ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 622 bits (314), Expect = e-175 Identities = 341/350 (97%) Strand = Plus / Minus Query: 2 gaaaagtaacacaatacaccttgcgagacccgaaccgatccatgaccagcggacggacga 61 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2858 gaaaagtaacacaatacaccttgcgagacacgaaccgatccatgaccagcggacggacga 2799 Query: 62 ctaccgaaagaaggaaacaaagaccatgctcagctcaaatggaaaccctgttggggatgc 121 ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 2798 ctaccgaaagaaggaaacaaagaccatgctcagctcagatggagacgctgttggggatgc 2739 Query: 122 ccatgggggtgagccccagcgccttctccccgttggcgtccgacgtgttggggtacagca 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2738 ccatggcggtgagccccagcgccttctccccgttggcgtccgacgtgttggggtacagca 2679 Query: 182 gcatgtagggcattttcacgggcccgttccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2678 gcatgtagggcatcttcacgggcccgttccggttcttgagcgccgggtccttgttcatgt 2619 Query: 242 cgaggatccgtttttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcg 301 |||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2618 cgaggatccgcttctcgatctccaccagccggctgccgaacctcttgaacgcctcgagcg 2559 Query: 302 ccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggtacacc 351 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2558 ccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggtacacc 2509
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 2433 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 2374 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 2373 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 2314 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 2313 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 2254 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 2253 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2207
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 2912 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 2853 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 2852 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 2793 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 2792 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 2733 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 2732 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2686
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 65803 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 65744 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 65743 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 65684 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 65683 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 65624 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 65623 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 65577 Score = 105 bits (53), Expect = 9e-20 Identities = 86/97 (88%) Strand = Plus / Minus Query: 255 ttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccga 314 ||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||| Sbjct: 47081 ttcgatctccaccagccggtcgctgaaccgccggaacgcctccagcgccctggcgtccga 47022 Query: 315 cgtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 47021 cgtccacgccggcgtgtcgcgctgcccgaggtacacc 46985 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 6027 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 5968 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 5967 cactctggcgtgtcacgctgccc 5945 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 6076 ccggttcttgagcagggggtccttgttcatgt 6045
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 27821673 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 27821614 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 27821613 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 27821554 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 27821553 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 27821494 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 27821493 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 27821447 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||||||||||||| ||| || || | ||||||||| |||||| |||||||| Sbjct: 30026322 gggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaaccgc 30026263 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 30026262 ttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctgtccgagg 30026203 Query: 346 tacacc 351 |||||| Sbjct: 30026202 tacacc 30026197 Score = 105 bits (53), Expect = 9e-20 Identities = 86/97 (88%) Strand = Plus / Minus Query: 255 ttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccga 314 ||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||| Sbjct: 27802951 ttcgatctccaccagccggtcgctgaaccgccggaacgcctccagcgccctggcgtccga 27802892 Query: 315 cgtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 27802891 cgtccacgccggcgtgtcgcgctgcccgaggtacacc 27802855 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 27761898 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 27761839 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 27761838 cactctggcgtgtcacgctgccc 27761816 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 27761947 ccggttcttgagcagggggtccttgttcatgt 27761916
