ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95c02 |
|---|---|
| Clone Library Name | barley_pub |
>PFPI_PYRKO (Q5JGM7) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 40.0 bits (92), Expect = 0.003 Identities = 30/110 (27%), Positives = 51/110 (46%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKR 283 +D D+++ +V+PGGR+PE++ ++ ASI G + ++ Sbjct: 57 VDPDEFDALVLPGGRAPEIVRLNEKAVAITKKMFEDGKPVASICHGPQILISAGVLKGRK 116 Query: 282 CASGVPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLL 133 S V +R AGA ++AE V DG V++ DL ++ V LL Sbjct: 117 GTSTVTIRDDVKNAGAEWIDAE-VVVDGNWVSSRHPGDLYAWMREFVKLL 165
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 36.2 bits (82), Expect = 0.042 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Frame = +2 Query: 173 GQLAAVTSFPSATVPSASTPTAPARLEI-TLMGTPLAHLLPLRSPAAARTRCPWSMLATT 349 G T+ S+++P+ ++ TAP + + MG P + +PL +P +T P + TT Sbjct: 724 GPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPAS--VPLPAPFFKQTTTPATAPTTT 781 Query: 350 FPLAANFATSATASCLVTSSS 412 PL A++ +A +TS+S Sbjct: 782 APLFTGLASATSAVAPITSAS 802
>Y1281_ARCFU (O28987) Hypothetical protein AF1281| Length = 168 Score = 36.2 bits (82), Expect = 0.042 Identities = 28/110 (25%), Positives = 46/110 (41%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKR 283 + V+DY +V+PGG+SPE + + A+I G + +R Sbjct: 57 VKVEDYAGLVIPGGKSPERVRINERAVEIVKDFLELGKPVAAICHGPQLLISAMAVKGRR 116 Query: 282 CASGVPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLL 133 S + +R AGA+ E V DG ++T+ DL F + +L Sbjct: 117 MTSWIGIRDDLIAAGAL-YEDRPVVVDGNVITSRMPDDLPYFCGELIKIL 165
>AMOT_HUMAN (Q4VCS5) Angiomotin| Length = 1084 Score = 34.3 bits (77), Expect = 0.16 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 7/102 (6%) Frame = +2 Query: 140 STG*AMNSARSGQLAAVTSFPSATV--PSASTPTAPARLEITLMGTPLAHLLPLRSPAAA 313 +T A++ A +GQ+ A S SA PSA+ A P L+P+ +PAAA Sbjct: 934 ATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAA 993 Query: 314 RTRCPWSMLATT-----FPLAANFATSATASCLVTSSSGERP 424 + P A T P A T A A V +S P Sbjct: 994 QASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGP 1035
>GS18_BACSU (P80876) General stress protein 18 (GSP18)| Length = 171 Score = 32.0 bits (71), Expect = 0.79 Identities = 24/110 (21%), Positives = 43/110 (39%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKR 283 ++ D++ +++PGG SP+ L +I G + ++ Sbjct: 60 VNSSDFDALLIPGGFSPDQLRADDRFVQFTKAFMTDKKPVFAICHGPQLLINAKALDGRK 119 Query: 282 CASGVPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLL 133 +RV AGA V+ E V +LVT+ + D+ F + LL Sbjct: 120 ATGYTSIRVDMENAGADVVDKEVVVCQDQLVTSRTPDDIPAFNRESLALL 169
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 31.6 bits (70), Expect = 1.0 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Frame = +2 Query: 161 SARSGQLAAVTSFPSATVPSASTP--TAPARLEITLMGTPLAHLLPLRSPAAARTRCPWS 334 S + A TS PSA+ +++TP T+ + T TP + S A T P + Sbjct: 265 SGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTT 324 Query: 335 MLATTFPLAANFATSATASCLVTSSS 412 TT P A AT++ S V++S+ Sbjct: 325 --DTTTPSEATTATTSPESTTVSAST 348 Score = 28.5 bits (62), Expect = 8.7 Identities = 30/126 (23%), Positives = 45/126 (35%) Frame = +2 Query: 35 NSAECDSAQCTQVITDGGEDALHLQIQKETVMPKRSTG*AMNSARSGQLAAVTSFPSATV 214 +SA ++ T + T + T P +T A A T+ +A Sbjct: 88 SSAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTTT------AAPTTAATTTAVTTAAS 141 Query: 215 PSASTPTAPARLEITLMGTPLAHLLPLRSPAAARTRCPWSMLATTFPLAANFATSATASC 394 SA T TA A T TP + A T P + TT A T+AT + Sbjct: 142 TSAETTTATA----TATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTA 197 Query: 395 LVTSSS 412 T+++ Sbjct: 198 ATTTAA 203
