>UPPS_STRA5 (Q8DXD5) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 250

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 156 LFCRSDSALLISSLLPWHPCNRHHHFVAVTSYDRLMDE*NEVIRDYHMPH 7
           L  R+   L +S+ LPW       +F  V   D   DE ++ I DY+  H
Sbjct: 195 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRH 244

>UPPS_STRA3 (Q8E359) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 250

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -2

Query: 156 LFCRSDSALLISSLLPWHPCNRHHHFVAVTSYDRLMDE*NEVIRDYHMPH 7
           L  R+   L +S+ LPW       +F  V   D   DE ++ I DY+  H
Sbjct: 195 LIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRH 244

>MUS81_HUMAN (Q96NY9) Crossover junction endonuclease MUS81 (EC 3.1.22.-)|
          Length = 551

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 344 RKELDEFVAGAFDGPFREAVSMLSK----RRTYLLEMNG 240
           RK LD+  +   DG FRE    L +    RR YL+E +G
Sbjct: 334 RKRLDDLCSSIIDGRFREQKFRLKRCGLERRVYLVEEHG 372

>LOXL4_HUMAN (Q96JB6) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 4) (Lysyl oxidase-related protein
           C)
          Length = 756

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 108 WHPCNRHHHFVAV-TSYDRL 52
           WH C+RH+H + V T YD L
Sbjct: 607 WHQCHRHYHSIEVFTHYDLL 626

>LOXL4_BOVIN (Q8MJ24) Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 4)
          Length = 757

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -2

Query: 108 WHPCNRHHHFVAV-TSYDRL 52
           WH C+RH+H + V T YD L
Sbjct: 608 WHQCHRHYHSIEVFTHYDLL 627


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,419,924
Number of Sequences: 219361
Number of extensions: 919409
Number of successful extensions: 2151
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2150
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)