ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95c10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 436 bits (220), Expect = e-119 Identities = 283/304 (93%) Strand = Plus / Minus Query: 158 tagttgcaggactcccgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccgg 217 ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 4524402 tagttgcaggactccttggcgaagccgacgcgggagttggcgacgtcgaagacgacccgg 4524343 Query: 218 aggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcc 277 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4524342 atgttctgctgctgcaggttggcgatgacgttgacgacggagttgacgttctgcggcgcc 4524283 Query: 278 tcggccatggccaggcacgccagcggcgtcgcgctgctgtggatcagcgtgttctccatg 337 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 4524282 tcggccatggcgaggcaggccagcggcgtggcgctgctgtggatgagcgtgttctccatc 4524223 Query: 338 ggcagcgccaggtcgacgccgccgtccatgtggatcgtcacggccggcgcgcccccggcc 397 |||||||||||||| ||||||||||||||||| | |||||| || || || || ||||| Sbjct: 4524222 ggcagcgccaggtccacgccgccgtccatgtgcaccgtcaccgcgggggctccgccggcg 4524163 Query: 398 gccacctcgtccgtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 457 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4524162 gccacctcgtcggtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 4524103 Query: 458 gccg 461 |||| Sbjct: 4524102 gccg 4524099 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 35454003 catacgtacgtacgtacgtac 35453983 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 10078642 catacgtacgtacgtacgtac 10078622 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 35453979 atacgtacgtacgtacgtac 35453998 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 19330726 tacgtacgtacgtacgtaca 19330745
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 436 bits (220), Expect = e-119 Identities = 283/304 (93%) Strand = Plus / Minus Query: 158 tagttgcaggactcccgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccgg 217 ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 4524517 tagttgcaggactccttggcgaagccgacgcgggagttggcgacgtcgaagacgacccgg 4524458 Query: 218 aggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcc 277 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4524457 atgttctgctgctgcaggttggcgatgacgttgacgacggagttgacgttctgcggcgcc 4524398 Query: 278 tcggccatggccaggcacgccagcggcgtcgcgctgctgtggatcagcgtgttctccatg 337 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 4524397 tcggccatggcgaggcaggccagcggcgtggcgctgctgtggatgagcgtgttctccatc 4524338 Query: 338 ggcagcgccaggtcgacgccgccgtccatgtggatcgtcacggccggcgcgcccccggcc 397 |||||||||||||| ||||||||||||||||| | |||||| || || || || ||||| Sbjct: 4524337 ggcagcgccaggtccacgccgccgtccatgtgcaccgtcaccgcgggggctccgccggcg 4524278 Query: 398 gccacctcgtccgtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 457 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4524277 gccacctcgtcggtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 4524218 Query: 458 gccg 461 |||| Sbjct: 4524217 gccg 4524214 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 35544075 catacgtacgtacgtacgtac 35544055 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 10076763 catacgtacgtacgtacgtac 10076743 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 35544051 atacgtacgtacgtacgtac 35544070 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 19324767 tacgtacgtacgtacgtaca 19324786
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 436 bits (220), Expect = e-119 Identities = 283/304 (93%) Strand = Plus / Minus Query: 158 tagttgcaggactcccgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccgg 217 ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 129694 tagttgcaggactccttggcgaagccgacgcgggagttggcgacgtcgaagacgacccgg 129635 Query: 218 aggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcc 277 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 129634 atgttctgctgctgcaggttggcgatgacgttgacgacggagttgacgttctgcggcgcc 129575 Query: 278 tcggccatggccaggcacgccagcggcgtcgcgctgctgtggatcagcgtgttctccatg 337 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 129574 tcggccatggcgaggcaggccagcggcgtggcgctgctgtggatgagcgtgttctccatc 129515 Query: 338 ggcagcgccaggtcgacgccgccgtccatgtggatcgtcacggccggcgcgcccccggcc 397 |||||||||||||| ||||||||||||||||| | |||||| || || || || ||||| Sbjct: 129514 ggcagcgccaggtccacgccgccgtccatgtgcaccgtcaccgcgggggctccgccggcg 129455 Query: 398 gccacctcgtccgtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 457 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129454 gccacctcgtcggtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 129395 Query: 458 gccg 461 |||| Sbjct: 129394 gccg 129391
>dbj|AB122090.1| Oryza sativa (japonica cultivar-group) Radc1 gene for Radc1, complete cds Length = 3000 Score = 436 bits (220), Expect = e-119 Identities = 283/304 (93%) Strand = Plus / Minus Query: 158 tagttgcaggactcccgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccgg 217 ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 2574 tagttgcaggactccttggcgaagccgacgcgggagttggcgacgtcgaagacgacccgg 2515 Query: 218 aggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcc 277 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2514 atgttctgctgctgcaggttggcgatgacgttgacgacggagttgacgttctgcggcgcc 2455 Query: 278 tcggccatggccaggcacgccagcggcgtcgcgctgctgtggatcagcgtgttctccatg 337 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 2454 tcggccatggcgaggcaggccagcggcgtggcgctgctgtggatgagcgtgttctccatc 2395 Query: 338 ggcagcgccaggtcgacgccgccgtccatgtggatcgtcacggccggcgcgcccccggcc 397 |||||||||||||| ||||||||||||||||| | |||||| || || || || ||||| Sbjct: 2394 ggcagcgccaggtccacgccgccgtccatgtgcaccgtcaccgcgggggctccgccggcg 2335 Query: 398 gccacctcgtccgtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 457 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 gccacctcgtcggtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 2275 Query: 458 gccg 461 |||| Sbjct: 2274 gccg 2271
