttactctggggta 25279
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>gb|AC069553.6|AC069553 Genomic Sequence For Arabidopsis thaliana Clone F18A12 From Chromosome
             V, complete sequence
          Length = 133529

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    atatatatatactactaaaat 31
             |||||||||||||||||||||
Sbjct: 65434 atatatatatactactaaaat 65454
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>dbj|AB046440.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F5K15
          Length = 96684

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    atatatatatactactaaaat 31
             |||||||||||||||||||||
Sbjct: 74768 atatatatatactactaaaat 74788
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>emb|BX470100.6| Zebrafish DNA sequence from clone DKEY-239K7 in linkage group 18,
             complete sequence
          Length = 117304

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    atatatatatactactaaaat 31
             |||||||||||||||||||||
Sbjct: 43950 atatatatatactactaaaat 43970
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>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 251631

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ataaaaggatatatatatac 22
             ||||||||||||||||||||
Sbjct: 90214 ataaaaggatatatatatac 90195
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>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence
          Length = 222869

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     aaattatagcagttacacat 47
              ||||||||||||||||||||
Sbjct: 137041 aaattatagcagttacacat 137022
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>gb|AC183801.3| Pan troglodytes BAC clone CH251-162F3 from chromosome 19, complete
              sequence
          Length = 193838

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      gataaaaggatatatatata 21
              ||||||||||||||||||||
Sbjct: 111575 gataaaaggatatatatata 111594
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>gb|AC109269.17| Mus musculus chromosome 1, clone RP23-325F17, complete sequence
          Length = 219191

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     atatatatactactaaaatt 32
              ||||||||||||||||||||
Sbjct: 199795 atatatatactactaaaatt 199776
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>gb|AC141893.4| Mus musculus BAC clone RP23-324F17 from chromosome 15, complete
             sequence
          Length = 182603

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    tcttcaacgacgtactacctccga 75
             |||||||||| |||||||||||||
Sbjct: 72414 tcttcaacgaggtactacctccga 72437
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>gb|AC125541.4| Mus musculus BAC clone RP23-237I10 from chromosome 15, complete
             sequence
          Length = 215447

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    tcttcaacgacgtactacctccga 75
             |||||||||| |||||||||||||
Sbjct: 34786 tcttcaacgaggtactacctccga 34763
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>ref|XM_726261.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03353)
            partial mRNA
          Length = 4874

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   atatatactactaaaattat 34
            ||||||||||||||||||||
Sbjct: 4425 atatatactactaaaattat 4406
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>ref|XM_733996.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301812.00.0)
           partial mRNA
          Length = 1050

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 12  tatatatatactactaaaattata 35
           |||||||||| |||||||||||||
Sbjct: 480 tatatatatattactaaaattata 457
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>ref|XM_668050.1| Plasmodium berghei strain ANKA hypothetical protein (PB000402.02.0)
            partial mRNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 12   tatatatatactactaaaattata 35
            |||||||||| |||||||||||||
Sbjct: 1296 tatatatatattactaaaattata 1273
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>gb|AC155317.5| Mus musculus BAC clone RP23-89D6 from chromosome 15, complete sequence
          Length = 251377

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     tcttcaacgacgtactacctccga 75
              |||||||||| |||||||||||||
Sbjct: 208234 tcttcaacgaggtactacctccga 208211
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>emb|AL645476.26| Mouse DNA sequence from clone RP23-70L6 on chromosome 11 Contains a CpG
             island, complete sequence
          Length = 143728

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    gtactacctccgaccatgga 82
             ||||||||||||||||||||
Sbjct: 45077 gtactacctccgaccatgga 45096
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>emb|BX548008.7| Zebrafish DNA sequence from clone DKEY-220G10 in linkage group 23,
             complete sequence
          Length = 186246

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gataaaaggatatatatata 21
             ||||||||||||||||||||
Sbjct: 58476 gataaaaggatatatatata 58457



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gataaaaggatatatatata 21
             ||||||||||||||||||||
Sbjct: 58439 gataaaaggatatatatata 58458
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>gb|AC007542.3| Homo sapiens 12p12 BAC RPCI11-320J20 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 162081

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      aggatatatatatactacta 27
              ||||||||||||||||||||
Sbjct: 102290 aggatatatatatactacta 102271
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>dbj|AK081595.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130048L04 product:unclassifiable, full
            insert sequence
          Length = 2192

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   atatatatactactaaaatt 32
            ||||||||||||||||||||
Sbjct: 2130 atatatatactactaaaatt 2149
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>gb|AC171009.3| Gallus gallus BAC clone CH261-146H18 from chromosome ul, complete
             sequence
          Length = 197416

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    atatatatatactactaaaattat 34
             |||||||||||| |||||||||||
Sbjct: 72064 atatatatatacaactaaaattat 72087
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>gb|AC137976.13| Mus musculus chromosome 8, clone RP23-262K12, complete sequence
          Length = 238720

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gatatatatatactactaaa 29
             ||||||||||||||||||||
Sbjct: 50165 gatatatatatactactaaa 50184
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>gb|AC171061.3| Gallus gallus BAC clone TAM32-9O12 from chromosome ul, complete
             sequence
          Length = 131280

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    atatatatatactactaaaattat 34
             |||||||||||| |||||||||||
Sbjct: 89450 atatatatatacaactaaaattat 89473
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>gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, complete sequence
          Length = 224972

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     atatatatactactaaaatt 32
              ||||||||||||||||||||
Sbjct: 188742 atatatatactactaaaatt 188761
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>gb|AC125358.4| Mus musculus BAC clone RP23-256E3 from 8, complete sequence
          Length = 177236

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     gatatatatatactactaaa 29
              ||||||||||||||||||||
Sbjct: 158504 gatatatatatactactaaa 158523


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,232,887
Number of Sequences: 3902068
Number of extensions: 11232887
Number of successful extensions: 52193
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52074
Number of HSP's gapped (non-prelim): 119
length of query: 293
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 271
effective length of database: 17,147,199,772
effective search space: 4646891138212
effective search space used: 4646891138212
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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