Clone Name | rbaet95d02 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA sequence Length = 1342 Score = 464 bits (234), Expect = e-127 Identities = 249/254 (98%) Strand = Plus / Minus Query: 169 aggctgggggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcga 228 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1215 aggctgagggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcga 1156 Query: 229 tggcgtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggt 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 tggcgtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggt 1096 Query: 289 cggcgcacacgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggcc 348 |||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| Sbjct: 1095 cggcgcacacgctggacccccgcacgccgcagctcgccttggggttgaagttgtacggcc 1036 Query: 349 ccccgccgccgcagcacgtcttcagcggcccctgctcgaacccgaactgcttggggttct 408 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1035 ccccgccgccgcagcacgtcttcagcggcccctgcttgaacccgaactgcttggggttct 976 Query: 409 tggcgaaggacatg 422 |||||||||||||| Sbjct: 975 tggcgaaggacatg 962
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full insert sequence Length = 1452 Score = 345 bits (174), Expect = 7e-92 Identities = 228/246 (92%) Strand = Plus / Minus Query: 177 ggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtgg 236 |||||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||| Sbjct: 1190 ggtcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtgg 1131 Query: 237 taggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcac 296 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1130 tagccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcac 1071 Query: 297 acgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccg 356 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 1070 acgctggagccccgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccg 1011 Query: 357 ccgcagcacgtcttcagcggcccctgctcgaacccgaactgcttggggttcttggcgaag 416 |||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 1010 ccgcagcacgtcctcagcgccccgtgcctgaacccgaactgcttggggttctgggcgaag 951 Query: 417 gacatg 422 |||||| Sbjct: 950 gacatg 945
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full insert sequence Length = 1577 Score = 345 bits (174), Expect = 7e-92 Identities = 228/246 (92%) Strand = Plus / Minus Query: 177 ggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtgg 236 |||||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||| Sbjct: 1190 ggtcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtgg 1131 Query: 237 taggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcac 296 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1130 tagccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcac 1071 Query: 297 acgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccg 356 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 1070 acgctggagccccgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccg 1011 Query: 357 ccgcagcacgtcttcagcggcccctgctcgaacccgaactgcttggggttcttggcgaag 416 |||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 1010 ccgcagcacgtcctcagcgccccgtgcctgaacccgaactgcttggggttctgggcgaag 951 Query: 417 gacatg 422 |||||| Sbjct: 950 gacatg 945
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full insert sequence Length = 1691 Score = 345 bits (174), Expect = 7e-92 Identities = 228/246 (92%) Strand = Plus / Minus Query: 177 ggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtgg 236 |||||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||| Sbjct: 1450 ggtcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtgg 1391 Query: 237 taggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcac 296 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1390 tagccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcac 1331 Query: 297 acgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccg 356 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 1330 acgctggagccccgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccg 1271 Query: 357 ccgcagcacgtcttcagcggcccctgctcgaacccgaactgcttggggttcttggcgaag 416 |||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 1270 ccgcagcacgtcctcagcgccccgtgcctgaacccgaactgcttggggttctgggcgaag 1211 Query: 417 gacatg 422 |||||| Sbjct: 1210 gacatg 1205
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA Length = 1125 Score = 341 bits (172), Expect = 1e-90 Identities = 226/244 (92%) Strand = Plus / Minus Query: 179 tcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtggta 238 |||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||||| Sbjct: 1125 tcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtggta 1066 Query: 239 ggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcacac 298 | ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1065 gccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcacac 1006 Query: 299 gctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccgcc 358 |||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||||| Sbjct: 1005 gctggagccccgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccgcc 946 Query: 359 gcagcacgtcttcagcggcccctgctcgaacccgaactgcttggggttcttggcgaagga 418 |||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||||||||| Sbjct: 945 gcagcacgtcctcagcgccccgtgcctgaacccgaactgcttggggttctgggcgaagga 886 Query: 419 catg 422 |||| Sbjct: 885 catg 882
