ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ERO1_ARATH (Q9C7S7) Endoplasmic oxidoreductin-1 precursor (EC 1.... 30 1.4
2CLCN2_RAT (P35525) Chloride channel protein 2 (ClC-2) 29 2.4
3CLCN2_MOUSE (Q9R0A1) Chloride channel protein 2 (ClC-2) 29 2.4
4CLCN2_RABIT (P51789) Chloride channel protein 2 (ClC-2) (PKA-act... 29 2.4
5CLCN2_CAVPO (Q9WU45) Chloride channel protein 2 (ClC-2) 29 3.1
6ERO2_ARATH (Q7X9I4) Endoplasmic oxidoreductin-2 precursor (EC 1.... 29 3.1
7CLCN2_HUMAN (P51788) Chloride channel protein 2 (ClC-2) 29 3.1
8DYHC_ASHGO (Q9C1M7) Dynein heavy chain, cytosolic (DYHC) 28 7.0
9ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor ... 28 7.0
10KIF14_HUMAN (Q15058) Kinesin-like protein KIF14 28 7.0
11YTNL_BACSU (O34980) Hypothetical protein ytnL 28 7.0
12ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor ... 27 9.1
13AAAS_HUMAN (Q9NRG9) Aladin (Adracalin) 27 9.1
14CN132_HUMAN (Q9NPU4) Protein C14orf132 27 9.1

>ERO1_ARATH (Q9C7S7) Endoplasmic oxidoreductin-1 precursor (EC 1.8.4.-)|
          Length = 469

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 385 LLNRLSESVKFVHETGSSSQEIIKQQ 308
           LLNRLSESVK VH+     + +++ Q
Sbjct: 422 LLNRLSESVKMVHDMSPDVERLMEDQ 447



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>CLCN2_RAT (P35525) Chloride channel protein 2 (ClC-2)|
          Length = 907

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 189 YITLPVWKKGVMNTACPLTSLQNYGFTFGQEAPFCKVEKLCCLMIS 326
           Y+TL  +   V+   C L S    G   G+E PF  +  +C  ++S
Sbjct: 185 YLTLKTFVAKVIGLTCALGS----GMPLGKEGPFVHIASMCAALLS 226



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>CLCN2_MOUSE (Q9R0A1) Chloride channel protein 2 (ClC-2)|
          Length = 908

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 189 YITLPVWKKGVMNTACPLTSLQNYGFTFGQEAPFCKVEKLCCLMIS 326
           Y+TL  +   V+   C L S    G   G+E PF  +  +C  ++S
Sbjct: 187 YLTLKTFVAKVIGLTCALGS----GMPLGKEGPFVHIASMCAALLS 228



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>CLCN2_RABIT (P51789) Chloride channel protein 2 (ClC-2) (PKA-activated chloride|
           channel)
          Length = 898

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 189 YITLPVWKKGVMNTACPLTSLQNYGFTFGQEAPFCKVEKLCCLMIS 326
           Y+TL  +   V+   C L S    G   G+E PF  +  +C  ++S
Sbjct: 182 YLTLKTFVAKVIGLTCALGS----GMPLGKEGPFVHIASMCAALLS 223



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>CLCN2_CAVPO (Q9WU45) Chloride channel protein 2 (ClC-2)|
          Length = 902

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 189 YITLPVWKKGVMNTACPLTSLQNYGFTFGQEAPFCKVEKLCCLMIS 326
           Y+TL  +   V+   C L S    G   G+E PF  +  +C  ++S
Sbjct: 181 YLTLKTFVAKVIGLTCALGS----GMPLGKEGPFVHIASMCASLLS 222



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>ERO2_ARATH (Q7X9I4) Endoplasmic oxidoreductin-2 precursor (EC 1.8.4.-)|
          Length = 472

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/22 (54%), Positives = 18/22 (81%)
 Frame = -3

Query: 385 LLNRLSESVKFVHETGSSSQEI 320
           LL+RLSESVK+VH+   +++ I
Sbjct: 421 LLHRLSESVKYVHDMSPAAERI 442



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>CLCN2_HUMAN (P51788) Chloride channel protein 2 (ClC-2)|
          Length = 898

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 189 YITLPVWKKGVMNTACPLTSLQNYGFTFGQEAPFCKVEKLCCLMIS 326
           Y+TL  +   V+   C L S    G   G+E PF  +  +C  ++S
Sbjct: 179 YLTLKTFIAKVIGLTCALGS----GMPLGKEGPFVHIASMCAALLS 220



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>DYHC_ASHGO (Q9C1M7) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4083

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 281  LLTKCETVILQRCKWASCIHNSFFPYWESDVHAGSSFL 168
            +L    ++I+ RC+ A       + + + D HAGS FL
Sbjct: 3913 ILVWFHSIIMARCRLAPIGFTKKYDFHDGDFHAGSKFL 3950



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>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl
           epoxidase)
          Length = 660

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 273 GQEAPFCKVEKLCCLMISWLDDPVSCTNLTDSDSLFKR 386
           G +AP  K E+L  +   W D+ +  +  TD D++ +R
Sbjct: 312 GVDAPNGKKERLLKIFGGWCDNVIDLSVATDEDAILRR 349



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>KIF14_HUMAN (Q15058) Kinesin-like protein KIF14|
          Length = 1648

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 291  CKVEKLCCLMISWLDDPVSCTNL 359
            C  E+L  LM  WL D + CTN+
Sbjct: 1312 CAFEQLVVLMKHWLSDLLPCTNI 1334



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>YTNL_BACSU (O34980) Hypothetical protein ytnL|
          Length = 416

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 38  NLHYIQNLKGTSPTKTEKKKGKLVFVWLPKFSTIYLLSTICKTLGSCSLHVHHSPSMEKR 217
           +L Y +N++G+ P +T         + L + S    LST+ K L     H+H  P + K 
Sbjct: 2   SLDYWRNIEGSYPYQTTGND----ILTLKEESNPVNLSTLEKQLIGIRRHLHQYPELSKE 57

Query: 218 SYE 226
            +E
Sbjct: 58  EFE 60



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>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 669

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 273 GQEAPFCKVEKLCCLMISWLDDPVSCTNLTDSDSLFKR 386
           G +AP  K E+L  +   W D+ +     TD D++ +R
Sbjct: 320 GADAPNGKKERLLKIFGGWCDNVIDLLVATDEDAILRR 357



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>AAAS_HUMAN (Q9NRG9) Aladin (Adracalin)|
          Length = 546

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 254 LQRCKWASCIHNSFFPY 204
           L  C+WAS +H S FP+
Sbjct: 115 LALCRWASSLHGSLFPH 131



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>CN132_HUMAN (Q9NPU4) Protein C14orf132|
          Length = 173

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = +2

Query: 116 WLPK-FSTIYLLSTI----CKTLGSCSLHVHHSPSM 208
           W PK  S + LLS +    CKT G+  L  HH PS+
Sbjct: 93  WRPKRLSGVCLLSALLPDPCKTNGTFLLQKHHLPSL 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,908,576
Number of Sequences: 219361
Number of extensions: 1153230
Number of successful extensions: 2559
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2559
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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