ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 961 0.0
2dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic D... 961 0.0
3ref|XM_477581.1| Oryza sativa (japonica cultivar-group), mRNA 291 1e-75
4gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 133 6e-28
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 133 6e-28
9emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa... 133 6e-28
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
11dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
13dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
14dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
15dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
16dbj|AP005390.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
17dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
18dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
19dbj|AP006750.2| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
20dbj|AK062975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
21emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 50 0.007
22dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
23dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
24dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
25dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.027
26gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
27gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
28emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 46 0.11
29gb|DQ023263.1| Macaca mulatta 17beta-hydroxysteroid dehydrogenas... 46 0.11
30emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BA... 46 0.11
31ref|XM_481901.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
32gb|AC166826.4| Mus musculus BAC clone RP23-370K22 from chromosom... 42 1.7
33gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome... 42 1.7
34gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosom... 42 1.7
35emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein beta-... 42 1.7
36gb|AC006570.6| Arabidopsis thaliana chromosome 2 clone T16I21 ma... 42 1.7
37gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019... 42 1.7
38gb|AC004155.1|AC004155 Mus musculus DNA from BAC 10818 containin... 42 1.7
39dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
40dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
41dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
42dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
43gb|AC159248.4| Mus musculus BAC clone RP24-254P11 from chromosom... 42 1.7
44gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, co... 42 1.7
45ref|XM_521130.1| PREDICTED: Pan troglodytes similar to SNF2/RAD5... 40 6.6
46gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, ... 40 6.6
47gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genom... 40 6.6
48gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
49ref|XM_757464.1| Ustilago maydis 521 hypothetical protein (UM064... 40 6.6
50emb|AL513188.13| Human DNA sequence from clone RP11-322M21 on ch... 40 6.6
51emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chr... 40 6.6
52emb|AL008583.1|HS327J16 Human DNA sequence from clone RP3-327J16... 40 6.6
53dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.6
54gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome... 40 6.6
55dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
58dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
59dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
60dbj|AP005753.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
61dbj|AK072986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
62emb|AL806512.9| Mouse DNA sequence from clone RP23-354A20 on chr... 40 6.6 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  961 bits (485), Expect = 0.0
 Identities = 487/488 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1        ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647681 ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 11647622

                                                                            
Query: 61       gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647621 gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 11647562

                                                                            
Query: 121      cagatacaatttccaattacatctggaatctacaaattccatttacagttctacaaaaca 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647561 cagatacaatttccaattacatctggaatctacaaattccatttacagttctacaaaaca 11647502

                                                                            
Query: 181      ttgctattacagttgggccaccatcctctctgccagcccaagtctattcttcctcccccg 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647501 ttgctattacagttgggccaccatcctctctgccagcccaagtctattcttcctcccccg 11647442

                                                                            
Query: 241      caggcccatcccttctgcagcctaaaagtctaattcacttccttttgcccagccggctgc 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647441 caggcccatcccttctgcagcctaaaagtctaattcacttccttttgcccagccggctgc 11647382

                                                                            
Query: 301      acatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgccgagccaggc 360
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647381 acatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgccgagccaggc 11647322

                                                                            
Query: 361      aggttgatgcgccgccccaacctgtcctgcaacgcaggcacgccgcgcaccgngtcaacc 420
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 11647321 aggttgatgcgccgccccaacctgtcctgcaacgcaggcacgccgcgcaccgcgtcaacc 11647262

                                                                            
Query: 421      tcgtcgccaccccatcctctcaccaagcagcaaggtcgctcgtttccctcctgcaccatg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11647261 tcgtcgccaccccatcctctcaccaagcagcaaggtcgctcgtttccctcctgcaccatg 11647202

                        
Query: 481      ctcccagt 488
                ||||||||
Sbjct: 11647201 ctcccagt 11647194



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1        ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatcc 57
                ||||||||||||||| |||||| |  |||||||||||||||||||| ||||||||||
Sbjct: 27181718 ataccccaattaaactgttcttatttagttccaaaccccaattccatatttcaatcc 27181662



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 184      ctattacagttgggccaccatcctctctgccagccc 219
                ||||||||||||||||||| | |||||| |||||||
Sbjct: 10584938 ctattacagttgggccacccttctctcttccagccc 10584973