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full insert sequence Length = 1520 Score = 337 bits (170), Expect = 2e-89 Identities = 227/246 (92%) Strand = Plus / Minus Query: 177 ggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtgg 236 |||||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||| Sbjct: 1187 ggtcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtgg 1128 Query: 237 taggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcac 296 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1127 tagccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcac 1068 Query: 297 acgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccg 356 |||||||| ||| ||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 1067 acgctggagccctgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccg 1008 Query: 357 ccgcagcacgtcttcagcggcccctgctcgaacccgaactgcttggggttcttggcgaag 416 |||||||||||| |||||| ||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 1007 ccgcagcacgtcctcagcgccccgtgcctgaacccgaactgcttggggttctgggcgaag 948 Query: 417 gacatg 422 |||||| Sbjct: 947 gacatg 942
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 291 bits (147), Expect = 9e-76 Identities = 186/199 (93%) Strand = Plus / Minus Query: 177 ggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtgg 236 |||||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||| Sbjct: 6321066 ggtcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtgg 6321007 Query: 237 taggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcac 296 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 6321006 tagccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcac 6320947 Query: 297 acgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccg 356 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 6320946 acgctggagccccgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccg 6320887 Query: 357 ccgcagcacgtcttcagcg 375 |||||||||||| |||||| Sbjct: 6320886 ccgcagcacgtcctcagcg 6320868 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 233 gtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggc 292 |||||| || ||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct: 6305212 gtggtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgcc 6305153 Query: 293 gcacacg 299 ||||||| Sbjct: 6305152 gcacacg 6305146 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||||||||||||||||||||||||| Sbjct: 6362385 gtaggccgcctccgtcaggtggacgccgtcccagttg 6362349 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 324 gccgtcgggttgaagttgtacggccccccgccgccgcagcacg 366 ||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 6362297 gccgtcgcgttgtagttgtaccgccccccgccgccgcagcacg 6362255 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 390 ccgaactgcttggggttcttggcgaaggacatg 422 ||||||||||||||||||| ||||||||||||| Sbjct: 6319666 ccgaactgcttggggttctgggcgaaggacatg 6319634 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 324 gccgtcgggttgaagttgtacggccccccgccgccgc 360 ||||||| |||| ||||||||||||| |||||||||| Sbjct: 6365897 gccgtcgcgttgtagttgtacggcccgccgccgccgc 6365861 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| ||||||||||||| Sbjct: 6342896 gtaggccgcctccgtgaggtggatgccgtcccagttg 6342860 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 245 ctccgtcaggtggacgccgtcccagttggcg 275 |||||||| |||||||||||||||| ||||| Sbjct: 26281099 ctccgtcatgtggacgccgtcccagctggcg 26281069 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 gttgaagttgtacggccccccgccgccgcagcac 365 |||||||||||||||||| || || ||||||||| Sbjct: 6734938 gttgaagttgtacggcccgccccctccgcagcac 6734971 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccagt 270 ||||||||| |||||| || ||||| || | ||||||||||||||||| Sbjct: 6724246 tcggcgatgtagtggtaagctgcctcggttaagtggacgccgtcccagt 6724294 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| |||||||||||| Sbjct: 6356920 gtaggccgcctccgtgaggtggatcccgtcccagttg 6356884 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 307544 aagcagaagcagaagcaggc 307525
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 291 bits (147), Expect = 9e-76 Identities = 186/199 (93%) Strand = Plus / Minus Query: 177 ggtcagagcagcctggggctggtgtaggggccgtggaggatgctgtcggcgatggcgtgg 236 |||||||||||||| ||||||||||| ||||| | ||||||||||| ||||||||||||| Sbjct: 92132 ggtcagagcagccttgggctggtgtaagggccattgaggatgctgttggcgatggcgtgg 92073 Query: 237 taggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgcac 296 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 92072 tagccggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtccgtgcac 92013 Query: 297 acgctggacccccgcacgccgcagctggccgtcgggttgaagttgtacggccccccgccg 356 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||| Sbjct: 92012 acgctggagccccgcacgccgcagctcgccttcgggttgaagttgtacggccctccgccg 91953 Query: 357 ccgcagcacgtcttcagcg 375 |||||||||||| |||||| Sbjct: 91952 ccgcagcacgtcctcagcg 91934 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 233 gtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggc 292 |||||| || ||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct: 76278 gtggtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgcc 76219 Query: 293 gcacacg 299 ||||||| Sbjct: 76218 gcacacg 76212 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||||||||||||||||||||||||| Sbjct: 133451 gtaggccgcctccgtcaggtggacgccgtcccagttg 133415 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 324 gccgtcgggttgaagttgtacggccccccgccgccgcagcacg 366 ||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 133363 gccgtcgcgttgtagttgtaccgccccccgccgccgcagcacg 133321 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 390 ccgaactgcttggggttcttggcgaaggacatg 422 ||||||||||||||||||| ||||||||||||| Sbjct: 90732 ccgaactgcttggggttctgggcgaaggacatg 90700 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 324 gccgtcgggttgaagttgtacggccccccgccgccgc 360 ||||||| |||| ||||||||||||| |||||||||| Sbjct: 136963 gccgtcgcgttgtagttgtacggcccgccgccgccgc 136927 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| ||||||||||||| Sbjct: 113962 gtaggccgcctccgtgaggtggatgccgtcccagttg 113926 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| |||||||||||| Sbjct: 127986 gtaggccgcctccgtgaggtggatcccgtcccagttg 127950
