Clone Information

BLAST Search Result

Clone Name	rbaet95a11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ANX11_RABIT (P33477) Annexin A11 (Annexin XI) (Calcyclin-associa...	35	0.079
2	XG_HUMAN (P55808) Glycoprotein Xg precursor (Protein PBDX)	34	0.13
3	WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)	34	0.18
4	CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-...	34	0.18
5	ZXDB_HUMAN (P98169) Zinc finger X-linked protein ZXDB	33	0.23
6	ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associa...	33	0.23
7	DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like p...	33	0.30
8	SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-a...	33	0.39
9	IF2_CAUCR (Q9AC25) Translation initiation factor IF-2	33	0.39
10	SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-a...	32	0.51
11	CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displace...	32	0.51
12	FOR3_SCHPO (O94532) Formin-3	32	0.67
13	CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (...	32	0.87
14	TBX1_HUMAN (O43435) T-box transcription factor TBX1 (T-box prote...	32	0.87
15	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	32	0.87
16	COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor	32	0.87
17	MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protei...	31	1.1
18	CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)	31	1.1
19	BORG5_MOUSE (Q91W92) Cdc42 effector protein 1 (Binder of Rho GTP...	31	1.1
20	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	31	1.5
21	PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein...	31	1.5
22	YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I	31	1.5
23	BAB1_DROME (Q9W0K7) Protein bric-a-brac 1	31	1.5
24	ATG12_MAGGR (Q51P78) Autophagy-related protein 12 (Autophagy-rel...	31	1.5
25	PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein (...	30	1.9
26	PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein...	30	1.9
27	EVE_DROME (P06602) Segmentation protein even-skipped	30	1.9
28	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	30	1.9
29	LPP_CHICK (Q5F464) Lipoma-preferred partner homolog	30	1.9
30	PLS1_MOUSE (Q9JJ00) Phospholipid scramblase 1 (PL scramblase 1) ...	30	1.9
31	NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4...	30	2.5
32	PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1	30	2.5
33	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	30	3.3
34	CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog	30	3.3
35	ZIM10_MOUSE (Q6P1E1) Retinoic acid-induced protein 17 (PIAS-like...	30	3.3
36	DNBI_BHV2B (P12639) Major DNA-binding protein	30	3.3
37	FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leuc...	30	3.3
38	WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)	29	4.3
39	HXD11_MOUSE (P23813) Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5)	29	4.3
40	CLS_SHIFL (Q83RM8) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	29	4.3
41	CLS_ECOLI (P0A6H8) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	29	4.3
42	CLS_ECOL6 (P0A6H9) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	29	4.3
43	CLS_ECO57 (Q8XCC6) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	29	4.3
44	WBP2_MOUSE (P97765) WW domain-binding protein 2 (WBP-2)	29	5.7
45	MINC_BORPE (Q7VU93) Probable septum site-determining protein minC	29	5.7
46	MINC_BORPA (Q7W4S9) Probable septum site-determining protein minC	29	5.7
47	WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7...	29	5.7
48	HTRA2_MOUSE (Q9JIY5) Serine protease HTRA2, mitochondrial precur...	29	5.7
49	HTRA2_HUMAN (O43464) Serine protease HTRA2, mitochondrial precur...	29	5.7
50	ASCL1_MOUSE (Q02067) Achaete-scute homolog 1 (Mash-1)	29	5.7
51	YB9W_YEAST (P38352) F-box protein YBR280C	29	5.7
52	SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4	29	5.7
53	RCO1_NEUCR (P78706) Transcriptional repressor rco-1	29	5.7
54	CYCR_CHRVI (O82947) Photosynthetic reaction center cytochrome c ...	28	7.4
55	PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)	28	7.4
56	HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)	28	7.4
57	MVP_HUMAN (Q14764) Major vault protein (MVP) (Lung resistance-re...	28	7.4
58	SYGB_PSEAE (Q9I7B8) Glycyl-tRNA synthetase beta chain (EC 6.1.1....	28	7.4
59	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	28	7.4
60	EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear a...	28	7.4
61	GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-asso...	28	7.4
62	NKX61_RAT (O35762) Homeobox protein Nkx-6.1	28	9.7
63	NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1	28	9.7
64	CAUP_DROME (P54269) Homeobox protein caupolican	28	9.7
65	POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)	28	9.7
66	NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1	28	9.7
67	MINC_BORBR (Q7WGA5) Probable septum site-determining protein minC	28	9.7
68	Y2095_MYCTU (Q10704) Hypothetical protein Rv2095c/MT2156 precursor	28	9.7
69	OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)	28	9.7
70	MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated prote...	28	9.7
71	IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 s...	28	9.7
72	HOMEZ_HUMAN (Q8IX15) Homeobox and leucine zipper protein Homez (...	28	9.7
73	FTSK_BRUSU (Q8FYI0) DNA translocase ftsK	28	9.7
74	DNAA_AZOSE (Q5P4P0) Chromosomal replication initiator protein dnaA	28	9.7
75	NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1	28	9.7
76	DOS_MOUSE (Q66L44) Protein Dos (Downstream of Stk11 protein) (Fr...	28	9.7
77	TBP_DROVI (Q9NHP5) TATA-box-binding protein (TATA-box factor) (T...	28	9.7
78	OTX_STRPU (Q26417) Homeobox protein OTX (SPOTX)	28	9.7
79	CEBPA_HUMAN (P49715) CCAAT/enhancer-binding protein alpha (C/EBP...	28	9.7

>ANX11_RABIT (P33477) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)|
           (CAP-50)
          Length = 503