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 308     caccacctgctcgacaaaatg 328
               |||||||||||||||||||||
Sbjct: 8951439 caccacctgctcgacaaaatg 8951419



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 308     caccacctgctcgacaaaatg 328
               |||||||||||||||||||||
Sbjct: 5395712 caccacctgctcgacaaaatg 5395692
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>dbj|AP006344.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0680C01
          Length = 145580

 Score =  961 bits (485), Expect = 0.0
 Identities = 487/488 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5840 ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 5781

                                                                        
Query: 61   gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5780 gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 5721

                                                                        
Query: 121  cagatacaatttccaattacatctggaatctacaaattccatttacagttctacaaaaca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5720 cagatacaatttccaattacatctggaatctacaaattccatttacagttctacaaaaca 5661

                                                                        
Query: 181  ttgctattacagttgggccaccatcctctctgccagcccaagtctattcttcctcccccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5660 ttgctattacagttgggccaccatcctctctgccagcccaagtctattcttcctcccccg 5601

                                                                        
Query: 241  caggcccatcccttctgcagcctaaaagtctaattcacttccttttgcccagccggctgc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5600 caggcccatcccttctgcagcctaaaagtctaattcacttccttttgcccagccggctgc 5541

                                                                        
Query: 301  acatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgccgagccaggc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5540 acatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgccgagccaggc 5481

                                                                        
Query: 361  aggttgatgcgccgccccaacctgtcctgcaacgcaggcacgccgcgcaccgngtcaacc 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5480 aggttgatgcgccgccccaacctgtcctgcaacgcaggcacgccgcgcaccgcgtcaacc 5421

                                                                        
Query: 421  tcgtcgccaccccatcctctcaccaagcagcaaggtcgctcgtttccctcctgcaccatg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5420 tcgtcgccaccccatcctctcaccaagcagcaaggtcgctcgtttccctcctgcaccatg 5361

                    
Query: 481  ctcccagt 488
            ||||||||
Sbjct: 5360 ctcccagt 5353
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>ref|XM_477581.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 306

 Score =  291 bits (147), Expect = 1e-75
 Identities = 149/150 (99%)
 Strand = Plus / Minus

                                                                       
Query: 339 ctagtggcatgccgagccaggcaggttgatgcgccgccccaacctgtcctgcaacgcagg 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctagtggcatgccgagccaggcaggttgatgcgccgccccaacctgtcctgcaacgcagg 247

                                                                       
Query: 399 cacgccgcgcaccgngtcaacctcgtcgccaccccatcctctcaccaagcagcaaggtcg 458
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cacgccgcgcaccgcgtcaacctcgtcgccaccccatcctctcaccaagcagcaaggtcg 187

                                         
Query: 459 ctcgtttccctcctgcaccatgctcccagt 488
           ||||||||||||||||||||||||||||||
Sbjct: 186 ctcgtttccctcctgcaccatgctcccagt 157
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>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09
              map near S6115, complete sequence
          Length = 215240

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                          
Query: 1      ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 60
              ||||||| ||||||  ||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct: 186728 atacccctattaaatggttctcgtacagttccaaaccccagttccaaatttcaatccaga 186787

                                                                          
Query: 61     gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 120
              |||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct: 186788 gccaaatcaaatgtccaattatacagtcccattacatatttgtagtctatttacaagtgt 186847

               
Query: 121    c 121
              |
Sbjct: 186848 c 186848



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 142    tctggaatctacaaattccat 162
              |||||||||||||||||||||
Sbjct: 186847 tctggaatctacaaattccat 186867
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1        ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 60
                ||||||| ||||||  ||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct: 12804052 atacccctattaaatggttctcgtacagttccaaaccccagttccaaatttcaatccaga 12804111

                                                                            
Query: 61       gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 120
                |||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct: 12804112 gccaaatcaaatgtccaattatacagtcccattacatatttgtagtctatttacaagtgt 12804171

                 
Query: 121      c 121
                |
Sbjct: 12804172 c 12804172



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 292      gccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgcc 351
                |||||| |||| ||| | ||||||||||||| ||||||| |||| ||| ||  |||||||
Sbjct: 22890835 gccggccgcacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcatgcc 22890776