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 31.6 bits (70), Expect = 1.0 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Frame = +2 Query: 161 SARSGQLAAVTSFPSATVPSASTP--TAPARLEITLMGTPLAHLLPLRSPAAARTRCPWS 334 S + A TS PSA+ +++TP T+ + T TP + S A T P + Sbjct: 334 SGSTSTTGASTSTPSASTATSATPTSTSTSAAATTSTPTPTSAATSAESTTEAPTSTPTT 393 Query: 335 MLATTFPLAANFATSATASCLVTSSS 412 TT P A AT++ S V++S+ Sbjct: 394 --DTTTPSEATTATTSPESTTVSAST 417 Score = 28.5 bits (62), Expect = 8.7 Identities = 30/126 (23%), Positives = 45/126 (35%) Frame = +2 Query: 35 NSAECDSAQCTQVITDGGEDALHLQIQKETVMPKRSTG*AMNSARSGQLAAVTSFPSATV 214 +SA ++ T + T + T P +T A A T+ +A Sbjct: 88 SSAPSTASSTTSIPTSTSTETTTTTPTASTTTPTTTT------AAPTTAATTTAVTTAAS 141 Query: 215 PSASTPTAPARLEITLMGTPLAHLLPLRSPAAARTRCPWSMLATTFPLAANFATSATASC 394 SA T TA A T TP + A T P + TT A T+AT + Sbjct: 142 TSAETTTATA----TATSTPTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTA 197 Query: 395 LVTSSS 412 T+++ Sbjct: 198 ATTTAA 203
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 31.2 bits (69), Expect = 1.3 Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 7/96 (7%) Frame = +2 Query: 161 SARSGQLAAVTSFPSAT-VPSASTPTA------PARLEITLMGTPLAHLLPLRSPAAART 319 S+ S AA + PSAT +P +TP+A PAR I P PAAAR Sbjct: 240 SSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAARPPPRRTPGTPRPAAARA 299 Query: 320 RCPWSMLATTFPLAANFATSATASCLVTSSSGERPP 427 R P A P + C RPP Sbjct: 300 RAP----AGCSPARRTPSAPTDRRCRAARRGSPRPP 331
>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3| Length = 299 Score = 31.2 bits (69), Expect = 1.3 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 17/94 (18%) Frame = +2 Query: 185 AVTSFPSATVPSASTPTAPARLEITLMGT--PLAHLLPLRSPAAARTR------CPWSML 340 A T+ +A P+ +TPT P ++ ++ GT P + AA R R PWSM Sbjct: 193 ATTTTAAAPPPTTTTPTGPRQVTYSVTGTKAPGDIISVTYVDAAGRRRTQHNVYIPWSMT 252 Query: 341 ATTFPLAANFATSATAS---------CLVTSSSG 415 T P++ + S AS C +T+S G Sbjct: 253 VT--PISQSDVGSVEASSLFRVSKLNCSITTSDG 284
>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3| Length = 299 Score = 31.2 bits (69), Expect = 1.3 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 17/94 (18%) Frame = +2 Query: 185 AVTSFPSATVPSASTPTAPARLEITLMGT--PLAHLLPLRSPAAARTR------CPWSML 340 A T+ +A P+ +TPT P ++ ++ GT P + AA R R PWSM Sbjct: 193 ATTTTAAAPPPTTTTPTGPRQVTYSVTGTKAPGDIISVTYVDAAGRRRTQHNVYIPWSMT 252 Query: 341 ATTFPLAANFATSATAS---------CLVTSSSG 415 T P++ + S AS C +T+S G Sbjct: 253 VT--PISQSDVGSVEASSLFRVSKLNCSITTSDG 284
>MRAW_RALSO (Q8XVH9) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 319 Score = 31.2 bits (69), Expect = 1.3 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = +2 Query: 41 AECDSAQCTQVITDGGEDALHLQIQKETVMPKRSTG*AMNSARSGQLAAVTS 196 AE D +VI D GE+ +QI K V +R +G R+ +LAA+ + Sbjct: 144 AEADERDIARVIRDYGEERFAVQIAKAIVARRRESGTRGPLDRTSELAALVA 195
