Clone Name | rbaet95c07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete cds Length = 1508 Score = 791 bits (399), Expect = 0.0 Identities = 405/407 (99%) Strand = Plus / Minus Query: 1 aaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaagaac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 aaagattaaaacttcgtttatttactcttccaaaacagaatggataattgaatcaagaac 1412 Query: 61 ttcaaaaatagaactaggcaagtggctaacgttgatccgacaccaggcacacattggcac 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1411 ttcaaaaataaaactaggcaagtggctaacgttgatccgacaccaggcacacattggcac 1352 Query: 121 atggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtgtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1351 atggcaggtacgtgcaaacgggacctagtcgaggctgtagcagcagttcttgaaggtgtt 1292 Query: 181 catgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagacgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 catgtcgcggctaaagagtggcacgtaggcgtccacgctgccgtcgcccaagaaagacgg 1232 Query: 241 cagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 cagcaggatgagcagaccctccaccggcaggtagctgggcatgaagaagaatggccgccc 1172 Query: 301 gccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttggg 360 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1171 gccgccgaagtccatgtcgtagaacgggatcagcagccagctgtccacctcgatgttggg 1112 Query: 361 gctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctcct 407 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1111 gctcagcaccatgtccgccgcgtcggccgtcgccaccagccgctcct 1065
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA, partial cds Length = 1220 Score = 474 bits (239), Expect = e-130 Identities = 301/319 (94%), Gaps = 2/319 (0%) Strand = Plus / Minus Query: 89 acgttgatccgacaccaggcacacattggcacatggcaggtacgtgcaaacgggacctag 148 |||| |||||||||||| ||||||||| |||| |||||||||||| ||| ||| | |||| Sbjct: 1116 acgtcgatccgacaccacgcacacatttgcacttggcaggtacgt-caagcgg-agctag 1059 Query: 149 tcgaggctgtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtag 208 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1058 tcgagggtgtagcagcagttcttgaaagtgttcatgtcgcggctaaagagtggcacgtag 999 Query: 209 gcgtccacgctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggc 268 ||| |||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct: 998 gcgcccacgctgccgtcgcccaagaaggacggtagcaggatgagcaggccctccaccggc 939 Query: 269 aggtagctgggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacggg 328 ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||| Sbjct: 938 aggtagctgggcatgaagaagaagggccggccgccgccgaggtccatgtcgtagaacggg 879 Query: 329 atccgcagccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggcc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 atccgcagccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggcc 819 Query: 389 gtcgccaccagccgctcct 407 |||||||||||||| |||| Sbjct: 818 gtcgccaccagccgttcct 800 Score = 67.9 bits (34), Expect = 2e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 46 aattgaatcaagaacttcaaaaatagaactaggcaagt 83 ||||||||||||||||||||||||| |||||||||||| Sbjct: 1188 aattgaatcaagaacttcaaaaatacaactaggcaagt 1151
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 379 bits (191), Expect = e-102 Identities = 236/251 (94%) Strand = Plus / Minus Query: 157 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 1257 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1198 Query: 217 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1197 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1138 Query: 277 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 336 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1137 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1078 Query: 337 ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 396 ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 1077 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 1018 Query: 397 cagccgctcct 407 ||||||||||| Sbjct: 1017 cagccgctcct 1007
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 379 bits (191), Expect = e-102 Identities = 236/251 (94%) Strand = Plus / Minus Query: 157 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 11597 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 11538 Query: 217 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 11537 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 11478 Query: 277 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 336 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 11477 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 11418 Query: 337 ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 396 ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 11417 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 11358 Query: 397 cagccgctcct 407 ||||||||||| Sbjct: 11357 cagccgctcct 11347 Score = 321 bits (162), Expect = 1e-84 Identities = 228/250 (91%) Strand = Plus / Plus Query: 158 tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 217 |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 13909 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 13968 Query: 218 ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 277 ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 13969 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 14028 Query: 278 ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 337 ||| |||| | ||||||| | |||| ||||||||| | ||||||||||||||||||||| Sbjct: 14029 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 14088 Query: 338 cagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccacc 397 |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| Sbjct: 14089 cagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccacc 14148 Query: 398 agccgctcct 407 |||||||||| Sbjct: 14149 agccgctcct 14158
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 379 bits (191), Expect = e-102 Identities = 236/251 (94%) Strand = Plus / Minus Query: 157 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 33960700 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 33960641 Query: 217 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 33960640 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 33960581 Query: 277 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 336 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 33960580 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 33960521 Query: 337 ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 396 ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 33960520 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 33960461 Query: 397 cagccgctcct 407 ||||||||||| Sbjct: 33960460 cagccgctcct 33960450 Score = 321 bits (162), Expect = 1e-84 Identities = 228/250 (91%) Strand = Plus / Plus Query: 158 tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 217 |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 33963012 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 33963071 Query: 218 ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 277 ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 33963072 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 33963131 Query: 278 ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 337 ||| |||| | ||||||| | |||| ||||||||| | ||||||||||||||||||||| Sbjct: 33963132 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 33963191 Query: 338 cagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccacc 397 |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| Sbjct: 33963192 cagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccacc 33963251 Query: 398 agccgctcct 407 |||||||||| Sbjct: 33963252 agccgctcct 33963261
>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full insert sequence Length = 1640 Score = 379 bits (191), Expect = e-102 Identities = 236/251 (94%) Strand = Plus / Minus Query: 157 gtagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccac 216 ||||||||||||||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct: 1411 gtagcagcagttcttgaagacgtccatgtcgcggctgaagagtggcacgtacgcgtcaac 1352 Query: 217 gctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagct 276 ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1351 gctcccgtcgccgaagaaagacggcagcaggatgagcaaaccttccaccggcaggtagct 1292 Query: 277 gggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcag 336 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1291 gggcatgaagaagaatggccgcccgccgccgaagtcgaggtcgtagaacgggatccgcag 1232 Query: 337 ccagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccac 396 ||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 1231 ccagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccac 1172 Query: 397 cagccgctcct 407 ||||||||||| Sbjct: 1171 cagccgctcct 1161
>ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 321 bits (162), Expect = 1e-84 Identities = 228/250 (91%) Strand = Plus / Minus Query: 158 tagcagcagttcttgaaggtgttcatgtcgcggctaaagagtggcacgtaggcgtccacg 217 |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||| Sbjct: 1328 tagcagcagttcttgaaggtgtccatgtcgtggctgaagagtggcacgtaggcgtcgacg 1269 Query: 218 ctgccgtcgcccaagaaagacggcagcaggatgagcagaccctccaccggcaggtagctg 277 ||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1268 ctgccgtcgccggagaaagatggcaggaggatgagaagaccctccaccggcaggtagcta 1209 Query: 278 ggcatgaagaagaatggccgcccgccgccgaagtccatgtcgtagaacgggatccgcagc 337 ||| |||| | ||||||| | |||| ||||||||| | ||||||||||||||||||||| Sbjct: 1208 ggcgtgaacaggaatggctggccgctgccgaagtcaagctcgtagaacgggatccgcagc 1149 Query: 338 cagctgtccacctcgatgttggggctcagcaccatgtccgccgcgtcggccgtcgccacc 397 |||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| Sbjct: 1148 cagctgtccacctcgatgttcgggctcagcaccatctccgccgcgtcggccgacgccacc 1089 Query: 398 agccgctcct 407 |||||||||| Sbjct: 1088 agccgctcct 1079
