ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S22A3_RAT (O88446) Organic cation transporter 3 (Solute carrier ... 30 3.8
2S22A3_MOUSE (Q9WTW5) Organic cation transporter 3 (Solute carrie... 30 3.8
3KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like ... 30 3.8
4GUAA_CHLMU (Q9PKM3) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 3.8
5GUAA_CHLCV (Q822V6) GMP synthase [glutamine-hydrolyzing] (EC 6.3... 30 3.8
6KLOTB_MOUSE (Q99N32) Beta klotho (BetaKlotho) (Klotho beta-like ... 29 4.9

>S22A3_RAT (O88446) Organic cation transporter 3 (Solute carrier family 22|
           member 3)
          Length = 551

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 229 TAEVLRCIHQPKA-WHGRGTEMHPPAEVDKPSHCHAY 336
           TA   RC   P+  W+    E+H PAE     HCH Y
Sbjct: 57  TALAERCAWSPEEEWNLTTPELHVPAERRGQGHCHRY 93



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>S22A3_MOUSE (Q9WTW5) Organic cation transporter 3 (Solute carrier family 22|
           member 3)
          Length = 551

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 229 TAEVLRCIHQPKA-WHGRGTEMHPPAEVDKPSHCHAY 336
           TA   RC   P+  W+    E+H PAE     HCH Y
Sbjct: 57  TALAERCAWSPEEEWNLTTPELHVPAERRGQGHCHRY 93



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>KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like protein)|
          Length = 1044

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 IHQPK--AWHGRGTEMHPPAEVDKPSHCHAYQSNMGIKHTTTYMSW 381
           IH P   AWHG GT MH P E    +  +    N+   H+  + ++
Sbjct: 239 IHNPYLVAWHGYGTGMHAPGEKGNLAAVYTVGHNLIKAHSKVWHNY 284



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>GUAA_CHLMU (Q9PKM3) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 512

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = -3

Query: 290 ISVPLPCQAFGWWMHLSTSAVPSFRKVPWSSLNSNHGVSCHS----EVPDLCRVVLPYNG 123
           ++V   C+ +G+ + L       F    W SL+      C S    E+P++CRVV   + 
Sbjct: 444 VAVKGDCRHYGYTIALRAVESTDFMTACWPSLSREFLNRCSSRIINEIPEVCRVVYDISD 503

Query: 122 LVPCII 105
             P  I
Sbjct: 504 KPPATI 509



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>GUAA_CHLCV (Q822V6) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 512

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = -3

Query: 290 ISVPLPCQAFGWWMHLSTSAVPSFRKVPWSSLNSNHGVSCHS----EVPDLCRVVLPYNG 123
           ++V   C+ +G+ + L       F    W SL+      C S    E+P++CRVV   + 
Sbjct: 444 VAVKGDCRHYGYTIALRAIESTDFMTACWPSLSREFLNRCSSRIINEIPEVCRVVYDISD 503

Query: 122 LVPCII 105
             P  I
Sbjct: 504 KPPATI 509



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>KLOTB_MOUSE (Q99N32) Beta klotho (BetaKlotho) (Klotho beta-like protein)|
          Length = 1043

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 IHQPK--AWHGRGTEMHPPAEVDKPSHCHAYQSNMGIKHTTTYMSW 381
           IH P   AWHG GT MH P E    +  +    N+   H+  + ++
Sbjct: 239 IHNPYLVAWHGFGTGMHAPGEKGNLTAVYTVGHNLIKAHSKVWHNY 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,407,305
Number of Sequences: 219361
Number of extensions: 1315238
Number of successful extensions: 3111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3099
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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