>PFPI_PYRAB (Q9V1F8) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 30.8 bits (68), Expect = 1.8 Identities = 28/110 (25%), Positives = 48/110 (43%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKR 283 ++ D+++ +V+PGGR+PE + ++ ASI G + +R Sbjct: 57 VNPDEFDALVLPGGRAPERVRLNEKAVEIAKKMFSEGKPVASICHGPQILISAGVLRGRR 116 Query: 282 CASGVPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLL 133 S ++ AG V+AE V DG V++ DL ++ V LL Sbjct: 117 GTSYPGIKDDMINAGVDWVDAE-VVVDGNWVSSRVPGDLYAWMREFVKLL 165
>M3K1_HUMAN (Q13233) Mitogen-activated protein kinase kinase kinase 1 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 1) (MEK kinase 1) (MEKK 1) (Fragment) Length = 1495 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 197 FPSATVPSASTPTAPARLEITLMGTPLAHLLPLRSPAAA 313 FP+ + PS+STP+ PA + L +P R P+A+ Sbjct: 963 FPALSTPSSSTPSVPAGTATDVSKHRLQGFIPCRIPSAS 1001
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = +1 Query: 163 GKVRPARRRHELPVGDRSFGLHAHRAGEVGDHPHGHPARAPLALEEPRRGEDEVP 327 G+ R R + RS + A AG+ D G A +P E P++G P Sbjct: 2089 GRARSTRSGMDRAAHQRSLEMAARAAGQAADKEAGPAAASPQESESPQKGSGSSP 2143 Score = 29.6 bits (65), Expect = 3.9 Identities = 19/60 (31%), Positives = 24/60 (40%) Frame = +2 Query: 182 AAVTSFPSATVPSASTPTAPARLEITLMGTPLAHLLPLRSPAAARTRCPWSMLATTFPLA 361 AA P PS P+ PA TP A L + AA +T C +L PL+ Sbjct: 2374 AATPEAPQEEKPSEKPPSPPAECTFDPSKTPPAESLSQENSAAEKTPCKAPVLPALPPLS 2433
>PFPI_PYRFU (Q51732) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/110 (22%), Positives = 48/110 (43%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKR 283 ++ D+++ +V+PGGR+PE + ++ A+I G + ++ Sbjct: 57 VNPDEFDALVLPGGRAPERVRLNEKAVEIARKMFTEGKPVATICHGPQILISAGVLKGRK 116 Query: 282 CASGVPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLL 133 S + +R AG ++ E V DG V++ DL ++ V LL Sbjct: 117 GTSYIGIRDDMINAGVEWIDRE-VVVDGNWVSSRHPGDLYAWMREFVKLL 165
>GSC_DROME (P54366) Homeobox protein goosecoid| Length = 419 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = +1 Query: 202 VGDRSFGLHAHRAGEVGDHPHGHPARAPLALEEPRRGEDEVPLVDAGDHLPLG-GELRHQ 378 V + GL H G HPHGHP L G+ + HL G R + Sbjct: 238 VSGAAAGLSGH--GHHPHHPHGHPHHPHLGAH--HHGQHHL------SHLGHGPPPKRKR 287 Query: 379 RHRLLFGHQQLRRAAAGHD 435 RHR +F +QL + A D Sbjct: 288 RHRTIFTEEQLEQLEATFD 306
>EMSY_BRARE (Q7ZUV7) Protein EMSY| Length = 1173 Score = 30.0 bits (66), Expect = 3.0 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Frame = +2 Query: 14 TARGQYLNSAECDSAQCTQVITDGGEDALHLQIQKETVMPKRSTG*AMNSARSGQLAAVT 193 TA+ L +A + Q+ + G + Q+Q ++PK S+ A+ S+ S + V+ Sbjct: 410 TAQSTALAAAGPGAKPTIQIKQESGVKIITQQMQPSKILPKPSSA-ALPSSSSAPIMVVS 468 Query: 194 SFPS-ATVPSASTPTAPA----RLEITLMGTPLAHLLPLRSPAAA 313 S + T STPT A R ++ MGT +A SPA A Sbjct: 469 SNGAIMTTKLVSTPTGSASTYTRPTVSPMGTRVA-----TSPAGA 508
>PFPI_PYRHO (O59413) Intracellular protease 1 (EC 3.2.-.-) (Intracellular| protease I) Length = 166 Score = 29.3 bits (64), Expect = 5.1 Identities = 26/110 (23%), Positives = 48/110 (43%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKR 283 ++ ++++ +V+PGGR+PE + ++ ASI G + ++ Sbjct: 57 VNPEEFDALVLPGGRAPERVRLNEKAVSIARKMFSEGKPVASICHGPQILISAGVLRGRK 116 Query: 282 CASGVPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLL 133 S ++ AG V+AE V DG V++ DL ++ V LL Sbjct: 117 GTSYPGIKDDMINAGVEWVDAE-VVVDGNWVSSRVPADLYAWMREFVKLL 165
