>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete
             sequence
          Length = 112892

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                         
Query: 304   agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttgacag 363
             ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| |||||||
Sbjct: 78992 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttgacag 78933

                               
Query: 364   attccgacagcctgttca 381
             |||| |||||||| ||||
Sbjct: 78932 attctgacagcctattca 78915

>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence,
           complete sequence
          Length = 163712

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 304 agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttgacag 363
           ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| |||||||
Sbjct: 908 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttgacag 849

                             
Query: 364 attccgacagcctgttca 381
           |||| |||||||| ||||
Sbjct: 848 attctgacagcctattca 831

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 304      agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttgacag 363
                ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| |||||||
Sbjct: 29770469 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttgacag 29770528

                                  
Query: 364      attccgacagcctgttca 381
                |||| |||||||| ||||
Sbjct: 29770529 attctgacagcctattca 29770546

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                            
Query: 304      agctctgttgtttaatgatttcctggctggatgatcctgtttcatgtacaaatttgacag 363
                ||||||||||||||||||  ||||   | |||| |||| ||||||||||||| |||||||
Sbjct: 29861891 agctctgttgtttaatgacatcctcaattgatggtcctttttcatgtacaaagttgacag 29861950

                                  
Query: 364      attccgacagcctgttca 381
                |||| |||||||| ||||
Sbjct: 29861951 attctgacagcctattca 29861968

>gb|AY110148.1| Zea mays CL28411_1 mRNA sequence
          Length = 953

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 346 catgtacaaatttgacagattccgacagcctgttcaaaagat 387
           ||||||||||||||||||| || || |||||||||| |||||
Sbjct: 806 catgtacaaatttgacagactctgagagcctgttcagaagat 765

>gb|AC092126.3| Homo sapiens chromosome 16 clone RP11-1114G22, complete sequence
          Length = 148883

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 314   tttaatgatttcctggctggat 335
             ||||||||||||||||||||||
Sbjct: 15166 tttaatgatttcctggctggat 15145

>gb|AC009085.5|AC009085 Homo sapiens chromosome 16 clone RP11-368L12, complete sequence
          Length = 155860

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 314   tttaatgatttcctggctggat 335
             ||||||||||||||||||||||
Sbjct: 88658 tttaatgatttcctggctggat 88637

>gb|AC162443.3| Mus musculus chromosome 7, clone RP23-457F4, complete sequence
          Length = 176520

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    atacaaaatttgaaagggaca 70
             |||||||||||||||||||||
Sbjct: 94167 atacaaaatttgaaagggaca 94187



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 50    atacaaaatttgaaagggaca 70
             |||||||||||||||||||||
Sbjct: 39831 atacaaaatttgaaagggaca 39851

>emb|BX897727.17| Zebrafish DNA sequence from clone DKEY-90A13 in linkage group 23,
             complete sequence
          Length = 236277

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   ttttgcaaagttgaaaagctc 308
             |||||||||||||||||||||
Sbjct: 82085 ttttgcaaagttgaaaagctc 82065

>emb|CR354596.12| Zebrafish DNA sequence from clone CH211-117K14 in linkage group 23,
              complete sequence
          Length = 172749

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     gaaaagaggtgaaatctacac 46
              |||||||||||||||||||||
Sbjct: 114113 gaaaagaggtgaaatctacac 114133

>gb|AC021026.20| Homo sapiens 3 BAC RP11-85A3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 75555

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   cagtatggaaaaaaggagtta 222
             |||||||||||||||||||||
Sbjct: 35174 cagtatggaaaaaaggagtta 35154

>gb|AC020890.22| Homo sapiens 3 BAC RP11-79L9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   cagtatggaaaaaaggagtta 222
             |||||||||||||||||||||
Sbjct: 96517 cagtatggaaaaaaggagtta 96497

>emb|AL807769.8| Zebrafish DNA sequence from clone CH211-197G8, complete sequence
          Length = 188344

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   ttttgcaaagttgaaaagctc 308
             |||||||||||||||||||||
Sbjct: 43311 ttttgcaaagttgaaaagctc 43291

>gb|AY536479.1| Philotrypesis sp. EJ-23 cytochrome b (cytb) gene, partial cds;
           mitochondrial
          Length = 462

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 333 gatgatcctgtttcatgtacaaat 356
           ||||||||||||||||||| ||||
Sbjct: 214 gatgatcctgtttcatgtagaaat 191

>gb|AY536478.1| Philotrypesis sp. EJ-11 cytochrome b-like (cytb) gene, partial
           sequence; mitochondrial
          Length = 458

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 333 gatgatcctgtttcatgtacaaat 356
           ||||||||||||||||||| ||||
Sbjct: 213 gatgatcctgtttcatgtaaaaat 190

>gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, complete sequence
          Length = 191711

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   ggatgatcctgtttcatgta 351
             ||||||||||||||||||||
Sbjct: 51041 ggatgatcctgtttcatgta 51060

>gb|AC121850.3| Mus musculus BAC clone RP24-92E18 from chromosome 3, complete sequence
          Length = 195731

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   ttacatctttgcaaaattac 260
             ||||||||||||||||||||
Sbjct: 83651 ttacatctttgcaaaattac 83632

>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete
             sequence
          Length = 234105

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   tgatcctgtttcatgtacaaattt 358
             |||| |||||||||||||||||||
Sbjct: 69503 tgattctgtttcatgtacaaattt 69480

>gb|AC007134.10| Arabidopsis thaliana chromosome 2 clone F7H1 map mi398, complete
             sequence
          Length = 84544

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 295   aagttgaaaagctctgttgtttaatgat 322
             |||||| ||| |||||||||||||||||
Sbjct: 33876 aagttgtaaaactctgttgtttaatgat 33849

>emb|AL732294.18| Mouse DNA sequence from clone RP23-59N7 on chromosome X, complete
             sequence
          Length = 112893

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 335   tgatcctgtttcatgtacaaattt 358
             |||| |||||||||||||||||||
Sbjct: 75406 tgattctgtttcatgtacaaattt 75383

>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6
          Length = 71736

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 295   aagttgaaaagctctgttgtttaatgat 322
             |||||| ||| |||||||||||||||||
Sbjct: 44216 aagttgtaaaactctgttgtttaatgat 44189

>gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, complete sequence
          Length = 157053

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   ctctgttgtttaatgatttc 325
             ||||||||||||||||||||
Sbjct: 42082 ctctgttgtttaatgatttc 42063

>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence
          Length = 238892

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ggatgatcctgtttcatgta 351
             ||||||||||||||||||||
Sbjct: 72826 ggatgatcctgtttcatgta 72807


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,258,082
Number of Sequences: 3902068
Number of extensions: 4258082
Number of successful extensions: 86895
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86810
Number of HSP's gapped (non-prelim): 81
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)