>dbj|AK120050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A21, full insert sequence Length = 1693 Score = 436 bits (220), Expect = e-119 Identities = 283/304 (93%) Strand = Plus / Minus Query: 158 tagttgcaggactcccgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccgg 217 ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1369 tagttgcaggactccttggcgaagccgacgcgggagttggcgacgtcgaagacgacccgg 1310 Query: 218 aggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcc 277 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1309 atgttctgctgctgcaggttggcgatgacgttgacgacggagttgacgttctgcggcgcc 1250 Query: 278 tcggccatggccaggcacgccagcggcgtcgcgctgctgtggatcagcgtgttctccatg 337 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1249 tcggccatggcgaggcaggccagcggcgtggcgctgctgtggatgagcgtgttctccatc 1190 Query: 338 ggcagcgccaggtcgacgccgccgtccatgtggatcgtcacggccggcgcgcccccggcc 397 |||||||||||||| ||||||||||||||||| | |||||| || || || || ||||| Sbjct: 1189 ggcagcgccaggtccacgccgccgtccatgtgcaccgtcaccgcgggggctccgccggcg 1130 Query: 398 gccacctcgtccgtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 457 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 gccacctcgtcggtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 1070 Query: 458 gccg 461 |||| Sbjct: 1069 gccg 1066
>dbj|AK062232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D08, full insert sequence Length = 1742 Score = 436 bits (220), Expect = e-119 Identities = 283/304 (93%) Strand = Plus / Minus Query: 158 tagttgcaggactcccgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccgg 217 ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1380 tagttgcaggactccttggcgaagccgacgcgggagttggcgacgtcgaagacgacccgg 1321 Query: 218 aggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcc 277 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1320 atgttctgctgctgcaggttggcgatgacgttgacgacggagttgacgttctgcggcgcc 1261 Query: 278 tcggccatggccaggcacgccagcggcgtcgcgctgctgtggatcagcgtgttctccatg 337 ||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 1260 tcggccatggcgaggcaggccagcggcgtggcgctgctgtggatgagcgtgttctccatc 1201 Query: 338 ggcagcgccaggtcgacgccgccgtccatgtggatcgtcacggccggcgcgcccccggcc 397 |||||||||||||| ||||||||||||||||| | |||||| || || || || ||||| Sbjct: 1200 ggcagcgccaggtccacgccgccgtccatgtgcaccgtcaccgcgggggctccgccggcg 1141 Query: 398 gccacctcgtccgtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 457 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 gccacctcgtcggtgttgaagcacgtgtcgaacgcgcccagcgacgtgtacccgctcggc 1081 Query: 458 gccg 461 |||| Sbjct: 1080 gccg 1077
>ref|XM_479408.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1350 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 173 cgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccggaggttctgctgctgc 232 ||||||||||||||||| ||||| ||||| |||| ||| ||| |||||||||||||| Sbjct: 1328 cgggcgaagccgacgcggccgttgggcacgtcgaagaggacgcggtggttctgctgctgc 1269 Query: 233 aggttggcgacgacgttga 251 | | |||||| |||||||| Sbjct: 1268 atgctggcgatgacgttga 1250
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 173 cgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccggaggttctgctgctgc 232 ||||||||||||||||| ||||| ||||| |||| ||| ||| |||||||||||||| Sbjct: 27694097 cgggcgaagccgacgcggccgttgggcacgtcgaagaggacgcggtggttctgctgctgc 27694038 Query: 233 aggttggcgacgacgttga 251 | | |||||| |||||||| Sbjct: 27694037 atgctggcgatgacgttga 27694019 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 23495869 catacgtacgtacgtacgtaca 23495890
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 173 cgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccggaggttctgctgctgc 232 ||||||||||||||||| ||||| ||||| |||| ||| ||| |||||||||||||| Sbjct: 151090 cgggcgaagccgacgcggccgttgggcacgtcgaagaggacgcggtggttctgctgctgc 151031 Query: 233 aggttggcgacgacgttga 251 | | |||||| |||||||| Sbjct: 151030 atgctggcgatgacgttga 151012
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 173 cgggcgaagccgacgcgcgagttggcgacgtcaaagacgacccggaggttctgctgctgc 232 ||||||||||||||||| ||||| ||||| |||| ||| ||| |||||||||||||| Sbjct: 73199 cgggcgaagccgacgcggccgttgggcacgtcgaagaggacgcggtggttctgctgctgc 73140 Query: 233 aggttggcgacgacgttga 251 | | |||||| |||||||| Sbjct: 73139 atgctggcgatgacgttga 73121
>gb|AY109945.1| Zea mays CL16097_1 mRNA sequence Length = 1050 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 219 ggttctgctgctgcaggttggcgacgacgttgacgacggagttgacgttctgcggcgcct 278 ||||||||||||||| | |||||| |||||||| |||| ||||||| | |||||| Sbjct: 250 ggttctgctgctgcatgctggcgatgacgttgagtacggtgttgacgccgtcgggcgccg 309 Query: 279 cggccatggccaggca 294 |||||||||||||||| Sbjct: 310 cggccatggccaggca 325 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 410 gtgttgaagcacgtgtcgaacgcgcccagcga 441 ||||||||||||||||||||| | |||||||| Sbjct: 429 gtgttgaagcacgtgtcgaaccctcccagcga 460
>ref|NM_100847.2| Arabidopsis thaliana pepsin A AT1G09750 mRNA, complete cds Length = 1575 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 1240 cgcgctgctgtggataagcgtattctccatcggcagc 1204
>ref|NM_100848.3| Arabidopsis thaliana U2A'; protein binding AT1G09760 (U2A') mRNA, complete cds Length = 1541 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 1477 cgcgctgctgtggataagcgtattctccatcggcagc 1513
>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0096A19 map near 50283S, complete sequence Length = 139969 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgtac 83 ||||||||||||||||||||||||| Sbjct: 31654 caatcatacgtacgtacgtacgtac 31630
>gb|AF370291.1| Arabidopsis thaliana unknown protein (At1g09750) mRNA, partial cds Length = 1330 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 979 cgcgctgctgtggataagcgtattctccatcggcagc 943