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 31/102 (30%), Positives = 41/102 (40%)
 Frame = -3

Query: 413 YQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PS 234
           Y   PGAP+ G    P PPP HQ  G +    PVT   P       PG   Q P    P 
Sbjct: 119 YPPFPGAPVPG---QPMPPPGHQPPGPYPGQLPVT--YPGQSPVPPPG---QQPMPSYPG 170

Query: 233 SNGGGGRSDFVAS*RRTQQGSVVTPSMHAWLRQNEAVKLLVK 108
             G G  +  V   +   +G++   S    LR  E ++  +K
Sbjct: 171 YPGSGTVTPAVPPVQFGNRGTITDASGFDPLRDAEVLRKAMK 212

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>XG_HUMAN (P55808) Glycoprotein Xg precursor (Protein PBDX)|
          Length = 180

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -3

Query: 416 PYQMIPGAPMFGGHAMPAPPPFHQ-AAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM* 240
           PY   P  P  GG+  P P P  Q   G    +G   ND      ++  G +P  PR   
Sbjct: 51  PYYPQPENPDSGGNIYPRPKPRPQPQPGNSGNSGGYFND-----VDRDDGRYPPRPRPRP 105

Query: 239 PSSNGGGGRSDF 204
           P+  GGGG S +
Sbjct: 106 PAGGGGGGYSSY 117

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>WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)|
          Length = 262

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 416 PYQMIPGAPMFGG---HAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQA 276
           P +  PG PM  G   +  P PPP+       + +GP     PAA+A+ A
Sbjct: 176 PPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVVSGPSAPPTPAAEAKAA 225

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>CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-containing|
           homolog)
          Length = 377

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGP 315
           AGAA  P   +PG P   G A  APPP   AAGA  ++GP
Sbjct: 5   AGAALAP--SLPGKPKPDGAAAAAPPPPPPAAGAKPSSGP 42

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>ZXDB_HUMAN (P98169) Zinc finger X-linked protein ZXDB|
          Length = 803

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -3

Query: 320 GPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGGRSDF 204
           GP      A+ A + PG     PRT  PS  GGGG  DF
Sbjct: 54  GPGRRREEASTASRGPGPSLLAPRTDQPSGGGGGGGDDF 92

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>ANX11_HUMAN (P50995) Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50)|
           (CAP-50) (56 kDa autoantigen)
          Length = 505

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 30/102 (29%), Positives = 40/102 (39%)
 Frame = -3

Query: 413 YQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PS 234
           Y   PGAP+ G    P PPP  Q  GA+    PVT   P       PG    VP    P 
Sbjct: 120 YPPYPGAPVPG---QPMPPPGQQPPGAYPGQPPVT--YPGQPPVPLPGQQQPVPSY--PG 172

Query: 233 SNGGGGRSDFVAS*RRTQQGSVVTPSMHAWLRQNEAVKLLVK 108
             G G  +  V   +   +G++        LR  E ++  +K
Sbjct: 173 YPGSGTVTPAVPPTQFGSRGTITDAPGFDPLRDAEVLRKAMK 214

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>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1|
            precursor (Down syndrome cell adhesion molecule 2)
          Length = 2053

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = -3

Query: 374  AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGGRSDFV 201
            AMPAPP    A  A  A GP   + P A +   P    + PR   P +  GG R   +
Sbjct: 1975 AMPAPP----AGTAPPAPGPTPAEPPTAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLL 2028

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>SF3A2_MOUSE (Q62203) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 475

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = -3

Query: 392 PMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           P   G   PAP    QA G H  A  +   AP    +  PG HP  P
Sbjct: 385 PQAPGVHPPAPAVHPQAPGVHPPAPGIHPQAPGVHPQPPPGVHPAAP 431



 Score = 32.7 bits (73), Expect = 0.39
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAE------QAPGDHPQVPRTM* 240
           P AP  G H  P+     QA G H  A  V   AP           QAPG HPQ P  + 
Sbjct: 370 PPAP--GVHPPPSAGVHPQAPGVHPPAPAVHPQAPGVHPPAPGIHPQAPGVHPQPPPGVH 427

Query: 239 PSSNG 225
           P++ G
Sbjct: 428 PAAPG 432



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = -3

Query: 392 PMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           P   G   PAP    QA G H    P  + A      Q PG HP  P
Sbjct: 399 PQAPGVHPPAPGIHPQAPGVHPQPPPGVHPAAPGVHPQPPGVHPSNP 445



 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
 Frame = -3

Query: 401 PGA-PMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           PG  P   G   PAP     A G H  A  V     A    QAPG HP  P
Sbjct: 345 PGVHPPTPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPPAP 395

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>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2|
          Length = 1009

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 25/61 (40%), Positives = 25/61 (40%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQV 255
           A AAQ   Q    A      A  APPP  QA  A   A PVT   P   A QAP    Q 
Sbjct: 124 ARAAQEAAQREAAAKAAAERAAAAPPPVAQAPAAPAPAAPVT---PPPAAPQAPRPVAQA 180

Query: 254 P 252
           P
Sbjct: 181 P 181

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>SF3A2_HUMAN (Q15428) Splicing factor 3A subunit 2 (Spliceosome-associated|
           protein 62) (SAP 62) (SF3a66)
          Length = 464

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAE------QAPGDHPQVP 252
           P AP  G H  P+     QA G H AA  V   AP           QAPG HPQ P
Sbjct: 359 PPAP--GVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPP 412