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1128 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 233 gtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggc 292 |||||| || ||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct: 1047 gtggtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgcc 988 Query: 293 gcacacg 299 ||||||| Sbjct: 987 gcacacg 981
>gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full insert mRNA sequence Length = 1472 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 235 ggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgc 294 ||||||||||||| |||| ||||| |||||||||| | ||||||||||||||| || || Sbjct: 1114 ggtaggcggcctcggtcatgtggatgccgtcccagctcacgtacgccgacgggttggagc 1055 Query: 295 acacgct 301 ||||||| Sbjct: 1054 acacgct 1048
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 233 gtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggc 292 |||||| || ||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct: 167410 gtggtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgcc 167351 Query: 293 gcacacg 299 ||||||| Sbjct: 167350 gcacacg 167344
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full insert sequence Length = 1622 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 233 gtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggc 292 |||||| || ||||| || ||||| |||||||||||||| ||||||||||||||||| | Sbjct: 1229 gtggtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacgccgacgggtcgcc 1170 Query: 293 gcacacg 299 ||||||| Sbjct: 1169 gcacacg 1163
>ref|NM_188455.1| Oryza sativa (japonica cultivar-group), Ozsa8150 predicted mRNA Length = 1149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||||||||||||||||||||||||| Sbjct: 1077 gtaggccgcctccgtcaggtggacgccgtcccagttg 1041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 324 gccgtcgggttgaagttgtacggccccccgccgccgcagcacg 366 ||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 989 gccgtcgcgttgtagttgtaccgccccccgccgccgcagcacg 947
>dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C19, full insert sequence Length = 1623 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 233 gtggtaggcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggc 292 |||||| || ||||| || ||||| |||||||||||||| ||||| ||||||||||| | Sbjct: 1230 gtggtacgccgcctcggtgaggtgcacgccgtcccagttcacgtacaccgacgggtcgcc 1171 Query: 293 gcacacg 299 ||||||| Sbjct: 1170 gcacacg 1164
>ref|XM_470389.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 1061 ggcctccgtcatgtggacgccgtcccagttgacgtac 1025
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 35200020 ggcctccgtcatgtggacgccgtcccagttgacgtac 35200056 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aaagcagaagcagaagcagg 171 |||||||||||||||||||| Sbjct: 14596666 aaagcagaagcagaagcagg 14596685
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 78781 ggcctccgtcatgtggacgccgtcccagttgacgtac 78817
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 35290092 ggcctccgtcatgtggacgccgtcccagttgacgtac 35290128 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aaagcagaagcagaagcagg 171 |||||||||||||||||||| Sbjct: 14591641 aaagcagaagcagaagcagg 14591660
>dbj|AK108050.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G04, full insert sequence Length = 1371 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 780 ggcctccgtcatgtggacgccgtcccagttgacgtac 816
>dbj|AK103825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147L02, full insert sequence Length = 586 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 353 ggcctccgtcatgtggacgccgtcccagttgacgtac 317
>dbj|AK059168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E06, full insert sequence Length = 1425 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 242 ggcctccgtcaggtggacgccgtcccagttggcgtac 278 ||||||||||| ||||||||||||||||||| ||||| Sbjct: 1061 ggcctccgtcatgtggacgccgtcccagttgacgtac 1025
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcacgtcttcagcg 375 |||| ||||||||||||| |||||||||||||||| | |||||| Sbjct: 933 gttgtagttgtacggcccaccgccgccgcagcacgccctcagcg 890
>ref|XM_476136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 1040 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 993
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 240 gcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgca 295 |||||||| || || |||| ||||||||||||| |||| |||||||||||| |||| Sbjct: 1067 gcggcctcggtgagatggatgccgtcccagttgacgtaggccgacgggtcgccgca 1012 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 gggttgaagttgtacggccccccgccgccgcagca 364 |||||| ||||||||||||| || ||||||||||| Sbjct: 977 gggttgtagttgtacggcccgcccccgccgcagca 943
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 240 gcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgca 295 |||||||| || || |||| ||||||||||||| |||| |||||||||||| |||| Sbjct: 61851 gcggcctcggtgagatggatgccgtcccagttgacgtaggccgacgggtcgccgca 61796 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcacgtcttcagcg 375 |||| ||||||||||||| |||||||||||||||| | |||||| Sbjct: 46099 gttgtagttgtacggcccaccgccgccgcagcacgccctcagcg 46056 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 10443 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 10396 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 gggttgaagttgtacggccccccgccgccgcagca 364 |||||| ||||||||||||| || ||||||||||| Sbjct: 61761 gggttgtagttgtacggcccgcccccgccgcagca 61727
