ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet95a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 260 4e-66
2gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 260 4e-66
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 260 4e-66
4dbj|AK071172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 4e-66
5gb|AY111228.1| Zea mays CL9792_1 mRNA sequence 50 0.007
6gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.41
7gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 44 0.41
8emb|AL662788.7| Human DNA sequence from clone RP11-778P13 on chr... 44 0.41
9emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.41
10ref|XM_508579.1| PREDICTED: Pan troglodytes spectrin, beta, non-... 42 1.6
11ref|NM_146867.1| Mus musculus olfactory receptor 131 (Olfr131), ... 42 1.6
12gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.6
13gb|AY317928.1| Mus musculus olfactory receptor Olfr131 (Olfr131)... 42 1.6
14gb|AY375033.1| Mus musculus olfactory receptor 131 (Olfr131) gen... 42 1.6
15gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome... 42 1.6
16gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 42 1.6
17ref|NM_006946.1| Homo sapiens spectrin, beta, non-erythrocytic 2... 42 1.6
18emb|BX294387.11| Zebrafish DNA sequence from clone DKEY-267L16 i... 42 1.6
19gb|AY073223.1| Mus musculus olfactory receptor MOR256-4 gene, co... 42 1.6
20gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L14, co... 42 1.6
21emb|BX511093.3| Zebrafish DNA sequence from clone CH211-194C21 i... 42 1.6
22gb|AF026488.1|AF026488 Homo sapiens beta III spectrin (SPTBN2) m... 42 1.6
23gb|AF026487.1|AF026487 Homo sapiens beta III spectrin (SPTBN2) m... 42 1.6
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25emb|BX323008.5| Zebrafish DNA sequence from clone DKEY-29D16 in ... 42 1.6
26dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
27dbj|AK072458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
28emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.6
29emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-3... 42 1.6
30dbj|AB008567.1| Homo sapiens mRNA for beta-spectrin III, complet... 42 1.6
31dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.6
32ref|XM_475591.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
33gb|AY855102.1| Nephila clavipes tubuliform spidroin mRNA, partia... 40 6.5
34gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.5
35gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
36ref|NG_003474.1| Rattus norvegicus olfactory receptor pseudogene... 40 6.5
37gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.5
38gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 40 6.5
39gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome ... 40 6.5
40emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.5
41gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.5
42emb|AL353575.24| Human DNA sequence from clone RP3-433O4 on chro... 40 6.5
43emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.5
44emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.5
45emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.5
46emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 6.5
47emb|AL663035.8| Mouse DNA sequence from clone RP23-432G17 on chr... 40 6.5
48emb|X70687.1|MBHRD M.bovis highly repetitive DNA sequence 40 6.5
49gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.5
50gb|AE012376.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.5
51gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.5
52gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, comple... 40 6.5
53gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.5
54gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.5
55dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
56dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
57dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
58gb|AC116628.4| Homo sapiens BAC clone RP11-369F24 from 2, comple... 40 6.5
59gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, comple... 40 6.5
60gb|AC132153.2| Homo sapiens BAC clone RP11-111G13 from 2, comple... 40 6.5
61gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.5
62dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.5
63dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
64dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
65dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
66emb|AJ001438.1|SS95BASAL Spermatozopsis similis mRNA for 95 kD b... 40 6.5
67dbj|AK071647.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
68emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.5
69gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.5
70gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.5
71gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, c... 40 6.5
72gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  260 bits (131), Expect = 4e-66
 Identities = 215/243 (88%)
 Strand = Plus / Minus

                                                                            
Query: 236      agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcatggacacggcctccc 295
                ||||||||||||||||||||||||||||||||||||||||||||  |   ||||||||||
Sbjct: 11587593 agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcgcgctgacggcctccc 11587534

                                                                            
Query: 296      tgaatggcccgtcgaaggcgccggccacgaactcgtccagctccttgcgtccgccgccga 355
                || | || |||||||| ||| |||| ||||||||||| |||||||| |  ||||||||||
Sbjct: 11587533 tgtacgggccgtcgaatgcgtcggcgacgaactcgtcgagctccttcctgccgccgccga 11587474