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 23/57 (40%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFH-QAAGAHMAAGPVTNDAPAAQAE------QAPGDHPQVP 252
           P AP  G H  PA P  H QA G H  A  +   AP    +       APG HPQ P
Sbjct: 374 PQAP--GVH--PAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPP 426



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/50 (38%), Positives = 20/50 (40%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           P AP   G   PAP     A G H  A  V   AP      + G HPQ P
Sbjct: 331 PPAP---GVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAP 377



 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/50 (40%), Positives = 20/50 (40%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           P AP   G   PAP     A G H  A  V     A    QAPG HP  P
Sbjct: 338 PPAP---GVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAP 384

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>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
            (CDP)
          Length = 1505

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 380  GHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSN 228
            G  +  P P    A A   A P   +  A  A  APG+ P  P +  P SN
Sbjct: 1393 GGPVEGPGPLPSPASATATAAPAAPEDAATSAAAAPGEGPAAPSSAPPPSN 1443

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>FOR3_SCHPO (O94532) Formin-3|
          Length = 1461

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
 Frame = -3

Query: 425 AQFPYQMIPGAPMFGGHAMPAPPPFHQAAG--------AHMAAGPVTNDAPAAQAEQAP 273
           A  P  + P AP+ GG   P PPP    AG          ++AG     APA QAE  P
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803

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>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)|
          Length = 1002

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = -3

Query: 416 PYQMIPGAPMFG--GHAMPAPPPFHQAAGAHMAAGPVTND----APAAQAEQAPGDHPQV 255
           P + +P  PM    G  MP PPP H   G HM   P+ ++     P       PG+H   
Sbjct: 268 PGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 326

Query: 254 P 252
           P
Sbjct: 327 P 327



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = -3

Query: 416 PYQMIPGAPMFG--GHAMPAPPPFHQAAGAHMAAGPVTND----APAAQAEQAPGDHPQV 255
           P + +P  PM    G  MP PPP H   G HM   P+ ++     P       PG+H   
Sbjct: 242 PGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 300

Query: 254 P 252
           P
Sbjct: 301 P 301



 Score = 31.6 bits (70), Expect = 0.87
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = -3

Query: 416 PYQMIPGAPMFG--GHAMPAPPPFHQAAGAHMAAGPVTND----APAAQAEQAPGDHPQV 255
           P + +P  PM    G  MP PPP H   G HM   P+ ++     P       PG+H   
Sbjct: 216 PGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 274

Query: 254 P 252
           P
Sbjct: 275 P 275



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -3

Query: 380 GHAMPAPPPFHQAAGAHMAAGPVTND----APAAQAEQAPGDHPQVP 252
           G  MP PPP H   G HM   P+ ++     P       PG+H   P
Sbjct: 204 GEHMP-PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -3

Query: 416 PYQMIPGAPMFG--GHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           P + +P  PM    G  MP PPP H   G HM   P+ ++         PG+H   P
Sbjct: 294 PGEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPPMHHE---------PGEHMPPP 340

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>TBX1_HUMAN (O43435) T-box transcription factor TBX1 (T-box protein 1)|
           (Testis-specific T-box protein)
          Length = 398

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
 Frame = -3

Query: 428 AAQFPYQMIPGAPMFGGHAMPAPPPFHQ--AAGAHMAAGPVTND-----APAAQAEQAPG 270
           A  FP    PGA  +G    P PPP +   AA A  A GP         APAA A  +  
Sbjct: 24  AGGFPGAASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPAAGAATSAA 83

Query: 269 DHPQVP 252
             P+ P
Sbjct: 84  AEPEGP 89

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>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = -3

Query: 407 MIPGAPMFGGHAMPAPPPFHQAA-GAHM-AAGPVTNDAPA----AQAEQAPGDHPQVP 252
           + PGAP     ++P  PP   AA GA+   AGP  +  PA       +  PG HP +P
Sbjct: 49  LAPGAPRAARGSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFHHHGQAQPGLHPPLP 106

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>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor|
          Length = 674

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = -3

Query: 404 IPGAPMFGGHAMPAPPPFHQAAGAHMAAGPV-TNDAPAAQAEQAPGDHPQVPRTM*PSSN 228
           +PGAP FG   +P         G     GPV    +P A+ EQ P  HP       PS N
Sbjct: 292 LPGAPGFGKPGLP---------GLKGQRGPVGLPGSPGAKGEQGPAGHPGEAGLPGPSGN 342

Query: 227 GG 222
            G
Sbjct: 343 MG 344

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>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa|
           protein)
          Length = 537

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAE-QAPGDHPQVPRTM*PS 234
           P AP     A  AP P H+AA AH    P     PAA AE  AP   P+ P+   PS
Sbjct: 89  PAAPA----AEHAPTPTHEAAPAHEEGPP-----PAAPAEAPAPEPEPEKPKEEPPS 136

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>CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)|
          Length = 911

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = -3

Query: 329 MAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGGRSDFVAS 195
           MA G    DAP+ ++  +PG  P+VPR + PS  GGGG +   A+
Sbjct: 1   MADGGGPKDAPSLRS--SPGPAPRVPRAVGPS--GGGGETPRTAA 41

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>BORG5_MOUSE (Q91W92) Cdc42 effector protein 1 (Binder of Rho GTPases 5)|
          Length = 409

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -3

Query: 374 AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAP-GDHPQVPRTM*PSSNG---GGGRSD 207
           ++PAP      +  H   G  +   PAA+A+ +P G+ PQVP  M    +G   G  R+ 
Sbjct: 280 SLPAPAAASSPSRGHFPNGVTSVLGPAAEAKPSPVGEGPQVPSNMTFDRHGASWGASRAS 339