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 27912997 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 27912938 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 27912937 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 27912878 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 27912877 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 27912818 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 27912817 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 27912771 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||||||||||||| ||| || || | ||||||||| |||||| |||||||| Sbjct: 30117744 gggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaaccgc 30117685 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 30117684 ttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctgtccgagg 30117625 Query: 346 tacacc 351 |||||| Sbjct: 30117624 tacacc 30117619 Score = 105 bits (53), Expect = 9e-20 Identities = 86/97 (88%) Strand = Plus / Minus Query: 255 ttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccga 314 ||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||| Sbjct: 27894275 ttcgatctccaccagccggtcgctgaaccgccggaacgcctccagcgccctggcgtccga 27894216 Query: 315 cgtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 27894215 cgtccacgccggcgtgtcgcgctgcccgaggtacacc 27894179 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 27853221 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 27853162 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 27853161 cactctggcgtgtcacgctgccc 27853139 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 27853270 ccggttcttgagcagggggtccttgttcatgt 27853239
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 1319 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 1260 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 1259 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 1200 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 1199 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 1140 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 1139 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 1093
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 2584 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 2525 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 2524 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 2465 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 2464 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 2405 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 2404 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2358
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 2914 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 2855 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 2854 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 2795 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 2794 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 2735 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 2734 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2688
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 236 bits (119), Expect = 4e-59 Identities = 200/227 (88%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 1484 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 1425 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 1424 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 1365 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||||||| |||||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 1364 ttgccgttcatgtccttgatccggttctcgatatccaccagccggctgccgaacctcttg 1305 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 1304 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 1258
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 220 bits (111), Expect = 2e-54 Identities = 198/227 (87%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 ||||||||||||||||||| ||||||||| | |||||||| | || | ||||||||| Sbjct: 2906 ctgttggggatgcccatggcggtgagcccttggcccttctccttggtgacatccgacgtg 2847 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| | Sbjct: 2846 ttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagcgccgag 2787 Query: 229 tccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaaccttttg 288 | ||||| ||| |||||| || ||||| ||||||||||||||||||||||| || Sbjct: 2786 ttgccgttcacgtccttgatccggttctcgatatccaccagccggctgccgaacctcctg 2727 Query: 289 aacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 ||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 2726 aacgcgtccagcgccttggcgtccgacgtccactccggcgtgtcgcg 2680