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgtac 83 ||||||||||||||||||||||||| Sbjct: 13794095 caatcatacgtacgtacgtacgtac 13794071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 23722294 atacgtacgtacgtacgtaca 23722274 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aatcatacgtacgtacgtac 79 |||||||||||||||||||| Sbjct: 21224024 aatcatacgtacgtacgtac 21224043
>emb|BX815383.1|CNS0ABJT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 1224 cgcgctgctgtggataagcgtattctccatcggcagc 1188
>emb|BX815490.1|CNS0ABCW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1502 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 1224 cgcgctgctgtggataagcgtattctccatcggcagc 1188
>gb|AY088375.1| Arabidopsis thaliana clone 6295 mRNA, complete sequence Length = 1575 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 1240 cgcgctgctgtggataagcgtattctccatcggcagc 1204
>gb|BT002332.1| Arabidopsis thaliana clone C104927 unknown protein (At1g09750) mRNA, complete cds Length = 1381 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 1200 cgcgctgctgtggataagcgtattctccatcggcagc 1164
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgtac 83 ||||||||||||||||||||||||| Sbjct: 13876097 caatcatacgtacgtacgtacgtac 13876073 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 24032015 atacgtacgtacgtacgtaca 24031995 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aatcatacgtacgtacgtac 79 |||||||||||||||||||| Sbjct: 21534265 aatcatacgtacgtacgtac 21534284
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 307 cgcgctgctgtggatcagcgtgttctccatgggcagc 343 ||||||||||||||| ||||| |||||||| |||||| Sbjct: 45696 cgcgctgctgtggataagcgtattctccatcggcagc 45660
>ref|NM_120785.3| Arabidopsis thaliana pepsin A AT5G07030 mRNA, complete cds Length = 1863 Score = 46.1 bits (23), Expect = 0.10 Identities = 83/103 (80%) Strand = Plus / Minus Query: 194 ttggcgacgtcaaagacgacccggaggttctgctgctgcaggttggcgacgacgttgacg 253 |||| |||||| | || ||| ||| ||||||||||||||| | | |||| || |||||| Sbjct: 1586 ttggggacgtcgatgaggacacggtggttctgctgctgcatgcttgcgatcacattgacg 1527 Query: 254 acggagttgacgttctgcggcgcctcggccatggccaggcacg 296 || ||||| ||||| | |||||| | |||||||| ||||||| Sbjct: 1526 acagagtttacgttttccggcgctgcagccatggcgaggcacg 1484
>gb|AC113063.8| Mus musculus chromosome 15, clone RP23-261F24, complete sequence Length = 218490 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtacac 85 ||||||||||||||||||||||| Sbjct: 10037 catacgtacgtacgtacgtacac 10059
>gb|AC140451.3| Mus musculus BAC clone RP23-52L6 from chromosome 14, complete sequence Length = 224897 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtacac 85 ||||||||||||||||||||||| Sbjct: 104889 catacgtacgtacgtacgtacac 104911
>gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, complete sequence Length = 202612 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtacac 85 ||||||||||||||||||||||| Sbjct: 134768 catacgtacgtacgtacgtacac 134746
>emb|BX832422.1|CNS0A140 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1545 Score = 46.1 bits (23), Expect = 0.10 Identities = 83/103 (80%) Strand = Plus / Minus Query: 194 ttggcgacgtcaaagacgacccggaggttctgctgctgcaggttggcgacgacgttgacg 253 |||| |||||| | || ||| ||| ||||||||||||||| | | |||| || |||||| Sbjct: 1301 ttggggacgtcgatgaggacacggtggttctgctgctgcatgcttgcgatcacattgacg 1242 Query: 254 acggagttgacgttctgcggcgcctcggccatggccaggcacg 296 || ||||| ||||| | |||||| | |||||||| ||||||| Sbjct: 1241 acagagtttacgttttccggcgctgcagccatggcgaggcacg 1199
>gb|AY085521.1| Arabidopsis thaliana clone 15560 mRNA, complete sequence Length = 1580 Score = 46.1 bits (23), Expect = 0.10 Identities = 83/103 (80%) Strand = Plus / Minus Query: 194 ttggcgacgtcaaagacgacccggaggttctgctgctgcaggttggcgacgacgttgacg 253 |||| |||||| | || ||| ||| ||||||||||||||| | | |||| || |||||| Sbjct: 1314 ttggggacgtcgatgaggacacggtggttctgctgctgcatgcttgcgatcacattgacg 1255 Query: 254 acggagttgacgttctgcggcgcctcggccatggccaggcacg 296 || ||||| ||||| | |||||| | |||||||| ||||||| Sbjct: 1254 acagagtttacgttttccggcgctgcagccatggcgaggcacg 1212
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 46.1 bits (23), Expect = 0.10 Identities = 83/103 (80%) Strand = Plus / Plus Query: 194 ttggcgacgtcaaagacgacccggaggttctgctgctgcaggttggcgacgacgttgacg 253 |||| |||||| | || ||| ||| ||||||||||||||| | | |||| || |||||| Sbjct: 62613 ttggggacgtcgatgaggacacggtggttctgctgctgcatgcttgcgatcacattgacg 62672 Query: 254 acggagttgacgttctgcggcgcctcggccatggccaggcacg 296 || ||||| ||||| | |||||| | |||||||| ||||||| Sbjct: 62673 acagagtttacgttttccggcgctgcagccatggcgaggcacg 62715
>gb|AY895861.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 253933 dehydrin 1 (Dhn1) gene, partial cds Length = 1243 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtacac 85 ||||||||||||||||||||||| Sbjct: 286 catacgtacgtacgtacgtacac 264
>gb|AY895859.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 219796 dehydrin 1 (Dhn1) gene, partial cds Length = 1243 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtacac 85 ||||||||||||||||||||||| Sbjct: 286 catacgtacgtacgtacgtacac 264
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence Length = 204342 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtacac 85 ||||||||||||||||||||||| Sbjct: 15471 catacgtacgtacgtacgtacac 15449
>gb|AY021307.1| Oryza sativa microsatellite MRG3632 containing (TA)X23, genomic sequence Length = 246 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 216 catacgtacgtacgtacgtaca 195
>gb|AC107661.10| Mus musculus chromosome 10, clone RP23-174M1, complete sequence Length = 187233 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 80052 catacgtacgtacgtacgtaca 80073