Query: 206 FVAS 195
           + AS
Sbjct: 340 WGAS 343

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>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
 Frame = -3

Query: 377 HAMPAPPPFHQAA----GAHMAAGPVTNDA---PAAQAEQAPGDHPQVPRTM*PSSNGGG 219
           H  P  P    AA    G H+ +G     A   PAA AE APG  P+ P        GGG
Sbjct: 42  HLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGG 101

Query: 218 GRSDFVAS*RR 186
            +     S RR
Sbjct: 102 PQRPGPPSPRR 112

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>PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein|
           (PDCD6-interacting protein) (ALG-2-interacting protein
           1) (Hp95)
          Length = 868

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 431 GAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQ 279
           G  Q P  M      +G + MP PP +HQ+ G     GP     P  Q  Q
Sbjct: 811 GYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQAPYPGPQQPSYPFPQPPQ 861

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>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = -3

Query: 401  PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAP---AAQAEQAPGDHPQVPRTM*PSS 231
            P    F     PAPP     + A +++ P  N  P   +  A Q P   PQ    + P++
Sbjct: 1521 PSQSSFAHVPSPAPPAPQHPSAAALSSAPADNSMPHRSSPYAPQEPVQKPQAINNIAPAT 1580

Query: 230  NGGGGRS 210
            N G  +S
Sbjct: 1581 NLGTSQS 1587

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>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1|
          Length = 977

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 13/67 (19%)
 Frame = -3

Query: 377 HAMPAPPPFHQAAGAHMAAGPVTND----APAAQAEQA---------PGDHPQVPRTM*P 237
           HA PAP P   A  AH  A P  +      PAA    A         P   P++P    P
Sbjct: 406 HASPAPHPSQTAGSAHHPASPAGDSRFPLGPAAAMAAARELSGLGPGPSAEPRLPPPP-P 464

Query: 236 SSNGGGG 216
             +GGGG
Sbjct: 465 HHHGGGG 471

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>ATG12_MAGGR (Q51P78) Autophagy-related protein 12 (Autophagy-related|
           ubiquitin-like modifier ATG12)
          Length = 181

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = -3

Query: 368 PAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM 243
           P PP     A A  +A P+ +DAP A         P +P TM
Sbjct: 24  PPPPSSSSTAPASSSATPIPDDAPDADDNDGSPPSPDLPLTM 65

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>PDC6I_RAT (Q9QZA2) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein 1) (Fragment)
          Length = 401

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 431 GAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQ 279
           G  Q P  M      +G + MP PP +HQ+ G     GP     P  Q  Q
Sbjct: 344 GYCQMPMPMGYNPYTYGQYNMPYPPVYHQSPGQAPYPGPQQPTYPFPQPPQ 394

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>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein X) (ALG-2-interacting protein
           1) (E2F1-inducible protein) (Eig2)
          Length = 869

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 431 GAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQ 279
           G  Q P  M      +G + MP PP +HQ+ G     GP     P  Q  Q
Sbjct: 812 GYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQAPYPGPQQPTYPFPQPPQ 862

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>EVE_DROME (P06602) Segmentation protein even-skipped|
          Length = 376

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
 Frame = -3

Query: 428 AAQFPYQMIPGAPMFGGHAMPAP--------PPFHQAAGAHMAAGPVTNDAPAAQAEQAP 273
           A  +PY  +   P F    + A         PP+  AA A  AA       P       P
Sbjct: 131 AVAWPYAAVYSDPAFAASILQAAANSVGMPYPPYAPAAAAAAAAAAAVATNPMMATGMPP 190

Query: 272 GDHPQVPRTM*PSSNGGGG 216
              PQ+P    P  +G  G
Sbjct: 191 MGMPQMPTMQMPGHSGHAG 209

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 25/89 (28%), Positives = 30/89 (33%), Gaps = 14/89 (15%)
 Frame = -3

Query: 431 GAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAG-------AHMAAGPVTNDAPAAQAEQAP 273
           G  Q   Q  P  PM  G     PPP H   G       +HM  GP+    P       P
Sbjct: 322 GGPQQQQQQPPQPPMNNGQM--GPPPLHSPLGNGPTGHGSHMPGGPIPGPGPGPGGLVGP 379

Query: 272 -------GDHPQVPRTM*PSSNGGGGRSD 207
                  G++P          N GGG S+
Sbjct: 380 GGISPAHGNNPGGSGNNMLGGNPGGGNSN 408

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>LPP_CHICK (Q5F464) Lipoma-preferred partner homolog|
          Length = 604

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDA--PAAQAEQAPGDHPQVPRTM*PSSN 228
           PG P     A PA PP  Q  G+    GP    A  PA  +E + G  PQ  R   P   
Sbjct: 247 PGQPYA---APPARPPGAQQYGSPQPRGPDYGYAPPPARPSEPSYGYAPQQGRYQDPYYG 303

Query: 227 GGGGRS 210
           G GGR+
Sbjct: 304 GYGGRN 309

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>PLS1_MOUSE (Q9JJ00) Phospholipid scramblase 1 (PL scramblase 1)|
           (Ca(2+)-dependent phospholipid scramblase 1)
           (Transplantability-associated protein 1) (TRA1) (NOR1)
          Length = 328

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDH--PQVPRTM*PSSN 228
           PG  M  G+  P PP   Q    H AA P+    P A  +  PG +  PQ    + P   
Sbjct: 13  PGTYMPAGYPPPYPPAAFQGPSDH-AAYPI----PQAGYQGPPGPYPGPQPGYPVPPGGY 67