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcacgtcttcagcg 375 |||| ||||||||||||| |||||||||||||||| | |||||| Sbjct: 113000 gttgtagttgtacggcccaccgccgccgcagcacgccctcagcg 112957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 77344 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 77297
>gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative lipase mRNA, complete cds Length = 1413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 1102 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 1055
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 240 gcggcctccgtcaggtggacgccgtcccagttggcgtacgccgacgggtcggcgca 295 |||||||| || || |||| ||||||||||||| |||| |||||||||||| |||| Sbjct: 6757590 gcggcctcggtgagatggatgccgtcccagttgacgtaggccgacgggtcgccgca 6757535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcacgtcttcagcg 375 |||| ||||||||||||| |||||||||||||||| | |||||| Sbjct: 6741838 gttgtagttgtacggcccaccgccgccgcagcacgccctcagcg 6741795 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 6706182 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 6706135 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 337 agttgtacggccccccgccgccgcagca 364 ||||||||||||| |||||||||||||| Sbjct: 24821999 agttgtacggcccgccgccgccgcagca 24822026 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 gggttgaagttgtacggccccccgccgccgcagca 364 |||||| ||||||||||||| || ||||||||||| Sbjct: 6757500 gggttgtagttgtacggcccgcccccgccgcagca 6757466
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full insert sequence Length = 1551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcacgtcttcagcg 375 |||| ||||||||||||| |||||||||||||||| | |||||| Sbjct: 1023 gttgtagttgtacggcccaccgccgccgcagcacgccctcagcg 980
>dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I03, full insert sequence Length = 1410 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 1106 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 1059
>dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B05, full insert sequence Length = 1422 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||| | ||||||||||||| || ||||||| |||||||||| Sbjct: 1117 tcggcgatggagcggtaggcggcctcggtaaggtggatgccgtcccag 1070
>gb|AY104591.1| Zea mays PCO098873 mRNA sequence Length = 1094 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcacg 366 |||| ||||||||||||| |||||||||||||||| Sbjct: 1085 gttgtagttgtacggcccgccgccgccgcagcacg 1051
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence Length = 847 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccag 269 ||||||||||||||| ||||||| |||||||||| Sbjct: 330 gtaggcggcctccgtgaggtggatgccgtcccag 297
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA Length = 1137 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 324 gccgtcgggttgaagttgtacggccccccgccgccgc 360 ||||||| |||| ||||||||||||| |||||||||| Sbjct: 977 gccgtcgcgttgtagttgtacggcccgccgccgccgc 941
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA Length = 1194 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| ||||||||||||| Sbjct: 1071 gtaggccgcctccgtgaggtggatgccgtcccagttg 1035
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full insert sequence Length = 1526 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| ||||||||||||| Sbjct: 1141 gtaggccgcctccgtgaggtggatgccgtcccagttg 1105
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full insert sequence Length = 1531 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| ||||||||||||| Sbjct: 1141 gtaggccgcctccgtgaggtggatgccgtcccagttg 1105
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 337 agttgtacggccccccgccgccgcagca 364 ||||||||||||| |||||||||||||| Sbjct: 103982 agttgtacggcccgccgccgccgcagca 104009
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 337 agttgtacggccccccgccgccgcagca 364 ||||||||||||| |||||||||||||| Sbjct: 8884 agttgtacggcccgccgccgccgcagca 8911
>ref|NM_192370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 245 ctccgtcaggtggacgccgtcccagttggcg 275 |||||||| |||||||||||||||| ||||| Sbjct: 1074 ctccgtcatgtggacgccgtcccagctggcg 1044
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 291 gcgcacacgctggacccccgcac 313 ||||||||||||||||||||||| Sbjct: 29410 gcgcacacgctggacccccgcac 29432
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 46.1 bits (23), Expect = 0.092 Identities = 29/31 (93%) Strand = Plus / Minus Query: 245 ctccgtcaggtggacgccgtcccagttggcg 275 |||||||| |||||||||||||||| ||||| Sbjct: 93780 ctccgtcatgtggacgccgtcccagctggcg 93750
>gb|AY104407.1| Zea mays PCO114073 mRNA sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Minus Query: 235 ggtaggcggcctccgtcaggtggacgccgtcccag 269 ||||||| |||||||||||||| | |||||||||| Sbjct: 1323 ggtaggcagcctccgtcaggtgaatgccgtcccag 1289
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence Length = 1460 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 243 gcctccgtcaggtggacgccgtcccag 269 |||||||||||||||| |||||||||| Sbjct: 1092 gcctccgtcaggtggatgccgtcccag 1066
>ref|NM_188523.1| Oryza sativa (japonica cultivar-group), Ozsa8192 predicted mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 gttgaagttgtacggccccccgccgccgcagcac 365 |||||||||||||||||| || || ||||||||| Sbjct: 135 gttgaagttgtacggcccgccccctccgcagcac 102
>ref|XM_466608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cgtcaggtggacgccgtcccag 269 |||||||||||||||||||||| Sbjct: 1128 cgtcaggtggacgccgtcccag 1107