                                                                            
Query: 356      tgccgccggcctcgccgacgggcttgatcaccacgagcgtggcgccctggatcctcgtcc 415
                | |||||||||||||||||||||||||| || |||||||||||||||||||||| ||| |
Sbjct: 11587473 ttccgccggcctcgccgacgggcttgatgacgacgagcgtggcgccctggatccgcgtgc 11587414

                                                                            
Query: 416      cgtccgacagctccagcatgggcgcgtagcggagcttcatgttgcaggccggcacctgcg 475
                |||| || ||||| ||||| |||||||| |||||||||||||||||||| || ||||| |
Sbjct: 11587413 cgtcggagagctcgagcatcggcgcgtaccggagcttcatgttgcaggcggggacctggg 11587354

                   
Query: 476      tgc 478
                |||
Sbjct: 11587353 tgc 11587351
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>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score =  260 bits (131), Expect = 4e-66
 Identities = 215/243 (88%)
 Strand = Plus / Minus

                                                                          
Query: 236    agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcatggacacggcctccc 295
              ||||||||||||||||||||||||||||||||||||||||||||  |   ||||||||||
Sbjct: 138165 agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcgcgctgacggcctccc 138106

                                                                          
Query: 296    tgaatggcccgtcgaaggcgccggccacgaactcgtccagctccttgcgtccgccgccga 355
              || | || |||||||| ||| |||| ||||||||||| |||||||| |  ||||||||||
Sbjct: 138105 tgtacgggccgtcgaatgcgtcggcgacgaactcgtcgagctccttcctgccgccgccga 138046

                                                                          
Query: 356    tgccgccggcctcgccgacgggcttgatcaccacgagcgtggcgccctggatcctcgtcc 415
              | |||||||||||||||||||||||||| || |||||||||||||||||||||| ||| |
Sbjct: 138045 ttccgccggcctcgccgacgggcttgatgacgacgagcgtggcgccctggatccgcgtgc 137986

                                                                          
Query: 416    cgtccgacagctccagcatgggcgcgtagcggagcttcatgttgcaggccggcacctgcg 475
              |||| || ||||| ||||| |||||||| |||||||||||||||||||| || ||||| |
Sbjct: 137985 cgtcggagagctcgagcatcggcgcgtaccggagcttcatgttgcaggcggggacctggg 137926

                 
Query: 476    tgc 478
              |||
Sbjct: 137925 tgc 137923
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  260 bits (131), Expect = 4e-66
 Identities = 215/243 (88%)
 Strand = Plus / Minus

                                                                            
Query: 236      agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcatggacacggcctccc 295
                ||||||||||||||||||||||||||||||||||||||||||||  |   ||||||||||
Sbjct: 11584356 agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcgcgctgacggcctccc 11584297

                                                                            
Query: 296      tgaatggcccgtcgaaggcgccggccacgaactcgtccagctccttgcgtccgccgccga 355
                || | || |||||||| ||| |||| ||||||||||| |||||||| |  ||||||||||
Sbjct: 11584296 tgtacgggccgtcgaatgcgtcggcgacgaactcgtcgagctccttcctgccgccgccga 11584237

                                                                            
Query: 356      tgccgccggcctcgccgacgggcttgatcaccacgagcgtggcgccctggatcctcgtcc 415
                | |||||||||||||||||||||||||| || |||||||||||||||||||||| ||| |
Sbjct: 11584236 ttccgccggcctcgccgacgggcttgatgacgacgagcgtggcgccctggatccgcgtgc 11584177

                                                                            
Query: 416      cgtccgacagctccagcatgggcgcgtagcggagcttcatgttgcaggccggcacctgcg 475
                |||| || ||||| ||||| |||||||| |||||||||||||||||||| || ||||| |
Sbjct: 11584176 cgtcggagagctcgagcatcggcgcgtaccggagcttcatgttgcaggcggggacctggg 11584117

                   
Query: 476      tgc 478
                |||
Sbjct: 11584116 tgc 11584114
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>dbj|AK071172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081A12, full
            insert sequence
          Length = 1508

 Score =  260 bits (131), Expect = 4e-66
 Identities = 215/243 (88%)
 Strand = Plus / Minus

                                                                        
Query: 236  agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcatggacacggcctccc 295
            ||||||||||||||||||||||||||||||||||||||||||||  |   ||||||||||
Sbjct: 1239 agaagccgttcatctctagcaggtaggtgcggcgcttgctgagcgcgctgacggcctccc 1180