Query: 227 GGGGRSDF 204
            GGG S F
Sbjct: 68  AGGGPSGF 75

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>NMDE4_HUMAN (O15399) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D) (EB11)
          Length = 1336

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/56 (35%), Positives = 25/56 (44%)
 Frame = -3

Query: 374  AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGGRSD 207
            A P PPP    + A+ A GP    AP    E+A  D  +  RT      GG G +D
Sbjct: 906  AKPPPPPQPLPSPAYPAPGPAPGPAPFVPRERASVDRWR--RTKGAGPPGGAGLAD 959

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>PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1|
          Length = 796

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
 Frame = -3

Query: 422 QFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQA----EQAPGDHPQV 255
           QFP Q   G P     A P PPP        M  GPV     A+ +       P   P V
Sbjct: 178 QFPMQPASGQPGPSQFAPPPPPPGVNVNMNQMPMGPVQVPVQASPSPIGMSNTPSPGPVV 237

Query: 254 PRTM*PSSNGGGGRSDFVAS*RRTQQ 177
             T  P  +G   + D     +R  Q
Sbjct: 238 GATKMPLQSGRRSKRDLSPEEQRRLQ 263

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -3

Query: 431 GAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGP 315
           G A  PY    G    GG+  P PPPF  A G     GP
Sbjct: 697 GPAPGPYHRGRGGR--GGNEPPPPPPFRGARGGRSGGGP 733

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>CX017_MOUSE (Q8C3F2) Protein CXorf17 homolog|
          Length = 1091

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
 Frame = -3

Query: 416 PYQMIPGAPMF--GGHAMPAPPPFHQAAGAHM-AAGPVTNDAPA----AQAEQAPGDHPQ 258
           P  + PGAP    G   +P PP    A GA+   AGP  +  PA       +  PG HP 
Sbjct: 45  PAALAPGAPRITRGSAPLPPPPLPPAAFGAYSGGAGPSRHHHPAHHFHHHGQAPPGLHPP 104

Query: 257 VP 252
            P
Sbjct: 105 PP 106

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>ZIM10_MOUSE (Q6P1E1) Retinoic acid-induced protein 17 (PIAS-like protein Zimp10)|
          Length = 1072

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
 Frame = -3

Query: 434  AGAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQV 255
            AG++  P+  I         +  A PP H +        P  +  P    + APG+HP  
Sbjct: 956  AGSSDQPHPSIQQGLHVPHPSSQAGPPLHHSGA------PPPSQPPRQPPQAAPGNHPHS 1009

Query: 254  PRTM*PSS-----NGGGGRSD 207
              T  PSS      G  G SD
Sbjct: 1010 DLTFNPSSALEGQAGAQGASD 1030

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>DNBI_BHV2B (P12639) Major DNA-binding protein|
          Length = 1186

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = -3

Query: 359  PPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSN 228
            PP  QAA A    G    +A A      PGDHP    TM  S N
Sbjct: 920  PPNAQAAAAWAPRGGTELEAQARSVVANPGDHPGAWTTMFASCN 963

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>FXL19_MOUSE (Q6PB97) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = -3

Query: 398 GAPMFGGHAM----PAPPPFHQAAGAHMAAGPVTNDAPA--AQAEQAPGDHPQVPR 249
           GA + GG  +    P PPP  +  G  + AGP  +D P    + E+  G+ P  PR
Sbjct: 153 GANLGGGWKLTEEPPPPPPLPRRKGP-LPAGPTPDDVPGPPKRKEREGGNEPPTPR 207

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>WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)|
          Length = 261

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 416 PYQMIPGAPMFGG---HAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQA 276
           P +  PG PM  G   +  P PPP+       ++ GP     PAA+A+ A
Sbjct: 176 PPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVS-GPDVPSTPAAEAKAA 224

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>HXD11_MOUSE (P23813) Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5)|
          Length = 323

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
 Frame = -3

Query: 431 GAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVT-----NDAPAAQAEQAPGD 267
           G  QF Y+  PG P  G    PAP P  Q  GA     P         +P A+A   PG 
Sbjct: 162 GFDQF-YEAAPGPPFAGPQPQPAPAP-PQPEGAADKGDPKPGAGGGGGSPCAKA--TPGP 217

Query: 266 HPQVPRTM*PSSNGGGGRSD 207
            P+       ++ GGGG  +
Sbjct: 218 EPK------GAAEGGGGEGE 231

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>CLS_SHIFL (Q83RM8) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CL synthase)
          Length = 486

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 191 RRTQQGSVVTPSMHAWLRQNEAVKLLVKL*NGSRTAPASSLCQR 60
           RR ++   + PS   WL   +A K +    N S  AP   LC+R
Sbjct: 66  RRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCER 109

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>CLS_ECOLI (P0A6H8) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CL synthase)
          Length = 486

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 191 RRTQQGSVVTPSMHAWLRQNEAVKLLVKL*NGSRTAPASSLCQR 60
           RR ++   + PS   WL   +A K +    N S  AP   LC+R
Sbjct: 66  RRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCER 109

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>CLS_ECOL6 (P0A6H9) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CL synthase)
          Length = 486

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 191 RRTQQGSVVTPSMHAWLRQNEAVKLLVKL*NGSRTAPASSLCQR 60
           RR ++   + PS   WL   +A K +    N S  AP   LC+R
Sbjct: 66  RRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCER 109

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>CLS_ECO57 (Q8XCC6) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)|
           (CL synthase)
          Length = 486

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 191 RRTQQGSVVTPSMHAWLRQNEAVKLLVKL*NGSRTAPASSLCQR 60
           RR ++   + PS   WL   +A K +    N S  AP   LC+R
Sbjct: 66  RRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCER 109