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Plus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 358 |||||||||||||| | |||||||| ||| | |||||||||||||||||||| || Sbjct: 76714 ccgccgccgaagtcgagctcgtagaagtcgatgcccagccagctgtccacctcgacgtcc 76773 Query: 359 gggctcagcacc 370 |||| ||||||| Sbjct: 76774 gggcacagcacc 76785
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Plus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 358 |||||||||||||| | |||||||| ||| | |||||||||||||||||||| || Sbjct: 872290 ccgccgccgaagtcgagctcgtagaagtcgatgcccagccagctgtccacctcgacgtcc 872349 Query: 359 gggctcagcacc 370 |||| ||||||| Sbjct: 872350 gggcacagcacc 872361
>ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 Score = 46.1 bits (23), Expect = 0.088 Identities = 59/71 (83%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 358 |||||||||||||| | ||||||||||||| ||||||||||||||||| | || | Sbjct: 1205 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctccaggtcg 1146 Query: 359 gggctcagcac 369 |||| |||||| Sbjct: 1145 gggcacagcac 1135
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 194 aagagtggcacgtaggcgtccacgctgccgtcgcc 228 ||||||||||||||| |||| | |||||||||||| Sbjct: 1340 aagagtggcacgtagacgtcgatgctgccgtcgcc 1306 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 356 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 1235 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 1178
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 194 aagagtggcacgtaggcgtccacgctgccgtcgcc 228 ||||||||||||||| |||| | |||||||||||| Sbjct: 26918691 aagagtggcacgtagacgtcgatgctgccgtcgcc 26918657 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 356 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 26918586 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 26918529
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 194 aagagtggcacgtaggcgtccacgctgccgtcgcc 228 ||||||||||||||| |||| | |||||||||||| Sbjct: 97691 aagagtggcacgtagacgtcgatgctgccgtcgcc 97657 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 356 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 97586 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 97529
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.088 Identities = 59/71 (83%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 358 |||||||||||||| | ||||||||||||| ||||||||||||||||| | || | Sbjct: 21163512 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctccaggtcg 21163453 Query: 359 gggctcagcac 369 |||| |||||| Sbjct: 21163452 gggcacagcac 21163442
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Minus Query: 194 aagagtggcacgtaggcgtccacgctgccgtcgcc 228 ||||||||||||||| |||| | |||||||||||| Sbjct: 27010014 aagagtggcacgtagacgtcgatgctgccgtcgcc 27009980 Score = 44.1 bits (22), Expect = 0.35 Identities = 49/58 (84%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgt 356 |||||||||||||| | ||||||||| || | |||||||||||||||||| |||| Sbjct: 27009909 ccgccgccgaagtcgaggtcgtagaagctcatgcccagccagctgtccacctccatgt 27009852
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 46.1 bits (23), Expect = 0.088 Identities = 59/71 (83%) Strand = Plus / Minus Query: 299 ccgccgccgaagtccatgtcgtagaacgggatccgcagccagctgtccacctcgatgttg 358 |||||||||||||| | ||||||||||||| ||||||||||||||||| | || | Sbjct: 34269 ccgccgccgaagtcgagctcgtagaacgggaaggtgagccagctgtccacctccaggtcg 34210 Query: 359 gggctcagcac 369 |||| |||||| Sbjct: 34209 gggcacagcac 34199
>emb|AJ831467.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype LL-0 Length = 2478 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 717 tcgtttatttactcttccaaa 697
>emb|AJ831466.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype LER-1 Length = 2476 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 715 tcgtttatttactcttccaaa 695
>emb|AJ831465.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype BA-1 Length = 2419 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831464.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype WL-0 Length = 2474 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831463.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype TSU-1 Length = 2441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831462.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype TAC Length = 2445 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 641 tcgtttatttactcttccaaa 621
>emb|AJ831461.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype TA-0 Length = 2450 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 643 tcgtttatttactcttccaaa 623
>emb|AJ831459.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype SEI-0 Length = 2442 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831458.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype RSCH-0 Length = 2452 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 644 tcgtttatttactcttccaaa 624
