ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y4BM_RHISN (P55380) Putative insertion sequence ATP-binding prot... 27 8.8

>Y4BM_RHISN (P55380) Putative insertion sequence ATP-binding protein|
           y4bM/y4kI/y4tA
          Length = 263

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
 Frame = -2

Query: 275 RRHT----DGRWLRSGTKGLISSGHS*TYKSWSSIA 180
           RR+T     G+WL +  +GLI +GH+ T KSW + A
Sbjct: 90  RRNTMALAQGQWL-TAHEGLIITGHTGTGKSWLACA 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,291,505
Number of Sequences: 219361
Number of extensions: 635699
Number of successful extensions: 1012
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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