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 129 bits (65), Expect = 7e-27 Identities = 178/213 (83%), Gaps = 2/213 (0%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 |||||||| |||||||||| ||||||||| ||||||| ||| || | ||||||||| Sbjct: 354 ctgttgggaatgcccatggcagtgagcccctcgcccttctcgccggtgacatccgacgtg 295 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgccggg 228 ||||| |||||||||||||| ||||| | ||| ||||| ||||||||||| | || |||| Sbjct: 294 ttgggatacagcagcatgtacggcatctccaccggccccttccggttcttcaacgtcggg 235 Query: 229 tccttgttcat-gtcgaggatccgtttttcgatctccaccagccggctgccgaacctttt 287 | |||||| ||| | ||||| || |||||||||||||||||||| ||||||||| | Sbjct: 234 ctgtcgttcatcgtcctg-atccgcttctcgatctccaccagccggcttccgaaccttct 176 Query: 288 gaacgcctcgagcgccttggcgtccgacgtcca 320 |||||| || |||||| |||||||||||||||| Sbjct: 175 gaacgcgtccagcgccctggcgtccgacgtcca 143
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||||||||||||| ||| || || | ||||||||| |||||| |||||||| Sbjct: 2486 gggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaaccgc 2427 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2426 ttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctgtccgagg 2367 Query: 346 tacacc 351 |||||| Sbjct: 2366 tacacc 2361
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||||||||||||| ||| || || | ||||||||| |||||| |||||||| Sbjct: 2568 gggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaaccgc 2509 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2508 ttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctgtccgagg 2449 Query: 346 tacacc 351 |||||| Sbjct: 2448 tacacc 2443
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Plus Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||||||||||||| ||| || || | ||||||||| |||||| |||||||| Sbjct: 81429 gggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaaccgc 81488 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 81489 ttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctgtccgagg 81548 Query: 346 tacacc 351 |||||| Sbjct: 81549 tacacc 81554
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 115 bits (58), Expect = 1e-22 Identities = 109/126 (86%) Strand = Plus / Minus Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||||||||||||| ||| || || | ||||||||| |||||| |||||||| Sbjct: 2601 gggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaaccgc 2542 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2541 ttgaacgcctccagcgccttggcgtccgacgtccactccggcgtgtcgcgctgtccgagg 2482 Query: 346 tacacc 351 |||||| Sbjct: 2481 tacacc 2476
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 105 bits (53), Expect = 9e-20 Identities = 86/97 (88%) Strand = Plus / Minus Query: 255 ttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccga 314 ||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||| Sbjct: 2445 ttcgatctccaccagccggtcgctgaaccgccggaacgcctccagcgccctggcgtccga 2386 Query: 315 cgtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 2385 cgtccacgccggcgtgtcgcgctgcccgaggtacacc 2349
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 105 bits (53), Expect = 9e-20 Identities = 86/97 (88%) Strand = Plus / Plus Query: 255 ttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccga 314 ||||||||||||||||||| || ||||| ||||||||| |||||| |||||||||| Sbjct: 10942 ttcgatctccaccagccggtcgctgaaccgccggaacgcctccagcgccctggcgtccga 11001 Query: 315 cgtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||| ||||||||||||||||||| ||||||||| Sbjct: 11002 cgtccacgccggcgtgtcgcgctgcccgaggtacacc 11038 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 51996 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 52055 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 52056 cactctggcgtgtcacgctgccc 52078 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 51947 ccggttcttgagcagggggtccttgttcatgt 51978
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 99.6 bits (50), Expect = 6e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 109 ctgttggggatgcccatgggggtgagccccagcgccttctccccgttggcgtccgacgtg 168 |||||||| |||||||||| || |||||| |||||||| ||| | ||||||||||| Sbjct: 2887 ctgttgggaatgcccatggcagtaagcccctcggccttctcgccggtaacgtccgacgtg 2828 Query: 169 ttggggtacagcagcatgtagggcattttcacgggcccgttccggttctt 218 |||||||||||||||||||| ||||||| ||| ||||| ||||||||||| Sbjct: 2827 ttggggtacagcagcatgtacggcatttccacaggccccttccggttctt 2778 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 246 gatccgtttttcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgcctt 305 |||||| || || |||| |||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 2750 gatccgattctcaatctgcaccagccggctcccgaatcttttgaacgcatccagcgcctt 2691 Query: 306 ggcgtccgacgtcca 320 |||||| |||||||| Sbjct: 2690 ggcgtctgacgtcca 2676