>gb|AC130209.3| Mus musculus BAC clone RP24-369J19 from chromosome 6, complete sequence Length = 154867 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 agaaaagcagaagcagaagcag 170 |||||||||||||||||||||| Sbjct: 8732 agaaaagcagaagcagaagcag 8711
>gb|AC117971.7| Rattus norvegicus 7 BAC CH230-393L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 80793 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 149 agaaaagcagaagcagaagcag 170 |||||||||||||||||||||| Sbjct: 65161 agaaaagcagaagcagaagcag 65182
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA sequence Length = 1634 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||||| || ||||||| |||||||||| Sbjct: 1187 gtaggcggcctcggtgaggtggatgccgtcccag 1154
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA sequence Length = 1334 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccag 269 |||||| |||||||||||||||| ||||||||| Sbjct: 1064 gtaggccgcctccgtcaggtggatcccgtcccag 1031
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 cgtcaggtggacgccgtcccag 269 |||||||||||||||||||||| Sbjct: 23682105 cgtcaggtggacgccgtcccag 23682126
>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence Length = 137457 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 149 agaaaagcagaagcagaagcag 170 |||||||||||||||||||||| Sbjct: 77512 agaaaagcagaagcagaagcag 77533
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 gttgaagttgtacggccccccgccgccgcagcac 365 |||||||||||||||||| || || ||||||||| Sbjct: 87090 gttgaagttgtacggcccgccccctccgcagcac 87123 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccagt 270 ||||||||| |||||| || ||||| || | ||||||||||||||||| Sbjct: 76398 tcggcgatgtagtggtaagctgcctcggttaagtggacgccgtcccagt 76446
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 332 gttgaagttgtacggccccccgccgccgcagcac 365 |||||||||||||||||| || || ||||||||| Sbjct: 16999 gttgaagttgtacggcccgccccctccgcagcac 17032 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccagt 270 ||||||||| |||||| || ||||| || | ||||||||||||||||| Sbjct: 6307 tcggcgatgtagtggtaagctgcctcggttaagtggacgccgtcccagt 6355
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 248 cgtcaggtggacgccgtcccag 269 |||||||||||||||||||||| Sbjct: 123205 cgtcaggtggacgccgtcccag 123226
>gb|AC158407.1| Mus musculus BAC RP23-23E11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187033 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 agaaaagcagaagcagaagcag 170 |||||||||||||||||||||| Sbjct: 90456 agaaaagcagaagcagaagcag 90435
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccag 269 |||||||||||| || ||||||| |||||||||| Sbjct: 1138 gtaggcggcctcggtgaggtggatgccgtcccag 1105
>ref|NM_188520.1| Oryza sativa (japonica cultivar-group), Ozsa8189 predicted mRNA Length = 1140 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccagt 270 ||||||||| |||||| || ||||| || | ||||||||||||||||| Sbjct: 1094 tcggcgatgtagtggtaagctgcctcggttaagtggacgccgtcccagt 1046
>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA Length = 1137 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| |||||||||||| Sbjct: 1059 gtaggccgcctccgtgaggtggatcccgtcccagttg 1023
>ref|XM_479304.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1283 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 gttgtacggccccccgccgccgcagcacg 366 |||||||||||| |||||| ||||||||| Sbjct: 1036 gttgtacggcccgccgccggcgcagcacg 1008
>emb|AL022098.1|HS510L9 Human DNA sequence from clone RP3-510L9 on chromosome 6p24.1-25.3 Contains part of the NEDD9 gene for neural precursor cell expressed (developmentally down-regulated) 9, complete sequence Length = 130753 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 141 agaacactagaaaagcagaag 161 ||||||||||||||||||||| Sbjct: 50803 agaacactagaaaagcagaag 50783
>gb|AC078783.19| Homo sapiens 3 BAC RP11-320C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 33768 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggtggacgccgtcccagttgg 273 ||||||||||||||||||||| Sbjct: 18422 ggtggacgccgtcccagttgg 18442
>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence Length = 123626 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcagg 171 ||||||||||||||||||||| Sbjct: 110989 aaaagcagaagcagaagcagg 111009
>tpg|BK003401.1| TPA: TPA_inf: Drosophila melanogaster HDC02252 (HDC02252) gene, complete cds Length = 2759 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gaaaagcagaagcagaagcag 170 ||||||||||||||||||||| Sbjct: 91 gaaaagcagaagcagaagcag 111
>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR11M13, complete sequence Length = 190301 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gaaaagcagaagcagaagcag 170 ||||||||||||||||||||| Sbjct: 97873 gaaaagcagaagcagaagcag 97893
>gb|AC008332.11|AC008332 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR48D10, complete sequence Length = 153250 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gaaaagcagaagcagaagcag 170 ||||||||||||||||||||| Sbjct: 38061 gaaaagcagaagcagaagcag 38081
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 338 gttgtacggccccccgccgccgcagcacg 366 |||||||||||| |||||| ||||||||| Sbjct: 26674305 gttgtacggcccgccgccggcgcagcacg 26674333
>gb|L05390.1|STMHYDROXY Streptomyces halstedii hydroxylase (ORFC) gene, 5' end cds; ORFA, complete cds; ORFB, complete cds; ketoacyl synthase (ORF1 and ORF2) genes, complete cds's; acyl carrier protein (ORF3) gene, complete cds; cyclase (ORF4) gene, 5' end cds Length = 5224 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcg 242 ||||||||||||||||||||| Sbjct: 2595 tcggcgatggcgtggtaggcg 2575