                   
Query: 352      gag 354
                |||
Sbjct: 22890775 gag 22890773



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 142      tctggaatctacaaattccat 162
                |||||||||||||||||||||
Sbjct: 12804171 tctggaatctacaaattccat 12804191
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  161 bits (81), Expect = 3e-36
 Identities = 111/121 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1        ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccaga 60
                ||||||| ||||||  ||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct: 12883359 atacccctattaaatggttctcgtacagttccaaaccccagttccaaatttcaatccaga 12883418

                                                                            
Query: 61       gccaaagcaaatgtccaattatgcactcccattacatatttgtagtccatttacaagtgt 120
                |||||| ||||||||||||||| || ||||||||||||||||||||| ||||||||||||
Sbjct: 12883419 gccaaatcaaatgtccaattatacagtcccattacatatttgtagtctatttacaagtgt 12883478

                 
Query: 121      c 121
                |
Sbjct: 12883479 c 12883479



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 292      gccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgcc 351
                |||||| |||| ||| | ||||||||||||| ||||||| |||| ||| ||  |||||||
Sbjct: 23200745 gccggccgcacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcatgcc 23200686

                   
Query: 352      gag 354
                |||
Sbjct: 23200685 gag 23200683



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 142      tctggaatctacaaattccat 162
                |||||||||||||||||||||
Sbjct: 12883478 tctggaatctacaaattccat 12883498
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  133 bits (67), Expect = 6e-28
 Identities = 89/95 (93%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                            
Query: 282      cttttgcccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggct- 340
                ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| 
Sbjct: 16934537 cttttccccagccggctgcacatgcacaccacctgctcgacgaaatgtcgagccaggctg 16934596

                                                   
Query: 341      agtggcatgccgagccaggcaggttgatgcgccgc 375
                ||||||||||||||||||||||| ||| |||||||
Sbjct: 16934597 agtggcatgccgagccaggcaggctgacgcgccgc 16934631



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 76      caattatgcactcccattacatatttgtagtccatttacaa 116
               ||||||| |||||||||||||| |||| ||||||| |||||
Sbjct: 9609778 caattatacactcccattacatgtttgcagtccatctacaa 9609818



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 152      acaaattccatttacagttctacaaaacattgctattaca 191
                ||||||||||||| |||||||||| || ||| ||||||||
Sbjct: 16934405 acaaattccatttgcagttctacagaatattcctattaca 16934444
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  133 bits (67), Expect = 6e-28
 Identities = 89/95 (93%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                            
Query: 282      cttttgcccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggct- 340
                ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| 
Sbjct: 16887770 cttttccccagccggctgcacatgcacaccacctgctcgacgaaatgtcgagccaggctg 16887829

                                                   
Query: 341      agtggcatgccgagccaggcaggttgatgcgccgc 375
                ||||||||||||||||||||||| ||| |||||||
Sbjct: 16887830 agtggcatgccgagccaggcaggctgacgcgccgc 16887864



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 76      caattatgcactcccattacatatttgtagtccatttacaa 116
               ||||||| |||||||||||||| |||| ||||||| |||||
Sbjct: 9609663 caattatacactcccattacatgtttgcagtccatctacaa 9609703



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 152      acaaattccatttacagttctacaaaacattgctattaca 191
                ||||||||||||| |||||||||| || ||| ||||||||
Sbjct: 16887638 acaaattccatttgcagttctacagaatattcctattaca 16887677
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>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 150238

 Score =  133 bits (67), Expect = 6e-28
 Identities = 89/95 (93%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                         
Query: 282   cttttgcccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggct- 340
             ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| 
Sbjct: 56580 cttttccccagccggctgcacatgcacaccacctgctcgacgaaatgtcgagccaggctg 56639

                                                
Query: 341   agtggcatgccgagccaggcaggttgatgcgccgc 375
             ||||||||||||||||||||||| ||| |||||||
Sbjct: 56640 agtggcatgccgagccaggcaggctgacgcgccgc 56674