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 97.6 bits (49), Expect = 2e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 287 tgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggt 346 |||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 718 tgaacgcctcctgcgccttggcgtccgacgtccacgccggcgtgtcgtgctgccccaggt 659 Query: 347 acacc 351 ||||| Sbjct: 658 acacc 654 Score = 46.1 bits (23), Expect = 0.075 Identities = 62/75 (82%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgcc 225 ||||||||||| |||||||||||||| | || | |||||| | |||||||||||| | Sbjct: 839 gtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttgagccgc 780 Query: 226 gggtccttgttcatg 240 |||||| ||||||| Sbjct: 779 gggtccccgttcatg 765
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 607 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 548 Query: 348 cacc 351 |||| Sbjct: 547 cacc 544 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 729 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 674
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 95.6 bits (48), Expect = 9e-17 Identities = 60/64 (93%) Strand = Plus / Minus Query: 288 gaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccaggta 347 ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 602 gaacgcctcctgcgccttggcgtccgacgtccactccggcgtgtcgcgctggccgaggta 543 Query: 348 cacc 351 |||| Sbjct: 542 cacc 539 Score = 40.1 bits (20), Expect = 4.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| |||||| ||||||| | || | |||||||| ||||||||||| Sbjct: 724 gtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 277 ccgaaccttttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgc 336 ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||| || Sbjct: 2480 ccgaaccgcttgaacgcctccagcgccttggcgtccgacgtccacgccggcgtgtcgtgc 2421 Query: 337 tgccccaggta 347 || |||||||| Sbjct: 2420 tggcccaggta 2410
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 91.7 bits (46), Expect = 1e-15 Identities = 80/92 (86%) Strand = Plus / Plus Query: 256 tcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgac 315 ||||||||||||||||| | ||||| |||||| |||| || ||||||| |||||| Sbjct: 148 tcgatctccaccagccgctcrctgaaccgcttgaacacctccagggccttggggtccgag 207 Query: 316 gtccactccggcgtgtcgcgctgccccaggta 347 |||||||||||||||||||||||||||||||| Sbjct: 208 gtccactccggcgtgtcgcgctgccccaggta 239
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 87.7 bits (44), Expect = 2e-14 Identities = 149/184 (80%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgcc 225 ||||||||||| |||||||||||||| | || | || ||||| |||||||||||| || Sbjct: 1019 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 960 Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||| | ||||||| | | | | | |||||||||||||||||| || ||||| Sbjct: 959 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 900 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 |||||| |||| || ||||| | |||||| ||||||||||||||||| |||||||| ||| Sbjct: 899 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgcccgagg 840 Query: 346 taca 349 |||| Sbjct: 839 taca 836
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 87.7 bits (44), Expect = 2e-14 Identities = 149/184 (80%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgagcgcc 225 ||||||||||| |||||||||||||| | || | || ||||| |||||||||||| || Sbjct: 2590 gtgttggggtagagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 2531 Query: 226 gggtccttgttcatgtcgaggatccgtttttcgatctccaccagccggctgccgaacctt 285 ||||| | ||||||| | | | | | |||||||||||||||||| || ||||| Sbjct: 2530 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 2471 Query: 286 ttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctgccccagg 345 |||||| |||| || ||||| | |||||| ||||||||||||||||| |||||||| ||| Sbjct: 2470 ttgaacacctccagggcctttgggtccgaggtccactccggcgtgtcccgctgcccgagg 2411 Query: 346 taca 349 |||| Sbjct: 2410 taca 2407
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 79.8 bits (40), Expect = 5e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 276 gccgaaccttttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcg 335 |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 2445 gccgaaccgcttgaacgcctcctgcgccttggcgtccgacgtccactccttggtgtcgcg 2386 Query: 336 ctgccccaggtacacc 351 ||| || ||||||||| Sbjct: 2385 ctggccgaggtacacc 2370
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 71.9 bits (36), Expect = 1e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 256 tcgatctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgac 315 ||||||||||| ||||| || ||||| |||||| |||| || ||||||| |||||| Sbjct: 596 tcgatctccactagccgctcgctgaaccgcttgaacacctccagggccttggggtccgag 537 Query: 316 gtccactccggcgtgtcgcgctgccccaggta 347 ||||||||||||||||| |||||||| ||||| Sbjct: 536 gtccactccggcgtgtcacgctgcccgaggta 505
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 2432 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 2373 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 2372 cactctggcgtgtcacgctgccc 2350 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 2481 ccggttcttgagcagggggtccttgttcatgt 2450
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 309 gtccgacgtccactccggcgtgtcgcgctgccccaggtacacc 351 |||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 11576458 gtccaacgtccactccggcgtgtcgcgctggccgaggtacacc 11576500