>emb|X58895.1|UCHISTO U.caupo gene for H2A, H2B, H3, and H4 histones Length = 4942 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 3745 catacgtacgtacgtacgtaca 3766 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 3668 catacgtacgtacgtacgtaca 3689
>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland Research Institute) complete sequence Length = 212829 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtacaccca 88 ||||| |||||||||||||||||||| Sbjct: 152914 catacatacgtacgtacgtacaccca 152889
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 ctgcggcgcctcggccatggcc 289 |||||||||||||||||||||| Sbjct: 2883456 ctgcggcgcctcggccatggcc 2883435
>emb|AL683829.15| Mouse DNA sequence from clone RP23-64F17 on chromosome 4 Contains two novel genes, the gene for a novel major urinary protein (Mup) family member, the Zfp37 gene for zinc finger protein 37, the Slc31a2 gene for solute carrier family 31 member 2 and two CpG islands, complete sequence Length = 223133 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 141557 catacgtacgtacgtacgtaca 141578
>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence Length = 247161 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 6967 catacgtacgtacgtacgtaca 6988
>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence Length = 214196 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 65451 catacgtacgtacgtacgtaca 65472
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 64405 catacgtacgtacgtacgtaca 64426
>emb|BX511149.9| Zebrafish DNA sequence from clone DKEYP-14G8 in linkage group 1, complete sequence Length = 98046 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 59173 catacgtacgtacgtacgtaca 59152
>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence Length = 188905 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 148397 catacgtacgtacgtacgtaca 148418
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtacacc 86 |||||||||||||||||||||| Sbjct: 18192483 tacgtacgtacgtacgtacacc 18192504 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 24838362 atacgtacgtacgtacgtac 24838343
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 24523559 catacgtacgtacgtacgtaca 24523538 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 gttgaagcacgtgtcgaacgcgcccagcg 440 |||| |||||||||||||| ||||||||| Sbjct: 42051803 gttgtagcacgtgtcgaacccgcccagcg 42051831
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 103943 catacgtacgtacgtacgtaca 103922
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 56262 catacgtacgtacgtacgtaca 56283
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 115766 catacgtacgtacgtacgtaca 115787
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtacacc 86 |||||||||||||||||||||| Sbjct: 115884 tacgtacgtacgtacgtacacc 115905
>dbj|AK107706.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-D04, full insert sequence Length = 667 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtacacc 86 |||||||||||||||||||||| Sbjct: 537 tacgtacgtacgtacgtacacc 558
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 291 ggcacgccagcggcgtcgcgctgctg 316 ||||||||||||||| |||||||||| Sbjct: 1948173 ggcacgccagcggcgacgcgctgctg 1948148 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 ctgctgcaggttggcgacgacgttg 250 |||||||||||||||||||| |||| Sbjct: 575357 ctgctgcaggttggcgacgatgttg 575381
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 222150 catacgtacgtacgtacgtaca 222129
>emb|AL929194.8| Mouse DNA sequence from clone RP23-385L14 on chromosome 2, complete sequence Length = 120827 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 113546 catacgtacgtacgtacgtaca 113567
>emb|AL831793.4| Mouse DNA sequence from clone RP23-9F23 on chromosome 4, complete sequence Length = 236470 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtaca 84 |||||||||||||||||||||| Sbjct: 154943 catacgtacgtacgtacgtaca 154964
>gb|AC166060.2| Mus musculus BAC clone RP23-185O8 from chromosome 9, complete sequence Length = 198365 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtacac 85 ||||||||||||||||||||| Sbjct: 101590 tacgtacgtacgtacgtacac 101570
>ref|XM_463752.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1338 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 gttgaagcacgtgtcgaacgcgcccagcg 440 |||| |||||||||||||| ||||||||| Sbjct: 1089 gttgtagcacgtgtcgaacccgcccagcg 1061
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 81910 catacgtacgtacgtacgtac 81930 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 81936 tacgtacgtacgtacgtaca 81955
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 3239 catacgtacgtacgtacgtac 3219
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 109789 catacgtacgtacgtacgtac 109809
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 56384 atacgtacgtacgtacgtaca 56364
>gb|AY135017.1| Zea mays PL transcription factor (pl) gene, pl-bol3c allele, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 939 catacgtacgtacgtacgtac 959
>gb|AY135016.1| Zea mays PL transcription factor (pl) gene, pl-bo3b allele, complete cds Length = 1771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 978 catacgtacgtacgtacgtac 998
>gb|AY135015.1| Zea mays PL transcription factor (pl) gene, pl-bo3a allele, exon 3 and partial cds Length = 774 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 33 catacgtacgtacgtacgtac 53
>gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, complete sequence Length = 194281 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 35357 catacgtacgtacgtacgtac 35337 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 35197 catacgtacgtacgtacgtac 35177 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 35351 tacgtacgtacgtacgtaca 35332 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 35163 tacgtacgtacgtacgtaca 35144