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 338 gttgtacggccccccgccgccgcagcacg 366 |||||||||||| |||||| ||||||||| Sbjct: 21162 gttgtacggcccgccgccggcgcagcacg 21190
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 338 gttgtacggccccccgccgccgcagcacg 366 |||||||||||| |||||| ||||||||| Sbjct: 91909 gttgtacggcccgccgccggcgcagcacg 91937
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full insert sequence Length = 1723 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 236 gtaggcggcctccgtcaggtggacgccgtcccagttg 272 |||||| |||||||| ||||||| |||||||||||| Sbjct: 1288 gtaggccgcctccgtgaggtggatcccgtcccagttg 1252
>dbj|AK067352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101L22, full insert sequence Length = 1408 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Minus Query: 222 tcggcgatggcgtggtaggcggcctccgtcaggtggacgccgtcccagt 270 ||||||||| |||||| || ||||| || | ||||||||||||||||| Sbjct: 1107 tcggcgatgtagtggtaagctgcctcggttaagtggacgccgtcccagt 1059
>dbj|AK058442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G02, full insert sequence Length = 1283 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 gttgtacggccccccgccgccgcagcacg 366 |||||||||||| |||||| ||||||||| Sbjct: 1036 gttgtacggcccgccgccggcgcagcacg 1008
>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete sequence Length = 254309 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gaaaagcagaagcagaagcag 170 ||||||||||||||||||||| Sbjct: 41309 gaaaagcagaagcagaagcag 41329
>gb|AC125070.4| Mus musculus BAC clone RP23-443A7 from 13, complete sequence Length = 208344 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 cagaagcagaagcaggctggg 176 ||||||||||||||||||||| Sbjct: 34776 cagaagcagaagcaggctggg 34796
>ref|XM_549841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 836 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 224 aagcagaagcagaagcaggc 243
>gb|AC163703.4| Mus musculus BAC clone RP23-359B23 from chromosome 8, complete sequence Length = 219082 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 83868 aagcagaagcagaagcaggc 83887
>ref|NM_196312.1| Oryza sativa (japonica cultivar-group) putative lipase (OSJNBa0011L09.30), mRNA Length = 1197 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 338 gttgtacggccccc--cgccgccgcagcacg 366 |||||||||||||| ||||||||||||||| Sbjct: 1017 gttgtacggcccccgccgccgccgcagcacg 987
>ref|XM_470696.1| Oryza sativa (japonica cultivar-group), mRNA Length = 438 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aaagcagaagcagaagcagg 171 |||||||||||||||||||| Sbjct: 378 aaagcagaagcagaagcagg 397
>ref|NM_021350.1| Mus musculus choroideremia-like (Chml), mRNA Length = 1866 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 1595 aagcagaagcagaagcaggc 1614
>gb|AC009256.9| Drosophila melanogaster clone BACR03G18, complete sequence Length = 179931 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 57873 aagcagaagcagaagcaggc 57892
>gb|AC131320.8| Mus musculus chromosome 12, clone RP23-398E18, complete sequence Length = 210230 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 92649 aaaagcagaagcagaagcag 92630
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 agaagcagaagcaggctggg 176 |||||||||||||||||||| Sbjct: 77484 agaagcagaagcaggctggg 77465
>gb|AC129013.3| Mus musculus BAC clone RP24-550P17 from chromosome 6, complete sequence Length = 169094 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 67004 aagcagaagcagaagcaggc 67023
>emb|CR848674.8| Zebrafish DNA sequence from clone DKEY-73G17 in linkage group 16, complete sequence Length = 149652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcaggctg 174 |||| ||||||||||||||||||| Sbjct: 65330 aaaaacagaagcagaagcaggctg 65353
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 142246 tggcgtggcaggcggcctccgtca 142269
>ref|XM_746355.1| Aspergillus fumigatus Af293 multidrug resistant protein (Afu4g13830) partial mRNA Length = 1527 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 48 aaaagcagaagcagaagcag 67
>gb|AC142110.4| Mus musculus BAC clone RP24-104I11 from chromosome 7, complete sequence Length = 177085 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 agcagaagcagaagcaggct 173 |||||||||||||||||||| Sbjct: 83260 agcagaagcagaagcaggct 83241
>gb|AC124366.4| Mus musculus BAC clone RP24-541E9 from chromosome 1, complete sequence Length = 166555 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 128779 aagcagaagcagaagcaggc 128760
>gb|AC121967.3| Mus musculus BAC clone RP24-268P11 from chromosome 19, complete sequence Length = 185775 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 31326 aagcagaagcagaagcaggc 31345
>ref|XM_814455.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053507957.200) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 432 aaaagcagaagcagaagcag 451 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 228 aaaagcagaagcagaagcag 247
>ref|XM_814922.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053504239.220) partial mRNA Length = 1524 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 432 aaaagcagaagcagaagcag 451 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 228 aaaagcagaagcagaagcag 247
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 202305 aagcagaagcagaagcaggc 202286
>gb|AC160032.7| Mus musculus 6 BAC RP24-179I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200439 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 49026 aagcagaagcagaagcaggc 49007
>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete sequence Length = 198498 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 73471 aaaagcagaagcagaagcag 73490