>emb|AJ831457.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype PI-0 Length = 2444 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831456.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype PET-1 Length = 2439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 635 tcgtttatttactcttccaaa 615
>emb|AJ831455.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype PER-1 Length = 2445 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 642 tcgtttatttactcttccaaa 622
>emb|AJ831454.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype NO-0 Length = 2449 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 638 tcgtttatttactcttccaaa 618
>emb|AJ831453.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MT-0 Length = 2444 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831452.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MRK-0 Length = 2440 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 636 tcgtttatttactcttccaaa 616
>emb|AJ831451.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MR-0 Length = 2445 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831450.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype MH-0 Length = 2452 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831449.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype LIP-0 Length = 2440 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831448.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype HODJA Length = 2454 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 645 tcgtttatttactcttccaaa 625
>emb|AJ831447.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype EI-2 Length = 2450 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 644 tcgtttatttactcttccaaa 624
>emb|AJ831446.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype DB-1 Length = 2445 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831445.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype CVI-0 Length = 2473 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 642 tcgtttatttactcttccaaa 622
>emb|AJ831444.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype CAL-0 Length = 2451 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 639 tcgtttatttactcttccaaa 619
>emb|AJ831443.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype AG-0 Length = 2443 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 640 tcgtttatttactcttccaaa 620
>emb|AJ831442.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype KA-0 Length = 2434 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 629 tcgtttatttactcttccaaa 609
>emb|AJ831441.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype ABD-0 Length = 2457 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 647 tcgtttatttactcttccaaa 627
>emb|AJ831440.1| Arabidopsis thaliana partial tgg1 gene for thioglucoside glucohydrolase, exons 1-12, ecotype COL-0 Length = 2489 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 724 tcgtttatttactcttccaaa 704
>emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in linkage group 7, complete sequence Length = 180005 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gtttatttactcttccaaaac 36 ||||||||||||||||||||| Sbjct: 103054 gtttatttactcttccaaaac 103074
>emb|AL365215.23| Human DNA sequence from clone RP11-416D8 on chromosome 10 Contains the 5' end of the RSU1 gene for Ras suppressor protein 1, the 3' end of the CUBN gene for cubilin (intrinsic factor-cobalamin receptor) and a CpG island, complete sequence Length = 184703 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 ctcgatgttggggctcagcac 369 ||||||||||||||||||||| Sbjct: 51790 ctcgatgttggggctcagcac 51810
>emb|BX537251.10| Zebrafish DNA sequence from clone DKEY-249G23 in linkage group 9, complete sequence Length = 169308 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 gtttatttactcttccaaaac 36 ||||||||||||||||||||| Sbjct: 81226 gtttatttactcttccaaaac 81206
>emb|BX027057.1|CNS08T1H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40CC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 279 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 gcgtcggccgtcgccaccagc 400 ||||||||||||||||||||| Sbjct: 131 gcgtcggccgtcgccaccagc 111
>emb|X79194.1|ATTGG1 A.thaliana TGG1 gene for myrosinase Length = 5023 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 2559 tcgtttatttactcttccaaa 2539
>emb|BX284752.1|NCB23B10 Neurospora crassa DNA linkage group II BAC contig B23B10 Length = 99967 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 agtggctaacgttgatccgacacca 105 |||||||||||| |||||||||||| Sbjct: 33123 agtggctaacgtcgatccgacacca 33147
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gccgtcgccaccagccgctcc 406 ||||||||||||||||||||| Sbjct: 100054 gccgtcgccaccagccgctcc 100074