>emb|Z69707.1|HSCE95B9 Human DNA sequence from clone LL22NC01-95B9 on chromosome 22, complete sequence Length = 30829 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 1448 catacgtacgtacgtacgtac 1468 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 1462 tacgtacgtacgtacgtaca 1481
>emb|AL589949.15| Human DNA sequence from clone RP11-169F1 on chromosome 10 Contains a CpG island, complete sequence Length = 153802 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 72390 catacgtacgtacgtacgtac 72410 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 72396 tacgtacgtacgtacgtaca 72415
>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence Length = 235490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 76686 catacgtacgtacgtacgtac 76706 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 76526 catacgtacgtacgtacgtac 76546 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 76720 tacgtacgtacgtacgtaca 76739 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 76532 tacgtacgtacgtacgtaca 76551
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 24984 catacgtacgtacgtacgtac 25004
>emb|AL596447.16| Mouse DNA sequence from clone RP23-340N22 on chromosome 11 Contains the 5' end of the Tada2l gene for transcriptional adaptor 2 (ADA2 homolog, yeast)-like, a novel gene, the 5' end of the Acac gene for acetyl-Coenzyme A carboxylase and a CpG island, complete sequence Length = 114136 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 53451 catacgtacgtacgtacgtac 53471
>emb|CR388021.9| Zebrafish DNA sequence from clone CH211-189L17 in linkage group 5, complete sequence Length = 150805 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 54862 catacgtacgtacgtacgtac 54842 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 54852 tacgtacgtacgtacgtaca 54833
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gtacgtacgtacgtacaccca 88 ||||||||||||||||||||| Sbjct: 50379 gtacgtacgtacgtacaccca 50359
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gtacgtacgtacgtacaccca 88 ||||||||||||||||||||| Sbjct: 35854 gtacgtacgtacgtacaccca 35874
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 81907 catacgtacgtacgtacgtac 81887
>gb|DQ394071.1| Zea mays non-functional purple plant 1 transcription factor (PL1) gene, PL1(ems9703) allele, partial cds Length = 530 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 465 catacgtacgtacgtacgtac 485
>gb|L78814.1|MSGB1554CS Mycobacterium leprae cosmid B1554 DNA sequence Length = 36548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agcgccaggtcgacgccgccg 361 ||||||||||||||||||||| Sbjct: 4394 agcgccaggtcgacgccgccg 4414
>gb|L78813.1|MSGB1551CS Mycobacterium leprae cosmid B1551 DNA sequence Length = 36548 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 agcgccaggtcgacgccgccg 361 ||||||||||||||||||||| Sbjct: 4394 agcgccaggtcgacgccgccg 4414
>gb|DQ379501.1| Zea mays PL1 transcription factor (pl1) gene, pl1-Rhoades (gamma9601) allele, partial cds Length = 508 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 463 catacgtacgtacgtacgtac 483
>gb|DQ379500.1| Zea mays PL1 transcription factor (pl1) gene, pl1-Rhoades (mum9802) allele, partial cds Length = 529 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 468 catacgtacgtacgtacgtac 488
>gb|DQ379499.1| Zea mays PL1 transcription factor (pl1) gene, pl1-Rhoades (mum9515) allele, partial cds Length = 527 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 466 catacgtacgtacgtacgtac 486
>emb|AL929297.10| Zebrafish DNA sequence from clone DKEY-21K4 in linkage group 5, complete sequence Length = 104074 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 2180 catacgtacgtacgtacgtac 2200
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 24263 catacgtacgtacgtacgtac 24243
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 29115518 catacgtacgtacgtacgtac 29115538
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16521165 atacgtacgtacgtacgtaca 16521185 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16521021 atacgtacgtacgtacgtaca 16521041 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16517585 atacgtacgtacgtacgtaca 16517605 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16517441 atacgtacgtacgtacgtaca 16517461
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 13941163 catacgtacgtacgtacgtac 13941183 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 10161686 catacgtacgtacgtacgtac 10161666 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgta 82 ||||||||||||||||| |||||| Sbjct: 37992 caatcatacgtacgtacctacgta 37969
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtacac 85 ||||||||||||||||||||| Sbjct: 9990851 tacgtacgtacgtacgtacac 9990871 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 26393013 catacgtacgtacgtacgta 26392994 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 22228870 tacgtacgtacgtacgtaca 22228851
>gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome 13, complete sequence Length = 206997 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 156551 catacgtacgtacgtacgtac 156531 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 156526 catacgtacgtacgtacgtac 156546
>gb|AF315587.1|AF315587 Zea mays truncated PL protein (Pl) gene, pl-0 allele, complete cds Length = 1891 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 1140 catacgtacgtacgtacgtac 1160
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 412 gttgaagcacgtgtcgaacgcgcccagcg 440 |||| |||||||||||||| ||||||||| Sbjct: 38608 gttgtagcacgtgtcgaacccgcccagcg 38636
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 33623 catacgtacgtacgtacgtac 33643 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 33647 atacgtacgtacgtacgtac 33628
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 cggcgcgcccccggccgccacctcg 406 |||||||| |||||||||||||||| Sbjct: 4948693 cggcgcgcgcccggccgccacctcg 4948717