>emb|AL136967.5| Human DNA sequence from clone RP1-149M18 on chromosome 6 Contains the NCR2 gene for natural cytotoxicity triggering receptor 2 and four CpG islands, complete sequence Length = 115295 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 152 aaagcagaagcagaagcaggctgggggt 179 |||||||||||||||| ||| ||||||| Sbjct: 93369 aaagcagaagcagaaggaggttgggggt 93396
>gb|BT009594.1| Triticum aestivum clone wre1n.pk0066.e4:fis, full insert mRNA sequence Length = 1260 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 agcagaagcagaagcaggct 173 |||||||||||||||||||| Sbjct: 599 agcagaagcagaagcaggct 618
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aaagcagaagcagaagcagg 171 |||||||||||||||||||| Sbjct: 61045 aaagcagaagcagaagcagg 61026
>ref|NM_001031531.1| Gallus gallus similar to RIKEN cDNA 5530600A18 (LOC428678), mRNA Length = 2988 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 taacaggcagtacatcactt 48 |||||||||||||||||||| Sbjct: 1573 taacaggcagtacatcactt 1554
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cttgcttaacaagcaagaac 145 |||||||||||||||||||| Sbjct: 220026 cttgcttaacaagcaagaac 220007
>emb|AJ720204.1| Gallus gallus mRNA for hypothetical protein, clone 12j7 Length = 2988 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 taacaggcagtacatcactt 48 |||||||||||||||||||| Sbjct: 1573 taacaggcagtacatcactt 1554
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 338 gttgtacggccccc--cgccgccgcagcacg 366 |||||||||||||| ||||||||||||||| Sbjct: 148965 gttgtacggcccccgccgccgccgcagcacg 148935
>emb|AJ626498.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993626 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626497.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993621 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626496.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993615 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626495.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993608 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626494.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993606 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626493.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993594 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626492.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993576 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626491.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993565 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626490.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993515 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626489.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 993412 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626488.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 983501 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626487.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 982466 Length = 1646 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 998 tggcgtggcaggcggcctccgtca 1021
>emb|AJ626486.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 981264 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626485.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 97869 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626484.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 94783 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626483.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90602 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626482.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90579 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626481.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90444 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626480.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90395 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626479.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90238 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626478.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90147 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626477.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 90132 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626476.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 7682 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626475.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 3355 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626474.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 1666 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626473.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 274 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626472.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate 25 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626471.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate E4 Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>emb|AJ626470.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate KOS321 Length = 1652 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1004 tggcgtggcaggcggcctccgtca 1027
>emb|AJ626469.1| Human herpesvirus 1 partial US8 gene for glycoprotein E, isolate F Length = 1658 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 1010 tggcgtggcaggcggcctccgtca 1033
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 338 gttgtacggccccc--cgccgccgcagcacg 366 |||||||||||||| ||||||||||||||| Sbjct: 134684 gttgtacggcccccgccgccgccgcagcacg 134714