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 152   acaaattccatttacagttctacaaaacattgctattaca 191
             ||||||||||||| |||||||||| || ||| ||||||||
Sbjct: 56448 acaaattccatttgcagttctacagaatattcctattaca 56487
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  123 bits (62), Expect = 6e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                            
Query: 184      ctattacagttgggccaccatcctctctgccagcccaagtctattcttcctcccccgcag 243
                |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| 
Sbjct: 16257336 ctattacagttgggccaccatcctctctgccagcccaagtctatcctttctcacccgcaa 16257277

                                      
Query: 244      gcccatcccttctgcagcctaa 265
                |||||||||| |||||||||||
Sbjct: 16257276 gcccatccctcctgcagcctaa 16257255



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                            
Query: 2        taccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccagag 61
                ||||| ||||||||| | | | ||||| |||||||| |||||| || |||||| ||||||
Sbjct: 11684952 tacccaaattaaacattccatttacagctccaaaccacaattcaaggtttcaacccagag 11684893

                                 
Query: 62       ccaaagcaaatgtccaa 78
                ||||| |||||||||||
Sbjct: 11684892 ccaaaccaaatgtccaa 11684876
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>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1104G07
          Length = 119643

 Score =  123 bits (62), Expect = 6e-25
 Identities = 77/82 (93%)
 Strand = Plus / Minus

                                                                         
Query: 184   ctattacagttgggccaccatcctctctgccagcccaagtctattcttcctcccccgcag 243
             |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| 
Sbjct: 47514 ctattacagttgggccaccatcctctctgccagcccaagtctatcctttctcacccgcaa 47455

                                   
Query: 244   gcccatcccttctgcagcctaa 265
             |||||||||| |||||||||||
Sbjct: 47454 gcccatccctcctgcagcctaa 47433
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 69/76 (90%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                            
Query: 289      ccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggc-tagtggca 347
                |||||||||||||||||||||||||||||||||| || || | ||||||||  |||| ||
Sbjct: 14608974 ccagccggctgcacatgcacaccacctgctcgacgaagtgccgagccaggcggagtgaca 14608915

                                
Query: 348      tgccgagccaggcagg 363
                ||||||||||||||||
Sbjct: 14608914 tgccgagccaggcagg 14608899



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 26       cagttccaaaccccaattccagatttcaatccagagccaaagcaaatgtccaa 78
                ||||||||||||||| ||||| ||||| | ||||||||||| |||| ||||||
Sbjct: 11009158 cagttccaaaccccagttccaaatttcgacccagagccaaatcaaaagtccaa 11009106



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 289      ccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcat 348
                |||||||| || || ||| | ||||||||||||| ||||||| |||| ||| ||  ||||
Sbjct: 16117496 ccagccggttgaacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcat 16117437

                        
Query: 349      gccgagcc 356
                ||||||||
Sbjct: 16117436 gccgagcc 16117429
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>dbj|AP005914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0027A16
          Length = 129953

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 69/76 (90%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                         
Query: 289   ccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggc-tagtggca 347
             |||||||||||||||||||||||||||||||||| || || | ||||||||  |||| ||
Sbjct: 63235 ccagccggctgcacatgcacaccacctgctcgacgaagtgccgagccaggcggagtgaca 63176

                             
Query: 348   tgccgagccaggcagg 363
             ||||||||||||||||
Sbjct: 63175 tgccgagccaggcagg 63160
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>dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0084D17
          Length = 143931

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                      
Query: 1     ataccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatcc 57
             ||||||||||||||| |||||| |  |||||||||||||||||||| ||||||||||
Sbjct: 46937 ataccccaattaaactgttcttatttagttccaaaccccaattccatatttcaatcc 46881
to top
>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0467G09
          Length = 158204

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                          
Query: 2      taccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccagag 61
              ||||| ||||||||| | | | ||||| |||||||| |||||| || |||||| ||||||
Sbjct: 145223 tacccaaattaaacattccatttacagctccaaaccacaattcaaggtttcaacccagag 145164

                               
Query: 62     ccaaagcaaatgtccaa 78
              ||||| |||||||||||
Sbjct: 145163 ccaaaccaaatgtccaa 145147
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>dbj|AP005390.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0075O18
          Length = 125411

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 2     taccccaattaaacagttcttgtacagttccaaaccccaattccagatttcaatccagag 61
             ||||| ||||||||| | | | ||||| |||||||| |||||| || |||||| ||||||
Sbjct: 14652 tacccaaattaaacattccatttacagctccaaaccacaattcaaggtttcaacccagag 14593