>CB010_HUMAN (Q7Z570) Protein C2orf10| Length = 1209 Score = 29.3 bits (64), Expect = 5.1 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +2 Query: 194 SFPSATVPSASTPTAPARLEITLMGTPLA--HLLPLRSPAAARTRCPWSMLATTF 352 +FP A +P STP P L+ +L T + H L+ AAA + A TF Sbjct: 1068 TFPPAALPPPSTPVQPLPLQQSLCSTSVTTIHHTVLQQHAAAAAAAAAAAAAGTF 1122
>EGR1_BRARE (P26632) Early growth response protein 1 (EGR-1) (Krox24)| Length = 511 Score = 29.3 bits (64), Expect = 5.1 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 3/84 (3%) Frame = +2 Query: 164 ARSGQLAAVTSFPSATVPSASTPTAPARLEITLMGTPLAHL-LPLRS--PAAARTRCPWS 334 A G AAV S S SAS+P + IT +P++ P+ S + T P Sbjct: 399 AEKGATAAVQSSVSNISISASSPVSSYPSPITSYPSPVSSFPSPVNSCYSSPVHTSYPSP 458 Query: 335 MLATTFPLAANFATSATASCLVTS 406 +ATT+P A + + A+ TS Sbjct: 459 SIATTYPSATSTFQTQVATSFPTS 482
>I15RA_HUMAN (Q13261) Interleukin-15 receptor alpha chain precursor| (IL-15R-alpha) (IL-15RA) Length = 267 Score = 28.9 bits (63), Expect = 6.7 Identities = 19/77 (24%), Positives = 35/77 (45%) Frame = +2 Query: 200 PSATVPSASTPTAPARLEITLMGTPLAHLLPLRSPAAARTRCPWSMLATTFPLAANFATS 379 PS P+AS+P++ T P + L+P +SP+ T + P + + Sbjct: 124 PSGKEPAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTP-----SQT 178 Query: 380 ATASCLVTSSSGERPPG 430 + +T+S+ +PPG Sbjct: 179 TAKNWELTASASHQPPG 195
>CLPB_BDEBA (Q6MIV0) Chaperone clpB| Length = 855 Score = 28.9 bits (63), Expect = 6.7 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +1 Query: 292 LEEPRRGEDEVPLVDAGDHLPLGGELRHQRHRLLFGHQQLRRAAAGHDHALVVV 453 L+E ED +V +P+ L + +LL L+ G DHAL +V Sbjct: 529 LKEEVGPEDVAEVVAKWTGIPVSKMLESESQKLLHMEDSLKHRVVGQDHALTIV 582
>TRX_DROVI (Q24742) Protein trithorax| Length = 3828 Score = 28.9 bits (63), Expect = 6.7 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%) Frame = +2 Query: 107 QIQKETVMPKRSTG*AMNSARSGQLAAVTSFPSATVPSASTPTAPARLEIT--LMGTPLA 280 Q Q + P S +SA + AA + + T +++T TA A T L GTPL+ Sbjct: 224 QQQLQLNCPSASASSLSSSAAAAAAAAAPTTTTTTASASATLTATATSTSTSSLPGTPLS 283 Query: 281 HLLPLRSPAAARTRCPWSMLAT--TFPLAANFATSATASCLVTSSSG 415 + AAA + A+ T + N A +A A+ T+++G Sbjct: 284 VIAGGGGGAAAAALLLANPFASVETKVVEVNAAATAAATAAATAAAG 330
>OTX2_BRARE (Q91981) Homeobox protein OTX2 (ZOTX2)| Length = 289 Score = 28.9 bits (63), Expect = 6.7 Identities = 23/86 (26%), Positives = 37/86 (43%) Frame = +2 Query: 134 KRSTG*AMNSARSGQLAAVTSFPSATVPSASTPTAPARLEITLMGTPLAHLLPLRSPAAA 313 K+S+ S+ SG T S +VP+ ST TAP + +P A + PL P + Sbjct: 113 KKSSPAREASSESGASGQFTPPSSTSVPAISTTTAPVSI-----WSP-ASISPLSDPLST 166 Query: 314 RTRCPWSMLATTFPLAANFATSATAS 391 + C T+ A+ ++ S Sbjct: 167 SSSCMQRSYPMTYTQASGYSQGYAGS 192
>ANP_NOTCO (P24856) Ice-structuring glycoprotein precursor (ISGP) (Antifreeze| glycopeptide polyprotein) (AFGP polyprotein) [Contains: AFGP7 (AFGP 7); AFGP8 (AFGP 8); AFGP8-like] (Fragment) Length = 790 Score = 28.9 bits (63), Expect = 6.7 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 188 VTSFPSATVPSASTPTAPARLEITLMGTPLAHLLP-LRSPAAARTRCPWSMLATTFPLAA 364 VT+ P+AT +A+TP A TP P L A A T + A F AA Sbjct: 1 VTAAPAATAATAATPATAALNFAATAATPATPATPALIFAATAATAATPATAALNF--AA 58 Query: 365 NFATSATAS 391 AT ATA+ Sbjct: 59 TAATPATAA 67
