ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S26A1_MOUSE (P58735) Sulfate anion transporter 1 (SAT-1) (Solute... 33 0.26
2S26A1_RAT (P45380) Sulfate anion transporter 1 (SAT-1) (Solute c... 31 0.75
3RECK_MOUSE (Q9Z0J1) Reversion-inducing cysteine-rich protein wit... 31 0.75
4RECK_HUMAN (O95980) Reversion-inducing cysteine-rich protein wit... 31 0.75
5S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute... 30 2.2
6PKN3_MOUSE (Q8K045) Serine/threonine-protein kinase N3 (EC 2.7.1... 29 3.7
7PAFA2_HUMAN (Q99487) Platelet-activating factor acetylhydrolase ... 29 3.7
8SYE_SULTO (Q971D0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta... 28 4.8
9POLG_TMEVG (P08545) Genome polyprotein [Contains: Coat protein V... 28 8.3
10POLG_TMEVB (P08544) Genome polyprotein [Contains: Coat protein V... 28 8.3
11SYE_SULAC (Q4J8P2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta... 28 8.3

>S26A1_MOUSE (P58735) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1)
          Length = 704

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 32  GQIHRFYTSKLTGSIVTGFTAPQTDGP 112
           GQ+H  + S++ G+I TGF APQ   P
Sbjct: 314 GQLHTRFDSRVAGNIPTGFVAPQVPDP 340



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>S26A1_RAT (P45380) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1) (Canalicular sulfate transporter)
           (Sulfate/carbonate antiporter)
          Length = 703

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 32  GQIHRFYTSKLTGSIVTGFTAPQTDGP 112
           GQ+H  + S + G+I TGF APQ   P
Sbjct: 313 GQLHTRFGSSVAGNIPTGFVAPQIPDP 339



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>RECK_MOUSE (Q9Z0J1) Reversion-inducing cysteine-rich protein with Kazal motifs|
           precursor (mRECK)
          Length = 971

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 217 PGRPSVWSIGSPLASSHESFKFALNE*IHPIPRVDRSISLWCCETCDDRPCQFAC 53
           PG   + ++ +  AS        +N      P  + + SL+CC+  +D  CQ AC
Sbjct: 175 PGPSQIKAVENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNAC 229



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>RECK_HUMAN (O95980) Reversion-inducing cysteine-rich protein with Kazal motifs|
           precursor (hRECK) (Suppressor of tumorigenicity 15)
           (ST15)
          Length = 971

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -1

Query: 217 PGRPSVWSIGSPLASSHESFKFALNE*IHPIPRVDRSISLWCCETCDDRPCQFAC 53
           PG   + ++ +  AS        +N      P  + + SL+CC+  +D  CQ AC
Sbjct: 175 PGPSQIKAVENYCASISPQLIHCVNNYTQSYPMRNPTDSLYCCDRAEDHACQNAC 229



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>S26A1_HUMAN (Q9H2B4) Sulfate anion transporter 1 (SAT-1) (Solute carrier family|
           26 member 1)
          Length = 701

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 32  GQIHRFYTSKLTGSIVTGFTAPQTDGP 112
           GQ+H+ + S + G I TGF  PQ   P
Sbjct: 309 GQLHKRFGSSVAGDIPTGFMPPQVPEP 335



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>PKN3_MOUSE (Q8K045) Serine/threonine-protein kinase N3 (EC 2.7.11.13) (Protein|
           kinase PKN-beta) (Protein-kinase C-related kinase 3)
          Length = 878

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = -1

Query: 229 ACPPPGRPSVWSIGSPLASSHESF---KFALNE*IHPIPRVDRSISLWCCETCDDRPC 65
           A PP GRPS    G+P A+S  +F   K    E   P P+  R   L+  E     PC
Sbjct: 464 ASPPKGRPSTAVCGTPSAASPSNFLPMKTLSKEDTKPPPKPPR---LYLQEPAPGTPC 518



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>PAFA2_HUMAN (Q99487) Platelet-activating factor acetylhydrolase 2, cytoplasmic|
           (EC 3.1.1.47) (Serine-dependent phospholipase A2)
           (HSD-PLA2)
          Length = 392

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +2

Query: 32  GQIHRFYT--SKLTGSIVTGFTAPQTDGPIDPGNGMDSFIQSKL 157
           G +HR  T  + +TG+++  F + +T G +DP  G +  +++ L
Sbjct: 311 GSVHRSQTDFAFVTGNLIGKFFSTETRGSLDPYEGQEVMVRAML 354



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>SYE_SULTO (Q971D0) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 566

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +2

Query: 59  KLTGSIVTGFTAPQTDGPIDPGNGMDSFIQSKLKRLMTG 175
           K+ G  VT F AP  DGPI  GN   + I  K   +  G
Sbjct: 94  KVEGKFVTRF-APNPDGPIHLGNARAAIISYKYAEMYKG 131



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>POLG_TMEVG (P08545) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2303

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 223  PPPGRPSVWSIGSPLASSHESFKFALN 143
            PPP  P+V     PL  ++E F FA N
Sbjct: 1180 PPPACPNVMQPQGPLREANEGFTFAKN 1206



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>POLG_TMEVB (P08544) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2303

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 223  PPPGRPSVWSIGSPLASSHESFKFALN 143
            PPP  P+V     PL  ++E F FA N
Sbjct: 1180 PPPACPNVMQPQGPLREANEGFTFAKN 1206



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>SYE_SULAC (Q4J8P2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 567

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 62  LTGSIVTGFTAPQTDGPIDPGNGMDSFIQSKLKRLMTG 175
           ++G +VT F AP  DGP+  GN   + I  +  R+  G
Sbjct: 96  VSGVLVTRF-APNPDGPLHLGNARAAIISHEYARIYNG 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,687,592
Number of Sequences: 219361
Number of extensions: 641949
Number of successful extensions: 2033
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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