                                                                        
Query: 296  tgaatggcccgtcgaaggcgccggccacgaactcgtccagctccttgcgtccgccgccga 355
            || | || |||||||| ||| |||| ||||||||||| |||||||| |  ||||||||||
Sbjct: 1179 tgtacgggccgtcgaatgcgtcggcgacgaactcgtcgagctccttcctgccgccgccga 1120

                                                                        
Query: 356  tgccgccggcctcgccgacgggcttgatcaccacgagcgtggcgccctggatcctcgtcc 415
            | |||||||||||||||||||||||||| || |||||||||||||||||||||| ||| |
Sbjct: 1119 ttccgccggcctcgccgacgggcttgatgacgacgagcgtggcgccctggatccgcgtgc 1060

                                                                        
Query: 416  cgtccgacagctccagcatgggcgcgtagcggagcttcatgttgcaggccggcacctgcg 475
            |||| || ||||| ||||| |||||||| |||||||||||||||||||| || ||||| |
Sbjct: 1059 cgtcggagagctcgagcatcggcgcgtaccggagcttcatgttgcaggcggggacctggg 1000

               
Query: 476  tgc 478
            |||
Sbjct: 999  tgc 997
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>gb|AY111228.1| Zea mays CL9792_1 mRNA sequence
          Length = 632

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 448 agcttcatgttgcaggccggcacctgcgt 476
           |||||||||||||| ||||||||||||||
Sbjct: 388 agcttcatgttgcatgccggcacctgcgt 416
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 347     cgccgccgatgccgccggcctcgccg 372
               |||||||||||||||||||| |||||
Sbjct: 1213885 cgccgccgatgccgccggccccgccg 1213860
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 377     gcttgatcaccacgagcgtggcgccc 402
               |||||||||||| |||||||||||||
Sbjct: 1309986 gcttgatcaccaggagcgtggcgccc 1309961



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 179     tggtggccattgccatcgcc 198
               ||||||||||||||||||||
Sbjct: 3074758 tggtggccattgccatcgcc 3074739
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>emb|AL662788.7| Human DNA sequence from clone RP11-778P13 on chromosome 9 Contains part
             of the C9orf93 gene for chromosome 9 open reading frame
             93, complete sequence
          Length = 106363

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 23    tctcgtatcacttcatttcattcatc 48
             |||| |||||||||||||||||||||
Sbjct: 11285 tctcttatcacttcatttcattcatc 11260
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 347    cgccgccgatgccgccggcctcgccg 372
              |||||||||||||||||||| |||||
Sbjct: 228065 cgccgccgatgccgccggccccgccg 228040
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>ref|XM_508579.1| PREDICTED: Pan troglodytes spectrin, beta, non-erythrocytic 2
            (LOC451353), mRNA
          Length = 8483

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 95   ttacaaggatgccaaggcagc 115
            |||||||||||||||||||||
Sbjct: 7896 ttacaaggatgccaaggcagc 7916
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>ref|NM_146867.1| Mus musculus olfactory receptor 131 (Olfr131), mRNA
          Length = 945

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 97  acaaggatgccaaggcagcagcgaagaaa 125
           ||||||||| ||||||||||| |||||||
Sbjct: 893 acaaggatgtcaaggcagcagtgaagaaa 921
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     caccacgagcgtggcgccctg 404
               |||||||||||||||||||||
Sbjct: 2182722 caccacgagcgtggcgccctg 2182742
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>gb|AY317928.1| Mus musculus olfactory receptor Olfr131 (Olfr131) gene, complete
           cds
          Length = 945

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 97  acaaggatgccaaggcagcagcgaagaaa 125
           ||||||||| ||||||||||| |||||||
Sbjct: 893 acaaggatgtcaaggcagcagtgaagaaa 921
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>gb|AY375033.1| Mus musculus olfactory receptor 131 (Olfr131) gene, complete cds
          Length = 945

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 97  acaaggatgccaaggcagcagcgaagaaa 125
           ||||||||| ||||||||||| |||||||
Sbjct: 893 acaaggatgtcaaggcagcagtgaagaaa 921
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>gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome 17, complete sequence
          Length = 215469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 97    acaaggatgccaaggcagcagcgaagaaa 125
             ||||||||| ||||||||||| |||||||
Sbjct: 62460 acaaggatgtcaaggcagcagtgaagaaa 62432
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 351    gccgatgccgccggcctcgcc 371
              |||||||||||||||||||||
Sbjct: 805543 gccgatgccgccggcctcgcc 805563
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>ref|NM_006946.1| Homo sapiens spectrin, beta, non-erythrocytic 2 (SPTBN2), mRNA
          Length = 7864