                              
Query: 62    ccaaagcaaatgtccaa 78
             ||||| |||||||||||
Sbjct: 14592 ccaaaccaaatgtccaa 14576
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>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0501G08
          Length = 173505

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 26    cagttccaaaccccaattccagatttcaatccagagccaaagcaaatgtccaa 78
             ||||||||||||||| ||||| ||||| | ||||||||||| |||| ||||||
Sbjct: 93240 cagttccaaaccccagttccaaatttcgacccagagccaaatcaaaagtccaa 93188
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 52       caatccagagccaaagcaaatgtccaattat 82
                ||||||||||||||| |||||||||||||||
Sbjct: 13604167 caatccagagccaaatcaaatgtccaattat 13604197
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>dbj|AP006750.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1120G10
          Length = 38102

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 52    caatccagagccaaagcaaatgtccaattat 82
             ||||||||||||||| |||||||||||||||
Sbjct: 29983 caatccagagccaaatcaaatgtccaattat 30013
to top
>dbj|AK062975.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E09, full
            insert sequence
          Length = 1018

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 52   caatccagagccaaagcaaatgtccaattat 82
            ||||||||||||||| |||||||||||||||
Sbjct: 1013 caatccagagccaaatcaaatgtccaattat 983
to top
>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 76    caattatgcactcccattacatatttgtagtccatttacaa 116
             ||||||| |||||||||||||| |||| ||||||| |||||
Sbjct: 73089 caattatacactcccattacatgtttgcagtccatctacaa 73129
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>dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474B11
          Length = 141702

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 184   ctattacagttgggccaccatcctctctgccagccc 219
             ||||||||||||||||||| | |||||| |||||||
Sbjct: 27602 ctattacagttgggccacccttctctcttccagccc 27637
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>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0618D11
          Length = 150103

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                          
Query: 289    ccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcat 348
              |||||||| || || ||| | ||||||||||||| ||||||| |||| ||| ||  ||||
Sbjct: 146225 ccagccggttgaacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcat 146166

                      
Query: 349    gccgagcc 356
              ||||||||
Sbjct: 146165 gccgagcc 146158
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>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0040M10
          Length = 162790

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 289   ccagccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcat 348
             |||||||| || || ||| | ||||||||||||| ||||||| |||| ||| ||  ||||
Sbjct: 22289 ccagccggttgaacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcat 22230

                     
Query: 349   gccgagcc 356
             ||||||||
Sbjct: 22229 gccgagcc 22222
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>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0042E08
          Length = 166257

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 184    ctattacagttgggccaccatcctctctgccagccc 219
              ||||||||||||||||||| | |||||| |||||||
Sbjct: 136267 ctattacagttgggccacccttctctcttccagccc 136302
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>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0088K21, complete sequence
          Length = 153239

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                          
Query: 292    gccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgcc 351
              |||||| |||| ||| | ||||||||||||| ||||||| |||| ||| ||  |||||||
Sbjct: 150552 gccggccgcacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcatgcc 150493

                 
Query: 352    gag 354
              |||
Sbjct: 150492 gag 150490
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>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0068E24, complete sequence
          Length = 141492

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 292   gccggctgcacatgcacaccacctgctcgacaaaatgtcaagccaggctagtggcatgcc 351
             |||||| |||| ||| | ||||||||||||| ||||||| |||| ||| ||  |||||||
Sbjct: 43342 gccggccgcacgtgcccgccacctgctcgacgaaatgtcgagccgggcgagcagcatgcc 43283

                
Query: 352   gag 354
             |||
Sbjct: 43282 gag 43280
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>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 302   catgcacaccacctgctcgacaaaatg 328
             ||||||||||| |||||||||||||||
Sbjct: 36042 catgcacaccagctgctcgacaaaatg 36068
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>gb|DQ023263.1| Macaca mulatta 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1)
             gene, complete cds
          Length = 40709

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 30    tccaaaccccaattccagatttc 52
             |||||||||||||||||||||||
Sbjct: 37484 tccaaaccccaattccagatttc 37506
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>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
          Length = 144628