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 1132147 aaaagcagaagcagaagcag 1132166
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 338 gttgtacggccccc--cgccgccgcagcacg 366 |||||||||||||| ||||||||||||||| Sbjct: 12628878 gttgtacggcccccgccgccgccgcagcacg 12628848
>gb|AY780645.1| Lactobacillus reuteri CRL1098 cobalamin gene cluster, partial sequence Length = 43444 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 cactagaaaagcagaagcag 164 |||||||||||||||||||| Sbjct: 40393 cactagaaaagcagaagcag 40412
>gb|L00036.1|HS1US Human herpesvirus strain 17 complete short unique region with partial terminal and inverted repeats DNA, complete cds Length = 26245 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 9971 tggcgtggcaggcggcctccgtca 9948
>gb|AC022120.7| Homo sapiens chromosome 5 clone CTC-570I13, complete sequence Length = 169513 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 105341 aagcagaagcagaagcaggc 105322
>gb|AF482427.1| Mus musculus encephalopsin (Opn3) and choroideremia-like protein (Chml) genes; and kynurenine 3-monooxygenase (Kmo) gene, partial cds Length = 34186 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 5845 aagcagaagcagaagcaggc 5864
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 59382 aagcagaagcagaagcaggc 59363
>emb|BX248985.6| Zebrafish DNA sequence from clone CH211-192N18 in linkage group 12, complete sequence Length = 167140 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 105508 aaaagcagaagcagaagcag 105527
>emb|X02138.1|HEHSV1SU Herpes simplex virus type 1 (HSV1) short unique region DNA Length = 12979 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 tggcgtggtaggcggcctccgtca 252 |||||||| ||||||||||||||| Sbjct: 9642 tggcgtggcaggcggcctccgtca 9665
>dbj|AK110763.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-H11, full insert sequence Length = 1462 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 338 gttgtacggccccc--cgccgccgcagcacg 366 |||||||||||||| ||||||||||||||| Sbjct: 1013 gttgtacggcccccgccgccgccgcagcacg 983
>gb|AY940051.1| Mus musculus clone BAC UH-K8 genomic sequence Length = 6077 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 4844 aagcagaagcagaagcaggc 4863
>ref|NM_211930.1| Eremothecium gossypii AGR202Wp (AGR202W), mRNA Length = 6819 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 38 aaaagcagaagcagaagcag 57
>dbj|AK066672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071F21, full insert sequence Length = 837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 224 aagcagaagcagaagcaggc 243
>gb|AF189156.1|AF189156 Mus musculus rab escort protein-2 (Chml) gene, complete cds Length = 3141 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 2363 aagcagaagcagaagcaggc 2382
>gb|AY109674.1| Zea mays CL12175_1 mRNA sequence Length = 765 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 526 aagcagaagcagaagcaggc 507
>gb|AE003501.4| Drosophila melanogaster chromosome X, section 53 of 74 of the complete sequence Length = 323840 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 92947 aagcagaagcagaagcaggc 92966
>emb|CT025557.11| Mouse DNA sequence from clone RP23-356F21 on chromosome 13, complete sequence Length = 186496 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 116863 aagcagaagcagaagcaggc 116882
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 4910036 aaaagcagaagcagaagcag 4910055
>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence Length = 195034 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcagaagcagaagcaggc 172 |||||||||||||||||||| Sbjct: 1762 aagcagaagcagaagcaggc 1743
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 gccccccgccgccgcagcac 365 |||||||||||||||||||| Sbjct: 1602241 gccccccgccgccgcagcac 1602260
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 338 gttgtacggccccc--cgccgccgcagcacg 366 |||||||||||||| ||||||||||||||| Sbjct: 12636218 gttgtacggcccccgccgccgccgcagcacg 12636188
>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome Length = 1173390 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 aaagcagaagcagaagcagg 171 |||||||||||||||||||| Sbjct: 626405 aaagcagaagcagaagcagg 626424
>dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29P11, TM0193, complete sequence Length = 102354 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 98335 aaaagcagaagcagaagcag 98354
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 182261 aaaagcagaagcagaagcag 182242
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aaaagcagaagcagaagcag 170 |||||||||||||||||||| Sbjct: 10301 aaaagcagaagcagaagcag 10282
>emb|AL929246.7| Mouse DNA sequence from clone RP23-34J8 on chromosome 2, complete sequence Length = 142905 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 aaagcagaagcagaagcagg 171 |||||||||||||||||||| Sbjct: 8809 aaagcagaagcagaagcagg 8790
>emb|AL772249.6| Mouse DNA sequence from clone RP23-430H1 on chromosome 2, complete sequence Length = 204907 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ggggtcagagcagcctgggg 194 |||||||||||||||||||| Sbjct: 13480 ggggtcagagcagcctgggg 13461
>gb|L20860.1|HUMGLYIBBE Human glycoprotein Ib beta mRNA, complete cds Length = 2793 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 tgtaggggccgtggaggatgctgt 222 |||||||||||||||||| ||||| Sbjct: 2637 tgtaggggccgtggaggacgctgt 2660 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,010,576 Number of Sequences: 3902068 Number of extensions: 3010576 Number of successful extensions: 83879 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 82965 Number of HSP's gapped (non-prelim): 926 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)