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 95   ttacaaggatgccaaggcagc 115
            |||||||||||||||||||||
Sbjct: 6843 ttacaaggatgccaaggcagc 6863
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>emb|BX294387.11| Zebrafish DNA sequence from clone DKEY-267L16 in linkage group 9,
              complete sequence
          Length = 167582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 41     cattcatccattaatcgatca 61
              |||||||||||||||||||||
Sbjct: 159799 cattcatccattaatcgatca 159819
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>gb|AY073223.1| Mus musculus olfactory receptor MOR256-4 gene, complete cds
          Length = 945

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 97  acaaggatgccaaggcagcagcgaagaaa 125
           ||||||||| ||||||||||| |||||||
Sbjct: 893 acaaggatgtcaaggcagcagtgaagaaa 921
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>gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L14, complete sequence
          Length = 156238

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 23    tctcgtatcacttcatttcattcat 47
             |||| ||||||||||||||||||||
Sbjct: 39652 tctcttatcacttcatttcattcat 39628
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>emb|BX511093.3| Zebrafish DNA sequence from clone CH211-194C21 in linkage group 1,
             complete sequence
          Length = 211586

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tcatttcattcatccattaat 55
             |||||||||||||||||||||
Sbjct: 83092 tcatttcattcatccattaat 83112
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>gb|AF026488.1|AF026488 Homo sapiens beta III spectrin (SPTBN2) mRNA, partial cds
          Length = 1695

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 95  ttacaaggatgccaaggcagc 115
           |||||||||||||||||||||
Sbjct: 362 ttacaaggatgccaaggcagc 382
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>gb|AF026487.1|AF026487 Homo sapiens beta III spectrin (SPTBN2) mRNA, partial cds
          Length = 2117

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 95   ttacaaggatgccaaggcagc 115
            |||||||||||||||||||||
Sbjct: 1076 ttacaaggatgccaaggcagc 1096
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 346      ccgccgccgatgccgccggcctcgccgac 374
                ||||||||||||| |||||| ||||||||
Sbjct: 19834016 ccgccgccgatgcggccggcttcgccgac 19834044
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>emb|BX323008.5| Zebrafish DNA sequence from clone DKEY-29D16 in linkage group 1,
             complete sequence
          Length = 216850

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tcatttcattcatccattaat 55
             |||||||||||||||||||||
Sbjct: 23211 tcatttcattcatccattaat 23231
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 346   ccgccgccgatgccgccggcctcgccgac 374
             ||||||||||||| |||||| ||||||||
Sbjct: 58456 ccgccgccgatgcggccggcttcgccgac 58484
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>dbj|AK072458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121E21, full
            insert sequence
          Length = 4525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 346  ccgccgccgatgccgccggcctcgccgac 374
            ||||||||||||| |||||| ||||||||
Sbjct: 3644 ccgccgccgatgcggccggcttcgccgac 3616
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 346     ccgccgccgatgccgccggcc 366
               |||||||||||||||||||||
Sbjct: 3317402 ccgccgccgatgccgccggcc 3317382
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>emb|AL160237.4|CNS01RH1 Human chromosome 14 DNA sequence BAC R-388E23 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 206533

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 23     tctcgtatcacttcatttcattcat 47
              |||||| ||||||||||||||||||
Sbjct: 120539 tctcgtctcacttcatttcattcat 120515
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>dbj|AB008567.1| Homo sapiens mRNA for beta-spectrin III, complete cds
          Length = 7864

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 95   ttacaaggatgccaaggcagc 115
            |||||||||||||||||||||
Sbjct: 6843 ttacaaggatgccaaggcagc 6863
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>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete
              sequence
          Length = 200458

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 95     ttacaaggatgccaaggcagc 115
              |||||||||||||||||||||
Sbjct: 106223 ttacaaggatgccaaggcagc 106203
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>ref|XM_475591.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 324