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 304   tgcacaccacctgctcgacaaaatgtc 330
             |||||||||||||||||| ||||||||
Sbjct: 24780 tgcacaccacctgctcgataaaatgtc 24806
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>ref|XM_481901.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1227

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 236 ccccgcaggcccatcccttctgcagcctaa 265
           ||||||| |||||||||| |||||||||||
Sbjct: 528 ccccgcaagcccatccctcctgcagcctaa 499
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>gb|AC166826.4| Mus musculus BAC clone RP23-370K22 from chromosome 16, complete sequence
          Length = 180840

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 297    ctgcacatgcacaccacctgc 317
              |||||||||||||||||||||
Sbjct: 176807 ctgcacatgcacaccacctgc 176787
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>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence
          Length = 189550

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 297    ctgcacatgcacaccacctgc 317
              |||||||||||||||||||||
Sbjct: 174805 ctgcacatgcacaccacctgc 174825
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>gb|AC127560.4| Mus musculus BAC clone RP24-267I18 from chromosome 5, complete sequence
          Length = 186768

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    ccattacatatttgtagtcca 109
             |||||||||||||||||||||
Sbjct: 93879 ccattacatatttgtagtcca 93859
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>emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein beta-subunit-like protein
          Length = 1261

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 308 caccacctgctcgacaaaatg 328
           |||||||||||||||||||||
Sbjct: 56  caccacctgctcgacaaaatg 76
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>gb|AC006570.6| Arabidopsis thaliana chromosome 2 clone T16I21 map mi421, complete
             sequence
          Length = 76183

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 303   atgcacaccacctgctcgacaaaat 327
             |||||||||||||| ||||||||||
Sbjct: 54612 atgcacaccacctgttcgacaaaat 54636
to top
>gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019H15 map 15q21.2, complete
             sequence
          Length = 176872

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 56    ccagagccaaagcaaatgtccaattatgc 84
             |||||||||||| |||| |||||||||||
Sbjct: 52186 ccagagccaaagtaaatatccaattatgc 52214
to top
>gb|AC004155.1|AC004155 Mus musculus DNA from BAC 10818 containing the Ercc-4 gene, complete
             sequence
          Length = 128026

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 297   ctgcacatgcacaccacctgc 317
             |||||||||||||||||||||
Sbjct: 21146 ctgcacatgcacaccacctgc 21166
to top
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1057_E05
          Length = 103229

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   caccacctgctcgacaaaatg 328
             |||||||||||||||||||||
Sbjct: 77596 caccacctgctcgacaaaatg 77576
to top
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1354_H07
          Length = 157974

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 308  caccacctgctcgacaaaatg 328
            |||||||||||||||||||||
Sbjct: 2882 caccacctgctcgacaaaatg 2862
to top
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0417F02
          Length = 150660

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    caccacctgctcgacaaaatg 328
              |||||||||||||||||||||
Sbjct: 130076 caccacctgctcgacaaaatg 130056
to top
>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E02
          Length = 139321

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   caccacctgctcgacaaaatg 328
             |||||||||||||||||||||
Sbjct: 29693 caccacctgctcgacaaaatg 29673
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>gb|AC159248.4| Mus musculus BAC clone RP24-254P11 from chromosome 16, complete
             sequence
          Length = 172440

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 297   ctgcacatgcacaccacctgc 317
             |||||||||||||||||||||
Sbjct: 82021 ctgcacatgcacaccacctgc 82001
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>gb|AC123661.22| Mus musculus chromosome 5, clone RP23-211E12, complete sequence
          Length = 190017

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     ccattacatatttgtagtcca 109
              |||||||||||||||||||||
Sbjct: 147724 ccattacatatttgtagtcca 147704
to top
>ref|XM_521130.1| PREDICTED: Pan troglodytes similar to SNF2/RAD54 family protein
            (LOC465709), mRNA
          Length = 3633