>dbj|AK089687.2| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008L10 product:interleukin 13 receptor, alpha 2, full insert sequence Length = 2206 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ctcttccaaaacagaatggat 45 ||||||||||||||||||||| Sbjct: 213 ctcttccaaaacagaatggat 193
>emb|AL807780.7| Mouse DNA sequence from clone RP23-456P12 on chromosome X, complete sequence Length = 158108 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ctcttccaaaacagaatggat 45 ||||||||||||||||||||| Sbjct: 34748 ctcttccaaaacagaatggat 34768
>ref|XM_315590.2| Anopheles gambiae str. PEST ENSANGP00000017720 (ENSANGG00000015231), partial mRNA Length = 966 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 gcgtcggccgtcgccaccagc 400 ||||||||||||||||||||| Sbjct: 820 gcgtcggccgtcgccaccagc 840
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 Length = 127053 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 14 tcgtttatttactcttccaaa 34 ||||||||||||||||||||| Sbjct: 64558 tcgtttatttactcttccaaa 64538
>ref|XM_633465.1| Dictyostelium discoideum hypothetical protein (DDB0218618), partial mRNA Length = 1587 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tgaatcaagaacttcaaaaa 68 |||||||||||||||||||| Sbjct: 1145 tgaatcaagaacttcaaaaa 1164
>gb|AF025467.1| Caenorhabditis elegans cosmid R148, complete sequence Length = 37154 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 caagaaagacggcagcagga 248 |||||||||||||||||||| Sbjct: 2399 caagaaagacggcagcagga 2418
>gb|AC144673.3| Mus musculus BAC clone RP23-40K14 from chromosome 14, complete sequence Length = 162333 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ttaaaacttcgtttatttac 25 |||||||||||||||||||| Sbjct: 115760 ttaaaacttcgtttatttac 115741
>gb|AE007288.1| Sinorhizobium meliloti 1021 plasmid pSymA section 94 of 121 of the complete plasmid sequence Length = 10943 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tcggccgtcgccaccagccg 402 |||||||||||||||||||| Sbjct: 2761 tcggccgtcgccaccagccg 2742
>gb|AY577002.1| Danio rerio clone RZ150A4A11 C22orf4-like protein mRNA, complete cds Length = 2068 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 caagaaagacggcagcagga 248 |||||||||||||||||||| Sbjct: 372 caagaaagacggcagcagga 391
>emb|AJ231133.1|SOF231133 Saccharum officinarum mRNA for caffeic acid 3-O-methyltransferase Length = 1486 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 caccatgtccgccgcgtcgg 386 |||||||||||||||||||| Sbjct: 335 caccatgtccgccgcgtcgg 316
>gb|AY365419.1| Saccharum hybrid cultivar caffeic acid 3-O-methyltransferase (COMT) gene, complete cds Length = 2012 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 caccatgtccgccgcgtcgg 386 |||||||||||||||||||| Sbjct: 231 caccatgtccgccgcgtcgg 212
>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence Length = 143534 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ttactcttccaaaacagaat 41 |||||||||||||||||||| Sbjct: 112095 ttactcttccaaaacagaat 112076
>gb|U13072.1| Caenorhabditis elegans cosmid C07D10, complete sequence Length = 27935 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttgaatcaagaacttcaaaa 67 |||||||||||||||||||| Sbjct: 19499 ttgaatcaagaacttcaaaa 19518
>ref|NM_181961.1| Caenorhabditis elegans R148.5b (R148.5) mRNA, complete cds Length = 1518 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 caagaaagacggcagcagga 248 |||||||||||||||||||| Sbjct: 637 caagaaagacggcagcagga 656
>ref|NM_065264.3| Caenorhabditis elegans R148.5a (R148.5) mRNA, complete cds Length = 1848 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 caagaaagacggcagcagga 248 |||||||||||||||||||| Sbjct: 637 caagaaagacggcagcagga 656
>ref|NM_214799.1| Danio rerio zgc:101677 (zgc:101677), mRNA Length = 2068 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 caagaaagacggcagcagga 248 |||||||||||||||||||| Sbjct: 372 caagaaagacggcagcagga 391
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 ccgccgcgtcggccgtcgccacca 398 ||||||||||| |||||||||||| Sbjct: 29600703 ccgccgcgtcgcccgtcgccacca 29600726
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 ccgccgcgtcggccgtcgccacca 398 ||||||||||| |||||||||||| Sbjct: 44288 ccgccgcgtcgcccgtcgccacca 44311
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 ccgccgcgtcggccgtcgccacca 398 ||||||||||| |||||||||||| Sbjct: 165209 ccgccgcgtcgcccgtcgccacca 165232
>dbj|AP003385.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-655M14, complete sequences Length = 174074 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 aggcacacattggcacatgg 124 |||||||||||||||||||| Sbjct: 72264 aggcacacattggcacatgg 72245 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,522,599 Number of Sequences: 3902068 Number of extensions: 3522599 Number of successful extensions: 76584 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 76252 Number of HSP's gapped (non-prelim): 327 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)