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 ccgccgccgatgccgccggc 365
           ||||||||||||||||||||
Sbjct: 107 ccgccgccgatgccgccggc 88
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>gb|AY855102.1| Nephila clavipes tubuliform spidroin mRNA, partial cds
          Length = 1779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 351 gccgatgccgccggcctcgc 370
           ||||||||||||||||||||
Sbjct: 64  gccgatgccgccggcctcgc 83
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 351    gccgatgccgccggcctcgccgac 374
              ||||||||||||| ||||||||||
Sbjct: 476114 gccgatgccgccgccctcgccgac 476091
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>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04,
             complete sequence
          Length = 133271

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   ccgccgccgatgccgccggc 365
             ||||||||||||||||||||
Sbjct: 52550 ccgccgccgatgccgccggc 52569
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>ref|NG_003474.1| Rattus norvegicus olfactory receptor pseudogene 1685 (Olr1685-ps) on
            chromosome 20
          Length = 1164

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 97   acaaggatgccaaggcagcagcgaagaa 124
            ||||||||| ||||||||||| ||||||
Sbjct: 994  acaaggatgtcaaggcagcagtgaagaa 1021
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 348     gccgccgatgccgccggcctcgccgacg 375
               ||||||||||||||| ||| ||||||||
Sbjct: 3756136 gccgccgatgccgcccgccgcgccgacg 3756109
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>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 350   cgccgatgccgccggcctcgccga 373
             ||||||||||||||||| ||||||
Sbjct: 68023 cgccgatgccgccggccgcgccga 68000
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>gb|AC115357.5| Mus musculus BAC clone RP23-81J4 from chromosome 14, complete sequence
          Length = 233685

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    atcacttcatttcattcatc 48
             ||||||||||||||||||||
Sbjct: 83843 atcacttcatttcattcatc 83824
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 359     cgccggcctcgccgacgggc 378
               ||||||||||||||||||||
Sbjct: 1766994 cgccggcctcgccgacgggc 1766975
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 346     ccgccgccgatgccgccggcctcg 369
               ||||||||||| ||||||||||||
Sbjct: 3624814 ccgccgccgattccgccggcctcg 3624791
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>emb|AL353575.24| Human DNA sequence from clone RP3-433O4 on chromosome X, complete
            sequence
          Length = 70581

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   tatcacttcatttcattcat 47
            ||||||||||||||||||||
Sbjct: 5459 tatcacttcatttcattcat 5478
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>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 349    ccgccgatgccgccggcctcgccg 372
              |||||||||||||||||| |||||
Sbjct: 313961 ccgccgatgccgccggccccgccg 313984
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 348     gccgccgatgccgccggcctcgccgacg 375
               ||||||||||||||| ||| ||||||||
Sbjct: 3496502 gccgccgatgccgcccgccgcgccgacg 3496475
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>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 349    ccgccgatgccgccggcctcgccg 372
              |||||||||||||||||| |||||
Sbjct: 121673 ccgccgatgccgccggccccgccg 121696
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 346   ccgccgccgatgccgccggcctcg 369
             |||||||||| |||||||||||||
Sbjct: 36161 ccgccgccgacgccgccggcctcg 36138
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>emb|AL663035.8| Mouse DNA sequence from clone RP23-432G17 on chromosome 11 Contains a
              novel pseudogene, complete sequence
          Length = 203319

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     cttcatttcattcatccatt 52
              ||||||||||||||||||||
Sbjct: 166095 cttcatttcattcatccatt 166114
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>emb|X70687.1|MBHRD M.bovis highly repetitive DNA sequence
          Length = 2365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 349 ccgccgatgccgccggcctcgccg 372
           |||||||||||||||||| |||||
Sbjct: 463 ccgccgatgccgccggccccgccg 486
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 347     cgccgccgatgccgccggcc 366
               ||||||||||||||||||||
Sbjct: 2064068 cgccgccgatgccgccggcc 2064087
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>gb|AE012376.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 284
            of 460 of the complete genome
          Length = 10101

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 351  gccgatgccgccggcctcgccgac 374
            |||||||||||||||| |||||||
Sbjct: 9410 gccgatgccgccggccacgccgac 9387
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 348    gccgccgatgccgccggcctcgcc 371
              |||||||||||||| |||||||||
Sbjct: 259478 gccgccgatgccgcgggcctcgcc 259501
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>gb|AC097522.4| Homo sapiens BAC clone RP11-588F10 from 4, complete sequence
          Length = 207883