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtacac 85 ||||||||||||||||||||| Sbjct: 30753 tacgtacgtacgtacgtacac 30773
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtacac 85 ||||||||||||||||||||| Sbjct: 138098 tacgtacgtacgtacgtacac 138118
>dbj|AK110957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A08, full insert sequence Length = 1591 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 412 gttgaagcacgtgtcgaacgcgcccagcg 440 |||| |||||||||||||| ||||||||| Sbjct: 1141 gttgtagcacgtgtcgaacccgcccagcg 1113
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 52528 atacgtacgtacgtacgtaca 52548
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gtacgtacgtacgtacaccca 88 ||||||||||||||||||||| Sbjct: 25713 gtacgtacgtacgtacaccca 25733
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 13948505 catacgtacgtacgtacgtac 13948525 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 10167725 catacgtacgtacgtacgtac 10167705 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgta 82 ||||||||||||||||| |||||| Sbjct: 37990 caatcatacgtacgtacctacgta 37967
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16474398 atacgtacgtacgtacgtaca 16474418 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16474254 atacgtacgtacgtacgtaca 16474274 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16470818 atacgtacgtacgtacgtaca 16470838 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 16470674 atacgtacgtacgtacgtaca 16470694
>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete sequence Length = 178273 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 39276 catacgtacgtacgtacgtac 39296 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 39294 tacgtacgtacgtacgtaca 39313
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 56349 atacgtacgtacgtacgtaca 56329 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 56205 atacgtacgtacgtacgtaca 56185 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 52769 atacgtacgtacgtacgtaca 52749 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtaca 84 ||||||||||||||||||||| Sbjct: 52625 atacgtacgtacgtacgtaca 52605
>gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, complete sequence Length = 195911 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 151910 catacgtacgtacgtacgtac 151930 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 151934 atacgtacgtacgtacgtac 151915
>gb|L13454.1|MZEPLBH Zea mays Pl-Bh (Blotched1) gene, complete cds Length = 3587 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 1852 catacgtacgtacgtacgtac 1872
>gb|L19494.1|MZEPLTANSA Zea mays PL transcriptional activator gene, complete cds Length = 4439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 1256 catacgtacgtacgtacgtac 1276
>gb|L19496.1|MZETRACTB Zea mays transcriptional activator for anthocyanin synthesis gene, complete cds Length = 1893 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgtac 83 ||||||||||||||||||||| Sbjct: 1147 catacgtacgtacgtacgtac 1167
>gb|AC154052.1| Drosophila melanogaster clone BACR01B21, complete sequence Length = 167163 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 108170 tacgtacgtacgtacgtaca 108151
>ref|XM_466817.1| Oryza sativa (japonica cultivar-group), mRNA Length = 796 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 599 atacgtacgtacgtacgtac 580
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 gtggatcgtcacggccggcg 386 |||||||||||||||||||| Sbjct: 2371478 gtggatcgtcacggccggcg 2371459
>gb|AF488416.1| Zea mays chromosome 9 BAC 9C20 complete sequence Length = 143300 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 18981 acgtacgtacgtacgtacac 18962
>gb|AY024106.1| Oryza sativa microsatellite MRG6431 containing (GTAC)X8, genomic sequence Length = 232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 119 tacgtacgtacgtacgtaca 100
>gb|AY019125.1| Oryza sativa microsatellite MRG1450 containing (AT)X27, closest to marker G1149, genomic sequence Length = 254 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 12 catacgtacgtacgtacgta 31
>gb|AC079632.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0046L02, complete sequence Length = 142381 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgta 82 ||||||||||||||||| |||||| Sbjct: 23886 caatcatacgtacgtacctacgta 23863
>ref|XM_867919.1| PREDICTED: Bos taurus similar to XK-related protein 4 (LOC615974), mRNA Length = 876 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 gcgcccccggccgccacctcgtcc 409 ||||||||||||||| |||||||| Sbjct: 158 gcgcccccggccgcctcctcgtcc 135
>ref|XM_359723.1| Magnaporthe grisea 70-15 hypothetical protein (MG05054.4) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgaagccgacgcgcgagttg 196 |||||||||||||||||||| Sbjct: 484 cgaagccgacgcgcgagttg 465
>ref|XM_955234.1| Neurospora crassa OR74A hypothetical protein (NCU07062.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gacaaactttgatgccacat 20 |||||||||||||||||||| Sbjct: 657 gacaaactttgatgccacat 676
>ref|XM_327347.1| Neurospora crassa OR74A hypothetical protein (NCU07062.1) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gacaaactttgatgccacat 20 |||||||||||||||||||| Sbjct: 657 gacaaactttgatgccacat 676
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccgggcgaagccgacgcgcg 191 |||||||||||||||||||| Sbjct: 3161485 ccgggcgaagccgacgcgcg 3161504
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0060K21, complete sequence Length = 153973 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aatcatacgtacgtacgtac 79 |||||||||||||||||||| Sbjct: 106183 aatcatacgtacgtacgtac 106202
>gb|AC024028.10| Homo sapiens BAC clone RP11-151M24 from 7, complete sequence Length = 176278 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 gcacacactgaaaattaagc 48 |||||||||||||||||||| Sbjct: 70902 gcacacactgaaaattaagc 70883