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 309 gtccgacgtccactccggcgtgtcgcgctgccccaggtacacc 351 |||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 22747 gtccaacgtccactccggcgtgtcgcgctggccgaggtacacc 22789
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 2498 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 2439 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 2438 cactctggcgtgtcacgctgccc 2416 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 2547 ccggttcttgagcagggggtccttgttcatgt 2516
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 259 atctccaccagccggctgccgaaccttttgaacgcctcgagcgccttggcgtccgacgtc 318 |||||||||||| | |||| |||||| ||||| || || || ||||||| ||| || ||| Sbjct: 2506 atctccaccagctgcctgctgaacctcttgaatgcttccagtgccttggggtctgatgtc 2447 Query: 319 cactccggcgtgtcgcgctgccc 341 ||||| |||||||| |||||||| Sbjct: 2446 cactctggcgtgtcacgctgccc 2424 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 210 ccggttcttgagcgccgggtccttgttcatgt 241 ||||||||||||| |||||||||||||||| Sbjct: 2555 ccggttcttgagcagggggtccttgttcatgt 2524
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 279 gaaccttttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 338 |||||| ||||||||| | |||||| |||||| || |||||||| || ||||||||||| Sbjct: 4482 gaacctcttgaacgccgccagcgcccgggcgtcggaggtccactcgggggtgtcgcgctg 4423 Query: 339 ccccaggtacacc 351 || ||||||||| Sbjct: 4422 gccgaggtacacc 4410
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 279 gaaccttttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 338 |||||| ||||||||| | |||||| |||||| || |||||||| || ||||||||||| Sbjct: 2415 gaacctcttgaacgccgccagcgcccgggcgtcggaggtccactcgggggtgtcgcgctg 2356 Query: 339 ccccaggtacacc 351 || ||||||||| Sbjct: 2355 gccgaggtacacc 2343
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 58.0 bits (29), Expect = 2e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 279 gaaccttttgaacgcctcgagcgccttggcgtccgacgtccactccggcgtgtcgcgctg 338 |||||| ||||||||| | |||||| |||||| || |||||||| || ||||||||||| Sbjct: 1884 gaacctcttgaacgccgccagcgcccgggcgtcggaggtccactcgggggtgtcgcgctg 1825 Query: 339 ccccaggtacacc 351 || ||||||||| Sbjct: 1824 gccgaggtacacc 1812 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtaggg 191 ||||||||||| |||||||||||||| Sbjct: 1997 gtgttggggtagagcagcatgtaggg 1972
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 gtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||||||||||||||||||| || ||||||||| Sbjct: 1893105 gtccactccggcgtgtcgcgctggccgaggtacacc 1893140
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 gtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||||||||||||||||||| || ||||||||| Sbjct: 21885 gtccactccggcgtgtcgcgctggccgaggtacacc 21920
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 56.0 bits (28), Expect = 8e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 316 gtccactccggcgtgtcgcgctgccccaggtacacc 351 ||||||||||||||||||||||| || ||||||||| Sbjct: 93583 gtccactccggcgtgtcgcgctggccgaggtacacc 93618
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 48.1 bits (24), Expect = 0.019 Identities = 48/56 (85%) Strand = Plus / Minus Query: 166 gtgttggggtacagcagcatgtagggcattttcacgggcccgttccggttcttgag 221 ||||||||||| || ||||||||||| | ||| | ||||| |||||||||||||| Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431
>gb|AY098518.1| Ananas comosus lipoxygenase III mRNA, partial cds Length = 524 Score = 46.1 bits (23), Expect = 0.075 Identities = 23/23 (100%) Strand = Plus / Minus Query: 316 gtccactccggcgtgtcgcgctg 338 ||||||||||||||||||||||| Sbjct: 307 gtccactccggcgtgtcgcgctg 285
>gb|AY098520.1| Ananas comosus lipoxygenase I mRNA, partial cds Length = 1143 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 185 tgtagggcattttcacgggcccgttccggttctt 218 |||||||||| ||||| || |||||||||||||| Sbjct: 930 tgtagggcatcttcaccgggccgttccggttctt 897
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 44.1 bits (22), Expect = 0.30 Identities = 31/34 (91%) Strand = Plus / Minus Query: 92 cagctcaaatggaaaccctgttggggatgcccat 125 ||||||||||||| | ||||||||||||||||| Sbjct: 2920 cagctcaaatggagatgctgttggggatgcccat 2887
>ref|XM_591335.2| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 3 (LOC513625), mRNA Length = 5895 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 2820 gatctccaccagccggctgcc 2800
>ref|XM_879429.1| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 1, transcript variant 8 (LOC534839), mRNA Length = 7417 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 3101 gatctccaccagccggctgcc 3081
>ref|XM_879405.1| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 1, transcript variant 7 (LOC534839), mRNA Length = 7543 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 3227 gatctccaccagccggctgcc 3207
>ref|XM_879377.1| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 1, transcript variant 6 (LOC534839), mRNA Length = 7390 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 3101 gatctccaccagccggctgcc 3081