>TYDP1_DROME (Q9VQM4) Probable tyrosyl-DNA phosphodiesterase (EC 3.1.4.-)| (Tyr-DNA phosphodiesterase) (Protein glaikit) Length = 580 Score = 28.9 bits (63), Expect = 6.7 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 232 HRAGEVGDHPHGHPARAPLALEEPRRGEDEVPLV 333 HR G V HP GH A L + +D +P+V Sbjct: 349 HREGSVRGHPWGHARLASLLAKHAAPIDDRIPVV 382
>NUC1_NEUCR (P20824) Phosphorus acquisition-controlling protein| Length = 823 Score = 28.9 bits (63), Expect = 6.7 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Frame = +1 Query: 211 RSFGLHAHRAGEVGDHPHGHPARAPLA--LEEPRRGEDEVPLVDAGDHLPLGGELRHQRH 384 R FG H A G H H L+ P G D ++ DH L ++ Q+H Sbjct: 46 RDFGADHHTAPHAGRHAADHLLHPSGGEHLDTPMTGTDMSMILSPVDHAMLRHGVQQQQH 105 Query: 385 RLLFGHQQ 408 HQQ Sbjct: 106 HQQQQHQQ 113
>YRAA_BACSU (O06006) Hypothetical protein yraA| Length = 169 Score = 28.5 bits (62), Expect = 8.7 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = -2 Query: 462 IDVDDYECVVVPGGRSPELL 403 +D D++ +++PGG SP+LL Sbjct: 60 VDASDFDALLIPGGFSPDLL 79
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 28.5 bits (62), Expect = 8.7 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = +2 Query: 269 TPLAHLLPLRSPAAARTRC--PWSMLATTFPLAANFATSA 382 +PL+ LLP P A T P ++ ATT A +F+TSA Sbjct: 1095 SPLSSLLPPPPPVATATATTVPATLAATTAAAATSFSTSA 1134
>YHBO_ECOLI (P45470) Protein yhbO| Length = 172 Score = 28.5 bits (62), Expect = 8.7 Identities = 23/107 (21%), Positives = 42/107 (39%) Frame = -2 Query: 450 DYECVVVPGGRSPELLVTKQEXXXXXXXXXXXXXXXASIDQGHLVXXXXXXXXXKRCASG 271 +++ +++PGG SP+ L +I G + ++ + Sbjct: 65 EFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAV 124 Query: 270 VPMRVISNLAGAVGVEAEGTVADGKLVTAASWPDLAEFIAHPVDLLG 130 P+ + AGA + E V +LVT+ + DL F + LLG Sbjct: 125 KPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLG 171
>PYRC_HALSA (Q9HMH9) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 422 Score = 28.5 bits (62), Expect = 8.7 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Frame = +1 Query: 172 RPARRRHELPVGDRSFGLHAHRAGEVGDHPHGHPARAPLALEEPRRGEDEVPLVDAGDHL 351 R A R ++ D + A +A ++ D P G P E +PL+ H Sbjct: 279 RLADGRIDVVATDHAPHTRAEKAADIWDAPSGVPGV-----------ETALPLLLGAAHR 327 Query: 352 PLGGELRHQRHRLL--------FGHQQLRRAAAGHDHALVVVDVD 462 GEL ++R R + FG ++ AAG D LV+VD D Sbjct: 328 ---GELSYERVRDVTAANPADVFGLERKGHIAAGRDADLVLVDPD 369
>PO2F1_CHICK (P15143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 739 Score = 28.5 bits (62), Expect = 8.7 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +2 Query: 197 FPSATVPSASTPT-APARLEITLMGTPLAHLLPLRSPAAARTRCPWSMLATTFPLAANFA 373 FPS T A+TP+ + TL P+ LPL SPA + T+ A + Sbjct: 450 FPSPTSLVATTPSLVTSSAATTLTVNPV---LPLTSPAVTSLSVTGTTETTSNNTATVIS 506 Query: 374 TSATASCLVTSSS 412 T+ AS VTS S Sbjct: 507 TAPPASSAVTSPS 519 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,663,794 Number of Sequences: 219361 Number of extensions: 999171 Number of successful extensions: 3971 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3943 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