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>WBP2_MOUSE (P97765) WW domain-binding protein 2 (WBP-2)|
          Length = 261

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -3

Query: 416 PYQMIPGAPMFGG---HAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQA 276
           P +  PG PM  G   +  P PPP+       ++ GP     PAA+A+ A
Sbjct: 176 PPEFYPGPPMMDGAMGYVQPPPPPYPGPMEPPVS-GPSAPATPAAEAKAA 224

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>MINC_BORPE (Q7VU93) Probable septum site-determining protein minC|
          Length = 292

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 374 AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQ 258
           A P P      A A   AGP  ++A   QA++AP  +P+
Sbjct: 120 ATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPE 158

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>MINC_BORPA (Q7W4S9) Probable septum site-determining protein minC|
          Length = 292

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 374 AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQ 258
           A P P      A A   AGP  ++A   QA++AP  +P+
Sbjct: 120 ATPVPSVPEATAEAAAKAGPQDDEADGEQADEAPAHNPE 158

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>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)|
           (Protein kinase with no lysine 1) (Protein kinase,
           lysine-deficient 1) (Kinase deficient protein)
          Length = 2382

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = -3

Query: 359 PPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQV---PRTM*PSSNGGGGRSDFVAS*R 189
           PP   A G    AGP  +  P++ ++  P   P +        P+ +G GG S       
Sbjct: 137 PPAAAAPGEQAVAGPAPSTVPSSTSKDRPVSQPSLVGSKEEPPPARSGSGGGSAKEPQEE 196

Query: 188 RTQQ 177
           R+QQ
Sbjct: 197 RSQQ 200

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>HTRA2_MOUSE (Q9JIY5) Serine protease HTRA2, mitochondrial precursor (EC|
           3.4.21.-) (High temperature requirement protein A2)
           (HtrA2) (Omi stress-regulated endoprotease) (Serine
           proteinase OMI)
          Length = 458

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 374 AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGG 219
           A+PAPPP    +  +  A  V   APA    +    HP   R + P SNG G
Sbjct: 134 AVPAPPPTSPRSQYNFIADVVEKTAPAVVYIEILDRHPFSGREV-PISNGSG 184

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>HTRA2_HUMAN (O43464) Serine protease HTRA2, mitochondrial precursor (EC|
           3.4.21.-) (High temperature requirement protein A2)
           (HtrA2) (Omi stress-regulated endoprotease) (Serine
           proteinase OMI)
          Length = 458

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -3

Query: 374 AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGG 219
           A+P+PPP    +  +  A  V   APA    +    HP + R + P SNG G
Sbjct: 134 AVPSPPPASPRSQYNFIADVVEKTAPAVVYIEILDRHPFLGREV-PISNGSG 184

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>ASCL1_MOUSE (Q02067) Achaete-scute homolog 1 (Mash-1)|
          Length = 231

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
 Frame = -3

Query: 383 GGHAMPAPP-PFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*P-------SSN 228
           G    P PP PF   A    A       A AA A+ A    PQ P    P       S  
Sbjct: 10  GAGQQPQPPQPFLPPAACFFATAAAAAAAAAAAAQSAQQQQPQAPPQQAPQLSPVADSQP 69

Query: 227 GGGGRSDFVAS*RRTQQGS 171
            GGG        +R +  S
Sbjct: 70  SGGGHKSAAKQDKRQRSSS 88



 Score = 28.1 bits (61), Expect = 9.7
 Identities = 23/75 (30%), Positives = 28/75 (37%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQV 255
           +GA Q P    P  P       PA   F  AA A  AA      A   Q +  P   PQ+
Sbjct: 9   SGAGQQPQPPQPFLP-------PAACFFATAAAAAAAAAAAAQSAQQQQPQAPPQQAPQL 61

Query: 254 PRTM*PSSNGGGGRS 210
                   +GGG +S
Sbjct: 62  SPVADSQPSGGGHKS 76

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>YB9W_YEAST (P38352) F-box protein YBR280C|
          Length = 637

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = -3

Query: 398 GAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PS 234
           G  M G H   A  P +     H     +T D+  A A    G H  VPRT  PS
Sbjct: 262 GRRMSGSHPSTAYEPGNATTAQH-----ITIDSGGAPAASPGGSHSGVPRTTMPS 311

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>SSBP4_HUMAN (Q9BWG4) Single-stranded DNA-binding protein 4|
          Length = 385

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
 Frame = -3

Query: 401 PGAPMFGGHAMPAPPPFHQAAGAHMAAGP-VTNDAPAAQAEQAPGDHPQVPRTM*PSSNG 225
           P APM G H  P   P           GP  T   P+      PG  P +P  M PS   
Sbjct: 135 PNAPMMGPHGQPFMSP-------RFPGGPRPTLRMPSQPPAGLPGSQPLLPGAMEPSPRA 187

Query: 224 GG 219
            G
Sbjct: 188 QG 189

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>RCO1_NEUCR (P78706) Transcriptional repressor rco-1|
          Length = 604

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 16/73 (21%)
 Frame = -3

Query: 383 GGHAM--PAPPPFHQAAGAHMAAGPVTNDAPAA--------------QAEQAPGDHPQVP 252
           GG A+  P PPP  Q   AHM A P     P                Q  Q PG+ P  P
Sbjct: 124 GGQALVPPPPPPQQQEQPAHMPAPPGLQGPPPPPPPPSQQPPFQQQYQGPQGPGNFPPQP 183

