Clone Name | rbaet95d02 |
---|---|
Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 67.8 bits (164), Expect = 1e-11 Identities = 42/95 (44%), Positives = 48/95 (50%), Gaps = 11/95 (11%) Frame = -2 Query: 418 SFAKNPKQFGFEQGPLKTCCGGGGPYNFNPTASCG-----------VRGSSVCADPSAYA 272 S P++ GFE PL TCCG GG YNF+ TA CG V GS CA PS Sbjct: 288 SLFSEPEKHGFEF-PLITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGS--CACPSVRV 344 Query: 271 NWDGVHLTEAAYHAIADSILHGPYTSPRLL*PPAC 167 NWDG H TEAA D I G ++ P + AC Sbjct: 345 NWDGAHYTEAANEYFFDQISTGAFSDPPVPLNMAC 379
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 54.7 bits (130), Expect = 9e-08 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 9/68 (13%) Frame = -2 Query: 382 QGPLKTCCGGGGPYNFNPTASCG----VRGSSV-----CADPSAYANWDGVHLTEAAYHA 230 +G L +CCG GG YN+N CG V+G V C +P WDGVH T+AA Sbjct: 297 KGSLVSCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQAANKF 356 Query: 229 IADSILHG 206 I D I G Sbjct: 357 IFDKIAPG 364
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 42.0 bits (97), Expect = 6e-04 Identities = 23/61 (37%), Positives = 31/61 (50%) Frame = -2 Query: 409 KNPKQFGFEQGPLKTCCGGGGPYNFNPTASCGVRGSSVCADPSAYANWDGVHLTEAAYHA 230 + P +GFE+ K CC G + A C S +C + S+Y WDGVH T+ AY Sbjct: 464 ETPAAYGFEETK-KPCCKTG---LLSAGALCKKSTSKICPNTSSYLFWDGVHPTQRAYKT 519 Query: 229 I 227 I Sbjct: 520 I 520
>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1197 Score = 31.6 bits (70), Expect = 0.79 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +3 Query: 276 YADGSAHTLDPRTPQLA--VGLKLYGPPPPQHVFSGPCS 386 Y DG L P +PQ V GPPPP +SGP S Sbjct: 496 YGDGYGFRLPPSSPQKLADVSAPSGGPPPPHSPYSGPPS 534
>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1250 Score = 31.6 bits (70), Expect = 0.79 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +3 Query: 276 YADGSAHTLDPRTPQLA--VGLKLYGPPPPQHVFSGPCS 386 Y DG L P +PQ V GPPPP +SGP S Sbjct: 528 YGDGYGFRLPPSSPQKLADVSAPSGGPPPPHSPYSGPPS 566
>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1055 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +3 Query: 276 YADGSAHTLDPRTPQLA--VGLKLYGPPPPQHVFSGPCS 386 Y DG L P +PQ V GPPPP +SGP S Sbjct: 334 YGDGYGFRLPPSSPQKLADVAAPPGGPPPPHSPYSGPPS 372
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = -2 Query: 409 KNPKQFGFEQGPLKTCCG----GGGPYNFNPTASCGVRGSSVCADPSAYANWDGVHLTEA 242 ++P+ +GFE+ K CC GG + C R ++ S+Y WDG+H ++ Sbjct: 381 ESPEDYGFEEIK-KPCCKIGLTKGGVF-------CKERTLKNMSNASSYLFWDGLHPSQR 432 Query: 241 AY 236 AY Sbjct: 433 AY 434
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = +3 Query: 261 PSQLAYADGSAHTLDPRTPQLAVGLKLYGPPPPQHVFSG---PCSNP 392 P + + GS H L P +P L+ PPPP HV +G P S+P Sbjct: 412 PGGSSPSPGSGHPLPPASPHHVPPLQ-QQPPPPPHVSAGGPPPSSSP 457
>FIBL_GALME (Q26427) Fibroin light chain precursor (Fib-L) (L-fibroin) (PG-1)| Length = 267 Score = 29.3 bits (64), Expect = 3.9 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = -2 Query: 412 AKNPKQFGFEQGPLKTCCGGGGPYNF 335 A NP + GP C GGG Y F Sbjct: 146 ASNPDSLRYSSGPAGNCAGGGRSYQF 171
>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) Length = 1110 Score = 29.3 bits (64), Expect = 3.9 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 9/51 (17%) Frame = +3 Query: 285 GSAHTLDPRTPQLAVGLKLYGPPPP---------QHVFSGPCSNPNCLGFL 410 G+ H+ P P L G + PPPP + FSGP P LGFL Sbjct: 569 GTGHSALPPPPPLPSGGGVPPPPPPPPPPPLPGMRMPFSGPVPPPPPLGFL 619
>AMER1_HUMAN (Q9Y4X0) AMME syndrome candidate gene 1 protein| Length = 333 Score = 28.5 bits (62), Expect = 6.7 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = -2 Query: 391 GFEQGPLKTCCGGGGPYNFNPTASCGVRGSSVCADPSAYANWDGVHLTEAAYHAIADSIL 212 G P + C GGGG +P SCGV ++ + P+A + + + + A S Sbjct: 67 GCTLSPPQGCGGGGGGIALSPPPSCGV--GTLLSTPAAATS------SSPSSSSAASSSS 118 Query: 211 HGPYTSPRLL*PPACFCFCFSSVLAC 134 G S +++ CFCF VL C Sbjct: 119 PG---SRKMVVSAEMCCFCF-DVLYC 140
>ITA10_HUMAN (O75578) Integrin alpha-10 precursor| Length = 1167 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = +3 Query: 204 GPWRMLSAMAW*AASVRWTPSQLAYADGSAHTLDPRTPQLAVG 332 G W M + A+ WT A DGS L PR +L+VG Sbjct: 690 GRWDHQFYMRFTASLDEWTAGARAAFDGSGQRLSPRRLRLSVG 732
>FOXE1_MOUSE (Q8R2I0) Forkhead box protein E1 (Thyroid transcription factor 2)| (TTF-2) Length = 371 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 358 GGGGPYNFNPTASCGVRGSSVCADPSAYANWDGVHL--TEAAYHAIADSILHGPYTSP 191 G G +F P G R + A +AYA DG + +A A A L GP + P Sbjct: 250 GAAGTGSFQPAVCTGARPVNPAAYAAAYAGPDGAYPQGASSALFAAAAGRLAGPASPP 307 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,241,305 Number of Sequences: 219361 Number of extensions: 812701 Number of successful extensions: 2867 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2710 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2863 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)