>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2|
           (Retina-derived POU-domain factor 1) (RPF-1)
          Length = 684

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 425 LKQQTAQFYHQAPPPSIGRAPRHKTSSRAQDMM*HLSERPPQ 300
           L+QQ  Q   Q PPPS  + P+    + +Q     L   PPQ
Sbjct: 178 LQQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQ 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,817,774
Number of Sequences: 219361
Number of extensions: 1161715
Number of successful extensions: 2995
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2994
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)