Query: 251 RTM*PSSNGGGGR 213
                S    G R
Sbjct: 184 PQSTASPGPAGKR 196

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>CYCR_CHRVI (O82947) Photosynthetic reaction center cytochrome c subunit|
           precursor
          Length = 383

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 392 PMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAE 282
           P++G       P  +++A A   A P T +APAA+AE
Sbjct: 317 PLYGAQMAKDYPALYESAPAE--AAPATEEAPAAEAE 351

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>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)|
          Length = 485

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 14/77 (18%)
 Frame = -3

Query: 392 PMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPA--AQAEQAPGDHPQV------------ 255
           P F G   P PPP      A     P    +PA      Q PG  P              
Sbjct: 4   PPFFGQGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQ 63

Query: 254 PRTM*PSSNGGGGRSDF 204
           PR    +S GGGG   F
Sbjct: 64  PRASAEASRGGGGAGAF 80

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>HXD8_HUMAN (P13378) Homeobox protein Hox-D8 (Hox-4E) (Hox-5.4)|
          Length = 290

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
 Frame = -3

Query: 428 AAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGP----VTNDAPAAQAEQAPGDHP 261
           AA FP+      P    H  P+PPP     G     G         +PAA  + AP   P
Sbjct: 58  AAGFPH----APPQAHAHPHPSPPPSGTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPP 113

Query: 260 QVPRTM*PSSNGG 222
             P    P   GG
Sbjct: 114 HPPPPPPPPPCGG 126

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>MVP_HUMAN (Q14764) Major vault protein (MVP) (Lung resistance-related|
           protein)
          Length = 892

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 356 PFHQAAGAHMAAGPVTNDA---PAAQAEQAPGDHPQVP 252
           P  Q  G  +A+GP   +     +AQA QAPGD+  VP
Sbjct: 852 PEGQPLGRRVASGPSPGEGISPQSAQAPQAPGDNHVVP 889

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>SYGB_PSEAE (Q9I7B8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)|
           (Glycine--tRNA ligase beta chain) (GlyRS)
          Length = 684

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = -2

Query: 201 SKLAAHAA-RLGGNSEHACMAAAKRSCKTPCETVKWLTDCSGIFPVSEDRTGYSVCWRGS 25
           S LAA+ A R+GGN+++A  A     C    E V       G FP  +   GY     G 
Sbjct: 364 SGLAAYIAERIGGNAQNASRAGILSKCDLATEMV-------GEFPEMQGIAGYYYATHGG 416

Query: 24  MDQD 13
             +D
Sbjct: 417 EAED 420

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 383 GGHAMPAPPPFHQAAGAHMAAGP 315
           GG+  P PPPF  A G     GP
Sbjct: 711 GGNEPPPPPPFRGARGGRSGGGP 733

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>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 11/61 (18%)
 Frame = -3

Query: 362 PPP-----FHQAAGA-----HMAAGPVTN-DAPAAQAEQAPGDHPQVPRTM*PSSNGGGG 216
           PPP     FH    A     H   GP    D P    EQ P D P    +  P   G GG
Sbjct: 398 PPPGRRPFFHPVGEADYFEYHQEGGPDGEPDVPPGAIEQGPADDPGEGPSTGPRGQGDGG 457

Query: 215 R 213
           R
Sbjct: 458 R 458

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>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated|
           scaffold protein (GRP1-associated scaffold protein)
           (Tamalin) (95 kDa postsynaptic density protein
           discs-large ZO-1 domain-containing protein) (PSD-95 PDZ
           domain-containing protein)
          Length = 394

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = -3

Query: 386 FGG---HAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGG 216
           FGG    A+P PPP  +A G   A  P +   PA +A  +        R   P   GGGG
Sbjct: 289 FGGAEPQALPPPPPPARAPGPGSAETPASVLCPAPRATLS---RSASVRCAGPGGGGGGG 345

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>NKX61_RAT (O35762) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPP---FHQAAGAHMAAG 318
           A AA  P  ++ G P F   + P PPP   F  +A A  A G
Sbjct: 148 AAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVG 189

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>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPP---FHQAAGAHMAAG 318
           A AA  P  ++ G P F   + P PPP   F  +A A  A G
Sbjct: 148 AAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVG 189

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>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
 Frame = -3

Query: 416 PYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQA----EQAPGDHPQVPR 249
           PY  IP A      AM    P   ++ +     P T+  PA Q     E  P   PQ P 
Sbjct: 547 PYSRIPTAYT---EAMGMHLPSSSSSSSSTGKLPPTHIHPAPQRVGFPEIQPDTPPQTPP 603

Query: 248 TM*PSSNGGGGRSDFVAS*RRTQQGSVVTPSMHA 147
           TM  +S+GG   S           GS  + SMH+
Sbjct: 604 TMKLNSSGGSSSS----------SGSSHSSSMHS 627

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>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1844

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -3

Query: 401 PGAPMFGGH----AMPAPPPFHQAAGAHMAAGPVTNDAPA 294
           P  P+ G H    ++PAPP  H    + +   P+TND  A
Sbjct: 704 PADPLMGSHLLHHSLPAPPT-HPLQSSQLLPAPLTNDPTA 742

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>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1|
          Length = 367

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPP---FHQAAGAHMAAG 318
           A AA  P  ++ G P F   + P PPP   F  +A A  A G
Sbjct: 147 AAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVG 188

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>MINC_BORBR (Q7WGA5) Probable septum site-determining protein minC|
          Length = 292

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 374 AMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQ 258
           A P P      A A   AGP  ++A   QA++AP  +P+
Sbjct: 120 ATPVPSVPEATAEAAAKAGPQDDEAYGEQADEAPAHNPE 158