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 165896 catacgtacgtacgtacgta 165877 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 165875 catacgtacgtacgtacgta 165894
>emb|AJ567199.1|GHI567199 Gossypium hirsutum microsatellite DNA mGhCIR254, clone CIR254 Length = 497 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 210 tacgtacgtacgtacgtaca 229
>emb|CR407582.7| Zebrafish DNA sequence from clone DKEY-224L8 in linkage group 7, complete sequence Length = 200693 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 32527 tacgtacgtacgtacgtaca 32508
>gb|AC124486.4| Mus musculus BAC clone RP23-451E1 from chromosome 12, complete sequence Length = 183140 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 139446 tacgtacgtacgtacgtaca 139465
>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete sequence Length = 193958 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 50925 tacgtacgtacgtacgtaca 50944
>gb|AC122305.4| Mus musculus BAC clone RP23-284E19 from 9, complete sequence Length = 192434 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 atcatacgtacgtacgtacgtaca 84 ||||||| |||||||||||||||| Sbjct: 127121 atcatacatacgtacgtacgtaca 127098
>emb|CR749176.14| Zebrafish DNA sequence from clone DKEY-43B13 in linkage group 19, complete sequence Length = 237649 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 182228 tacgtacgtacgtacgtaca 182209
>emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 in linkage group 9, complete sequence Length = 162252 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 150660 atacgtacgtacgtacgtac 150641 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 150655 tacgtacgtacgtacgtaca 150636
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gatcgtcacggccggcgcgc 389 |||||||||||||||||||| Sbjct: 793291 gatcgtcacggccggcgcgc 793310
>emb|AL022149.2|HS122K23 Human DNA sequence from clone RP1-122K23 on chromosome Xq21.21-22.1, complete sequence Length = 122777 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 gaaggaaagtcgtccggtgggaaa 151 |||||||||||||| ||||||||| Sbjct: 99108 gaaggaaagtcgtctggtgggaaa 99085
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgta 82 ||||||||||||||||| |||||| Sbjct: 37992 caatcatacgtacgtacctacgta 37969
>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete sequence Length = 182025 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 67428 acgtacgtacgtacgtacac 67409
>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4 Length = 61971 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tcatacgtacgtacgtacgt 81 |||||||||||||||||||| Sbjct: 29920 tcatacgtacgtacgtacgt 29901
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 277 ctcggccatggccaggcacgccagcggc 304 |||||||||||||||| |||||||||| Sbjct: 308195 ctcggccatggccagggccgccagcggc 308168
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccgggcgaagccgacgcgcg 191 |||||||||||||||||||| Sbjct: 1338858 ccgggcgaagccgacgcgcg 1338877
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 ccggcgcgcccccggccgcc 400 |||||||||||||||||||| Sbjct: 18761 ccggcgcgcccccggccgcc 18780
>emb|BX640548.14| Zebrafish DNA sequence from clone CH211-198E12 in linkage group 11, complete sequence Length = 231587 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 121452 tacgtacgtacgtacgtaca 121471
>emb|CR788251.13| Zebrafish DNA sequence from clone DKEY-231F24 in linkage group 13, complete sequence Length = 150523 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 109669 tacgtacgtacgtacgtaca 109688 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 109682 tacgtacgtacgtacgtaca 109663
>emb|BX901943.3| Zebrafish DNA sequence from clone CH211-269I23 in linkage group 1, complete sequence Length = 43165 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 12355 catacgtacgtacgtacgta 12374
>gb|AC166065.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1136E01, complete sequence Length = 105139 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 caatcatacgtacgtacgtacgta 82 ||||||||||||||||| |||||| Sbjct: 43131 caatcatacgtacgtacctacgta 43108
>gb|AC069458.2| Drosophila melanogaster 3L BAC RP98-23N10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169863 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 155743 tacgtacgtacgtacgtaca 155762
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 287 gccaggcacgccagcggcgtcgcgctgc 314 |||| ||| ||||||||||||||||||| Sbjct: 1577717 gccatgcaggccagcggcgtcgcgctgc 1577690
>gb|AE006029.1| Caulobacter crescentus CB15 section 355 of 359 of the complete genome Length = 10213 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cgcctcggccatggccaggc 293 |||||||||||||||||||| Sbjct: 8708 cgcctcggccatggccaggc 8727
>gb|AC146694.12| Pan troglodytes clone rp43-178l17, complete sequence Length = 229508 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 43628 atacgtacgtacgtacgtac 43609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 43623 tacgtacgtacgtacgtaca 43604
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 tctgctgctgcaggttggcg 241 |||||||||||||||||||| Sbjct: 840367 tctgctgctgcaggttggcg 840386
>ref|NM_165162.1| Drosophila melanogaster dachshund CG4952-RB, transcript variant B (dac), mRNA Length = 4970 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 93 acgtacgtacgtacgtacac 74
>ref|NM_165161.1| Drosophila melanogaster dachshund CG4952-RD, transcript variant D (dac), mRNA Length = 4949 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 93 acgtacgtacgtacgtacac 74
>ref|NM_165160.1| Drosophila melanogaster dachshund CG4952-RA, transcript variant A (dac), mRNA Length = 4943 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 93 acgtacgtacgtacgtacac 74
>ref|NM_165159.1| Drosophila melanogaster dachshund CG4952-RC, transcript variant C (dac), mRNA Length = 4922 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 93 acgtacgtacgtacgtacac 74