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 16   agttcttgtacagttccaaacccc 39
            |||||||||||| |||||||||||
Sbjct: 2441 agttcttgtacacttccaaacccc 2418
to top
>gb|AY596298.1| Haloarcula marismortui ATCC 43049 chromosome II, complete sequence
          Length = 288050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   agtgtcagatacaatttcca 135
             ||||||||||||||||||||
Sbjct: 94548 agtgtcagatacaatttcca 94529
to top
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete
              sequence
          Length = 132292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    gcacaccacctgctcgacaaaatg 328
              |||| |||||||||||||||||||
Sbjct: 103282 gcacgccacctgctcgacaaaatg 103305
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 305      gcacaccacctgctcgacaaaatg 328
                |||| |||||||||||||||||||
Sbjct: 21598388 gcacgccacctgctcgacaaaatg 21598411
to top
>ref|XM_757464.1| Ustilago maydis 521 hypothetical protein (UM06410.1) partial mRNA
          Length = 2391

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   gttccaaaccccaattccag 47
            ||||||||||||||||||||
Sbjct: 1273 gttccaaaccccaattccag 1254
to top
>emb|AL513188.13| Human DNA sequence from clone RP11-322M21 on chromosome 6 Contains part
             of a novel gene (FLJ20342) and part of a novel gene,
             complete sequence
          Length = 87863

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tacaagtgtcagatacaatt 131
             ||||||||||||||||||||
Sbjct: 17883 tacaagtgtcagatacaatt 17864
to top
>emb|AL161716.14| Human DNA sequence from clone RP11-266E6 on chromosome 13 Contains the 3'
              end of a novel gene, a guanidinoacetate N-methyltransferase
              (GAMT) pseudogene and a CpG island, complete sequence
          Length = 164345

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 29     ttccaaaccccaattccagatttc 52
              ||||||||||||||||||| ||||
Sbjct: 122823 ttccaaaccccaattccagctttc 122800
to top
>emb|AL008583.1|HS327J16 Human DNA sequence from clone RP3-327J16 on chromosome 22q12.3-13.2,
             complete sequence
          Length = 111746

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   cctcctgcaccatgctccca 486
             ||||||||||||||||||||
Sbjct: 29841 cctcctgcaccatgctccca 29860
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ctgcacatgcacaccacctg 316
             ||||||||||||||||||||
Sbjct: 90602 ctgcacatgcacaccacctg 90621
to top
>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence
          Length = 167114

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tatttgtagtccatttacaa 116
             ||||||||||||||||||||
Sbjct: 66199 tatttgtagtccatttacaa 66218
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 57       cagagccaaagcaaatgtccaattatgcactcccattaca 96
                ||||||||||  |||||||||||||| || |||| |||||
Sbjct: 14186495 cagagccaaaataaatgtccaattatacagtcccgttaca 14186534
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 305      gcacaccacctgctcgacaaaatg 328
                |||| |||||||||||||||||||
Sbjct: 21591417 gcacgccacctgctcgacaaaatg 21591440
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 220      aagtctattcttcctccccc 239
                ||||||||||||||||||||
Sbjct: 16188328 aagtctattcttcctccccc 16188347
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>dbj|AP004821.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0676G08
          Length = 153154

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   aagtctattcttcctccccc 239
             ||||||||||||||||||||
Sbjct: 64735 aagtctattcttcctccccc 64754
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>dbj|AP005722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1261_A08
          Length = 162113

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 57   cagagccaaagcaaatgtccaattatgcactcccattaca 96
            ||||||||||  |||||||||||||| || |||| |||||
Sbjct: 3040 cagagccaaaataaatgtccaattatacagtcccgttaca 3079
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>dbj|AP005753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0084L05
          Length = 126264

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 57    cagagccaaagcaaatgtccaattatgcactcccattaca 96
             ||||||||||  |||||||||||||| || |||| |||||
Sbjct: 50623 cagagccaaaataaatgtccaattatacagtcccgttaca 50662
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>dbj|AK072986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000K10, full
           insert sequence
          Length = 3000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 305 gcacaccacctgctcgacaaaatg 328
           |||| |||||||||||||||||||
Sbjct: 658 gcacgccacctgctcgacaaaatg 635
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>emb|AL806512.9| Mouse DNA sequence from clone RP23-354A20 on chromosome 4, complete
             sequence
          Length = 211131

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    atgcactcccattacatatt 100
             ||||||||||||||||||||
Sbjct: 83632 atgcactcccattacatatt 83613


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,796,432
Number of Sequences: 3902068
Number of extensions: 4796432
Number of successful extensions: 96560
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95858
Number of HSP's gapped (non-prelim): 697
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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