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tatcacttcatttcattcat 47
              ||||||||||||||||||||
Sbjct: 151228 tatcacttcatttcattcat 151247
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 351     gccgatgccgccggcctcgccgac 374
               |||||||||||||||| |||||||
Sbjct: 1772508 gccgatgccgccggccacgccgac 1772531
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 347     cgccgccgatgccgccggcc 366
               ||||||||||||||||||||
Sbjct: 2264720 cgccgccgatgccgccggcc 2264701
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 356      tgccgccggcctcgccgacg 375
                ||||||||||||||||||||
Sbjct: 25603417 tgccgccggcctcgccgacg 25603398
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 352      ccgatgccgccggcctcgccgacg 375
                ||||||||||| ||||||||||||
Sbjct: 23777405 ccgatgccgcccgcctcgccgacg 23777382
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 346     ccgccgccgatgccgccggc 365
               ||||||||||||||||||||
Sbjct: 2376950 ccgccgccgatgccgccggc 2376969
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>gb|AC116628.4| Homo sapiens BAC clone RP11-369F24 from 2, complete sequence
          Length = 107755

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 23    tctcgtatcacttcatttcattca 46
             |||||| |||||||||||||||||
Sbjct: 15505 tctcgtctcacttcatttcattca 15482
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>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence
          Length = 177385

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     gaaatgatggtggcgattac 98
              ||||||||||||||||||||
Sbjct: 167946 gaaatgatggtggcgattac 167965
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>gb|AC132153.2| Homo sapiens BAC clone RP11-111G13 from 2, complete sequence
          Length = 154924

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 23    tctcgtatcacttcatttcattca 46
             |||||| |||||||||||||||||
Sbjct: 28430 tctcgtctcacttcatttcattca 28453
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ccgccggcctcgccgacggg 377
              ||||||||||||||||||||
Sbjct: 702031 ccgccggcctcgccgacggg 702050
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     gccacgaactcgtccagctc 338
               ||||||||||||||||||||
Sbjct: 2652889 gccacgaactcgtccagctc 2652870
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 352    ccgatgccgccggcctcgccgacg 375
              ||||||||||| ||||||||||||
Sbjct: 125481 ccgatgccgcccgcctcgccgacg 125458
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 352   ccgatgccgccggcctcgccgacg 375
             ||||||||||| ||||||||||||
Sbjct: 17070 ccgatgccgcccgcctcgccgacg 17047
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>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0686C03
          Length = 164529

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   tgccgccggcctcgccgacg 375
             ||||||||||||||||||||
Sbjct: 90108 tgccgccggcctcgccgacg 90089
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>emb|AJ001438.1|SS95BASAL Spermatozopsis similis mRNA for 95 kD basal apparatus-protein
          Length = 3113

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  ccgccgccgatgccgccggc 365
            ||||||||||||||||||||
Sbjct: 2403 ccgccgccgatgccgccggc 2384
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>dbj|AK071647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107H06, full
           insert sequence
          Length = 660

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 346 ccgccgccgatgccgccggc 365
           ||||||||||||||||||||
Sbjct: 237 ccgccgccgatgccgccggc 218
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 344     gtccgccgccgatgccgccg 363
               ||||||||||||||||||||
Sbjct: 3599465 gtccgccgccgatgccgccg 3599446
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 348     gccgccgatgccgccggcctcgccgacg 375
               ||||||||||||||| ||| ||||||||
Sbjct: 1369934 gccgccgatgccgcccgccgcgccgacg 1369961
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     ggccattgccatcgccatag 202
               ||||||||||||||||||||
Sbjct: 2021814 ggccattgccatcgccatag 2021795
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>gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, complete sequence
          Length = 217847

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    ccgacagaagagagcaatca 164
              ||||||||||||||||||||
Sbjct: 145391 ccgacagaagagagcaatca 145410
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>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03,
              complete sequence
          Length = 107870

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    ccgccgccgatgccgccggc 365
              ||||||||||||||||||||
Sbjct: 104865 ccgccgccgatgccgccggc 104884


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,231,645
Number of Sequences: 3902068
Number of extensions: 3231645
Number of successful extensions: 93078
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90597
Number of HSP's gapped (non-prelim): 2477
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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