>gb|AC108883.1| Genomic sequence for (japonica cultivar-group) cultivar Nipponbare clone OJ1136E01, from chromosome 10, complete sequence Length = 113856 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 caatcatacgtacgtacgtacgta 82 ||||||||||||||||| |||||| Sbjct: 75865 caatcatacgtacgtacctacgta 75888
>ref|NM_001014487.1| Drosophila melanogaster dachshund CG4952-RF, transcript variant F (dac), mRNA Length = 4943 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 93 acgtacgtacgtacgtacac 74
>ref|NM_001014486.1| Drosophila melanogaster dachshund CG4952-RG, transcript variant G (dac), mRNA Length = 4916 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 93 acgtacgtacgtacgtacac 74
>dbj|AK148579.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120411A01 product:hypothetical protein, full insert sequence Length = 3142 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttgcacacactgaaaattaa 46 |||||||||||||||||||| Sbjct: 1425 ttgcacacactgaaaattaa 1406
>gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, complete sequence Length = 168297 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 61765 acgtacgtacgtacgtacac 61746
>gb|AC093177.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR33A07, complete sequence Length = 174726 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 34790 acgtacgtacgtacgtacac 34771
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccgggcgaagccgacgcgcg 191 |||||||||||||||||||| Sbjct: 1294094 ccgggcgaagccgacgcgcg 1294075
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 484791 tacgtacgtacgtacgtaca 484810
>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone BACR44N04, complete sequence Length = 190651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 28225 acgtacgtacgtacgtacac 28244
>gb|AC137925.2| Oryza sativa chromosome 3 BAC OSJNBb0047D08 genomic sequence, complete sequence Length = 140507 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 114887 tacgtacgtacgtacgtaca 114906
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 cagcgccaggtcgacgccgccgtc 363 ||||||| |||||||||||||||| Sbjct: 528950 cagcgccgggtcgacgccgccgtc 528973
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 30299 tacgtacgtacgtacgtaca 30318
>dbj|AP006847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa148N02 Length = 36400 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 3361 atacgtacgtacgtacgtac 3342
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 42565 catacgtacgtacgtacgta 42546
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 catacgtacgtacgtacgta 82 |||||||||||||||||||| Sbjct: 122594 catacgtacgtacgtacgta 122575
>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048G02 Length = 155542 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 45246 tacgtacgtacgtacgtaca 45227
>dbj|AK105122.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-C03, full insert sequence Length = 796 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 599 atacgtacgtacgtacgtac 580
>dbj|AK067011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093K20, full insert sequence Length = 1494 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 1384 tacgtacgtacgtacgtaca 1365
>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184984 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 70388 acgtacgtacgtacgtacac 70369
>emb|CR925820.5| Zebrafish DNA sequence from clone CH211-22E9 in linkage group 10, complete sequence Length = 173023 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 aacaatcatacgtacgtacgtacgtaca 84 |||| |||||||||||||||| |||||| Sbjct: 95760 aacattcatacgtacgtacgtgcgtaca 95733
>gb|AE003651.2| Drosophila melanogaster chromosome 2L, section 60 of 83 of the complete sequence Length = 254646 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 124602 acgtacgtacgtacgtacac 124621
>gb|AE003516.4| Drosophila melanogaster chromosome 3L, section 69 of 83 of the complete sequence Length = 305312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 289073 tacgtacgtacgtacgtaca 289092
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ttgcacacactgaaaattaa 46 |||||||||||||||||||| Sbjct: 158206 ttgcacacactgaaaattaa 158187
>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence Length = 158957 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 acgtacgtacgtacgtacac 85 |||||||||||||||||||| Sbjct: 18957 acgtacgtacgtacgtacac 18938
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 gcgccaggtcgacgccgccg 361 |||||||||||||||||||| Sbjct: 185901 gcgccaggtcgacgccgccg 185920
>gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, complete sequence Length = 178896 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 atcatacgtacgtacgtacgtaca 84 ||||||| |||||||||||||||| Sbjct: 169595 atcatacatacgtacgtacgtaca 169618
>gb|U44024.1|MMU44024 Mus musculus Flt3 ligand gene, complete cds Length = 4799 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 atacgtacgtacgtacgtac 83 |||||||||||||||||||| Sbjct: 2874 atacgtacgtacgtacgtac 2893
>emb|AL772145.9| Mouse DNA sequence from clone RP23-212H4 on chromosome 3, complete sequence Length = 228623 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tacgtacgtacgtacgtaca 84 |||||||||||||||||||| Sbjct: 57545 tacgtacgtacgtacgtaca 57564
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 cagcgccaggtcgacgccgccgtc 363 ||||||| |||||||||||||||| Sbjct: 35908 cagcgccgggtcgacgccgccgtc 35885 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,959,013 Number of Sequences: 3902068 Number of extensions: 2959013 Number of successful extensions: 80945 Number of sequences better than 10.0: 175 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76942 Number of HSP's gapped (non-prelim): 3705 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