>ref|XM_879350.1| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 1, transcript variant 5 (LOC534839), mRNA Length = 7507 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 3128 gatctccaccagccggctgcc 3108
>ref|XM_879253.1| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 1, transcript variant 2 (LOC534839), mRNA Length = 4851 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 3101 gatctccaccagccggctgcc 3081
>ref|XM_614747.2| PREDICTED: Bos taurus similar to signal-induced proliferation-associated 1 like 1, transcript variant 1 (LOC534839), mRNA Length = 7480 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gatctccaccagccggctgcc 278 ||||||||||||||||||||| Sbjct: 3101 gatctccaccagccggctgcc 3081
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccgggtccttgttcatgtcga 244 ||||||||||||||||||||| Sbjct: 2460096 ccgggtccttgttcatgtcga 2460116
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccgggtccttgttcatgtcga 244 ||||||||||||||||||||| Sbjct: 3093383 ccgggtccttgttcatgtcga 3093403
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence Length = 188519 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gggatgcccatgggggtgagc 135 ||||||||||||||||||||| Sbjct: 131648 gggatgcccatgggggtgagc 131628
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccgggtccttgttcatgtcga 244 ||||||||||||||||||||| Sbjct: 640077 ccgggtccttgttcatgtcga 640097
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccgggtccttgttcatgtcga 244 ||||||||||||||||||||| Sbjct: 2823461 ccgggtccttgttcatgtcga 2823481
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 agctcaaatggaaaccctgttggggatgcccat 125 |||||||||||| | ||||||||||||||||| Sbjct: 22970463 agctcaaatggagatgctgttggggatgcccat 22970431
>dbj|AP006462.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-813O18, complete sequence Length = 98815 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gggatgcccatgggggtgagc 135 ||||||||||||||||||||| Sbjct: 60937 gggatgcccatgggggtgagc 60957
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 ccgggtccttgttcatgtcga 244 ||||||||||||||||||||| Sbjct: 2368842 ccgggtccttgttcatgtcga 2368822
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 agctcaaatggaaaccctgttggggatgcccat 125 |||||||||||| | ||||||||||||||||| Sbjct: 22898654 agctcaaatggagatgctgttggggatgcccat 22898622
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 93 agctcaaatggaaaccctgttggggatgcccat 125 |||||||||||| | ||||||||||||||||| Sbjct: 79740 agctcaaatggagatgctgttggggatgcccat 79708
>gb|AY800241.1| Homo sapiens CHK2 checkpoint homolog (S. pombe) (CHEK2) gene, complete cds Length = 59395 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 agctcaaatggaaaccctgt 112 |||||||||||||||||||| Sbjct: 33155 agctcaaatggaaaccctgt 33136
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tccatgaccagcggacggac 59 |||||||||||||||||||| Sbjct: 181139 tccatgaccagcggacggac 181120
>ref|XM_657908.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5396.2), mRNA Length = 555 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ggcgtccgacgtgttggggt 175 |||||||||||||||||||| Sbjct: 102 ggcgtccgacgtgttggggt 83
>emb|AL121825.19|HSBA436C9 Human DNA sequence from clone RP11-436C9 on chromosome 22, complete sequence Length = 124337 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 agctcaaatggaaaccctgt 112 |||||||||||||||||||| Sbjct: 121320 agctcaaatggaaaccctgt 121339
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttgaacgcctcgagcgcctt 305 |||||||||||||||||||| Sbjct: 55374 ttgaacgcctcgagcgcctt 55393
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttgaacgcctcgagcgcctt 305 |||||||||||||||||||| Sbjct: 8324 ttgaacgcctcgagcgcctt 8343
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 ttgaacgcctcgagcgcctt 305 |||||||||||||||||||| Sbjct: 125459 ttgaacgcctcgagcgcctt 125478
>gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complete sequence Length = 172574 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tggggatgcccatgggggtg 132 |||||||||||||||||||| Sbjct: 25637 tggggatgcccatgggggtg 25618
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 tgaacgcctcgagcgccttggcgt 310 |||||||| ||||||||||||||| Sbjct: 2037143 tgaacgccacgagcgccttggcgt 2037120
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tcgagcgccttggcgtccga 314 |||||||||||||||||||| Sbjct: 2855116 tcgagcgccttggcgtccga 2855097 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,167,579 Number of Sequences: 3902068 Number of extensions: 2167579 Number of successful extensions: 51496 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50822 Number of HSP's gapped (non-prelim): 614 length of query: 351 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 329 effective length of database: 17,147,199,772 effective search space: 5641428724988 effective search space used: 5641428724988 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