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>Y2095_MYCTU (Q10704) Hypothetical protein Rv2095c/MT2156 precursor|
          Length = 316

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
 Frame = -3

Query: 347 QAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGGRSDFVAS*RRTQQGSV 168
           QAA + +A       A AA AEQAP + P          N      D+ A+   T    +
Sbjct: 109 QAARSAIAKIAAAAGAVAAVAEQAPTESPAAAAVRAAVRNSRALTIDYYAASHDTLTTRI 168

Query: 167 VTP----------SMHAWLRQNEAVKL 117
           V P           + AW R+ E V+L
Sbjct: 169 VDPIRVLLIGGHSYLEAWSREAEGVRL 195

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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 368 PAPPPFHQAAGAHMAAGPVTNDAPAAQAEQA-PGDHPQVPRTM*PSSNGGGGRS 210
           P PPP   A G   ++ P    +P+ Q  QA P  H ++       S+ GG  S
Sbjct: 440 PPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHS 493

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>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1|
           (Transducer of regulated cAMP response element-binding
           protein 1) (Transducer of CREB protein 1)
          Length = 634

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQV 255
           AG+ Q P Q  P  P       P PPP  QA       GP+   A   +  Q P     V
Sbjct: 358 AGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRLPPGGPLLPSASLTRGPQPPPLAVTV 417

Query: 254 PRTM 243
           P ++
Sbjct: 418 PSSL 421

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>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9|
           (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1
           homolog) (hPrt1)
          Length = 814

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
 Frame = -3

Query: 401 PGAPMFGGH---------AMPAPPP---FHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQ 258
           PGAP   G          A   P P      AA A  A+GP  + +P A AE+ PG H +
Sbjct: 40  PGAPEAAGTEASSEEVGIAEAGPEPEVRTEPAAEAEAASGPSESPSPPA-AEELPGSHAE 98

Query: 257 VP 252
            P
Sbjct: 99  PP 100

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>HOMEZ_HUMAN (Q8IX15) Homeobox and leucine zipper protein Homez (Homeodomain|
           leucine zipper-containing factor)
          Length = 525

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 404 IPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAP 297
           +PGAP F   A+P PPP  ++        P+    P
Sbjct: 400 VPGAPSFQDPAIPTPPPSTRSLNERAETPPLPIPPP 435

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>FTSK_BRUSU (Q8FYI0) DNA translocase ftsK|
          Length = 854

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = -3

Query: 407 MIPGAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAP 273
           M  GAP+ G     APPP  + A    AA P     P AQ E  P
Sbjct: 300 MDDGAPLAGQEWHDAPPPRARKARVEQAA-PSPKPGPRAQREAQP 343

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>DNAA_AZOSE (Q5P4P0) Chromosomal replication initiator protein dnaA|
          Length = 481

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 398 GAPMFGGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVP 252
           GAP+     +PA      AA   + +GPV   APA    QAP      P
Sbjct: 72  GAPIEIELVLPAAGAARPAARPVIGSGPVAGPAPAPTPSQAPAATAAAP 120

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>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1|
          Length = 364

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = -3

Query: 434 AGAAQFPYQMIPGAPMFGGHAMPAPPP---FHQAAGAHMAAG 318
           A AA  P  ++ G P F   + P PPP   F  +A A  A G
Sbjct: 147 AAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVG 188

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>DOS_MOUSE (Q66L44) Protein Dos (Downstream of Stk11 protein) (Fragment)|
          Length = 552

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/56 (28%), Positives = 21/56 (37%)
 Frame = -3

Query: 383 GGHAMPAPPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQVPRTM*PSSNGGGG 216
           GG     PP   +   A +  G   +  P  +A    GD P +P        GGGG
Sbjct: 441 GGARAATPPGVARPTRAPLRRGDSVDCPPEGRALPITGDDPSIPVIEEEPGGGGGG 496

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>TBP_DROVI (Q9NHP5) TATA-box-binding protein (TATA-box factor) (TATA-binding|
           factor) (TATA sequence-binding protein) (Transcription
           initiation factor TFIID TBP subunit)
          Length = 349

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
 Frame = -3

Query: 377 HAMP---APPPFHQAAGAHMAAGPVTNDAPAAQAEQAPGDHPQV 255
           H MP   A PP    +  H   GP T   PA      PG  PQ+
Sbjct: 132 HMMPMTSAAPPDASLSNIHQTMGPSTPMTPATPGSADPGIVPQL 175

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>OTX_STRPU (Q26417) Homeobox protein OTX (SPOTX)|
          Length = 371

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
 Frame = -3

Query: 419 FPYQMIPGAPMFGGHAMPAP----PPFHQ-AAGAHMAAGPVTNDAPAAQAEQAP 273
           +PY      PM+G  A+PAP    PP  Q         GP+T++ P +     P
Sbjct: 75  YPYPYAYSNPMYGEGALPAPDRHLPPTQQHPMFQPQVLGPMTSERPHSNGIDPP 128

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>CEBPA_HUMAN (P49715) CCAAT/enhancer-binding protein alpha (C/EBP alpha)|
          Length = 358

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -3

Query: 428 AAQFPYQMIPGAPMFGGHAMPAPPPFHQAA 339
           A  FPYQ  P  P    H  P PPP H AA
Sbjct: 176 AGLFPYQPPPPPPP--SHPHPHPPPAHLAA 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,969,478
Number of Sequences: 219361
Number of extensions: 1092428
Number of successful extensions: 3996
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 3607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3965
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result