ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet95a04 |
|---|---|
| Clone Library Name | barley_pub |
>G6PI_PSEAE (Q9HV67) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 31.6 bits (70), Expect = 0.48 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S ++AA++FGIRE P+W V G Sbjct: 242 RHFIAVSSNKEAAIAFGIREENIFPMWDWVGG 273
>G6PI2_PSEPK (Q88DW7) Glucose-6-phosphate isomerase 2 (EC 5.3.1.9) (GPI 2)| (Phosphoglucose isomerase 2) (PGI 2) (Phosphohexose isomerase 2) (PHI 2) Length = 554 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S + AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNKAAAVAFGIREENIFPMWDWVGG 273
>G6PI1_PSEPK (Q88LW9) Glucose-6-phosphate isomerase 1 (EC 5.3.1.9) (GPI 1)| (Phosphoglucose isomerase 1) (PGI 1) (Phosphohexose isomerase 1) (PHI 1) Length = 554 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S + AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNKAAAVAFGIREENIFPMWDWVGG 273
>TOC75_PEA (Q43715) Protein TOC75, chloroplast precursor (75 kDa translocon at| the outer-envelope-membrane of chloroplasts) (Import intermediate associated protein of 75 kDa) (75 kDa chloroplast outer envelope protein) Length = 809 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Frame = +1 Query: 76 QQHDH--TRASAGLQKLKP*PGILPLEFNTTHKKRKICTEMAGSGPVSDYYLPEGMSEPF 249 +++DH TR S+ L P G FN++ K T S S ++L + PF Sbjct: 21 RRNDHITTRTSSLKCHLSPSSGDNNDSFNSSLLKTISTTVAVSSAAASAFFLTGSLHSPF 80 Query: 250 SDPKGNGCVAAGGNGSHG 303 + G A GG G G Sbjct: 81 PNFSGLNAAAGGGAGGGG 98
>INSL6_RAT (Q9WV41) Insulin-like peptide INSL6 precursor (Insulin-like peptide| 6) [Contains: Insulin-like peptide INSL6 B chain; Insulin-like peptide INSL6 A chain] Length = 188 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Frame = +3 Query: 84 RSHKSFGRFT------KTKTLAWDSASRIQYNTQKEENLYRNG 194 RS S+GRFT K T W+S S Y +KEE L + G Sbjct: 79 RSSSSWGRFTNPGVSQKKATHTWESQSLPNYQLKKEELLPKTG 121
>PCAF_HUMAN (Q92831) Histone acetyltransferase PCAF (EC 2.3.1.48)| (P300/CBP-associated factor) (P/CAF) (Histone acetylase PCAF) Length = 832 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 181 CTEMAGSGPVSDYYLPEGMSEPFSDPKGNGC-VAAGGNGSHGPPIEAASILMASAIG 348 C AG+G P+ + P + P+G+ C AAGG+G+ GP A+ A G Sbjct: 12 CGAGAGAGAGPGALPPQPAALPPAPPQGSPCAAAAGGSGACGPATAVAAAGTAEGPG 68
>FBX42_PONPY (Q5RDA9) F-box only protein 42| Length = 717 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 8/52 (15%) Frame = -3 Query: 359 PTLVPIAEAIRM--------EAASIGGPWLPLPPAATQPFPLGSENGSLIPS 228 P LVP R EA + G W L P A + P GS GSL P+ Sbjct: 380 PALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPA 431
>FBX42_MOUSE (Q6PDJ6) F-box only protein 42| Length = 717 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 8/52 (15%) Frame = -3 Query: 359 PTLVPIAEAIRM--------EAASIGGPWLPLPPAATQPFPLGSENGSLIPS 228 P LVP R EA + G W L P A + P GS GSL P+ Sbjct: 380 PALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPA 431
>FBX42_HUMAN (Q6P3S6) F-box only protein 42| Length = 717 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 8/52 (15%) Frame = -3 Query: 359 PTLVPIAEAIRM--------EAASIGGPWLPLPPAATQPFPLGSENGSLIPS 228 P LVP R EA + G W L P A + P GS GSL P+ Sbjct: 380 PALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPA 431
>G6PI_PSEU2 (Q4ZY88) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNNAAAVAFGIREENIFPMWDWVGG 273
>G6PI_PSESM (Q888Q7) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNNAAAVAFGIREENIFPMWDWVGG 273
>G6PI_PSEPF (Q3K6Q4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNNAAAVAFGIREENIFPMWDWVGG 273
>G6PI_PSEFL (Q848I4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNNAAAVAFGIREENIFPMWDWVGG 273
>G6PI_PSEF5 (Q4K5Y1) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNNAAAVAFGIREENIFPMWDWVGG 273
>G6PI_PSE14 (Q48N88) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -2 Query: 306 RPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 R A++S AAV+FGIRE P+W V G Sbjct: 242 RHFIAVSSNNAAAVAFGIREENIFPMWDWVGG 273
>HSP70_ONCMY (P08108) Heat shock cognate 70 kDa protein (HSP70)| Length = 651 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = +1 Query: 223 LPEGMSEPFSDPKGNGCVAAGGNGSHGPPIE 315 +PEGM+ F G G A GG GS GP IE Sbjct: 621 MPEGMAGGFP---GAGGAAPGGGGSSGPTIE 648
>CCNB3_HUMAN (Q8WWL7) G2/mitotic-specific cyclin-B3| Length = 1395 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = -3 Query: 296 LPLPPAATQPFPLGSENGSLIPS 228 LPLPP +++P P S++ ++PS Sbjct: 3 LPLPPQSSKPVPKKSQSSKIVPS 25
>G3P2_AGABI (P32636) Glyceraldehyde-3-phosphate dehydrogenase 2 (EC 1.2.1.12)| (GAPDH 2) Length = 338 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/44 (27%), Positives = 25/44 (56%) Frame = -2 Query: 180 DFPLFVCCIEFERQNPRLRF*FL*TCRSSCVIVLLQLVVAQHDN 49 D P++VC + ++ NP+ +C ++C+ L +++ HDN Sbjct: 125 DAPMYVCGVNLDKYNPKDTIISNASCTTNCLATLAKVI---HDN 165
>CDX4_HUMAN (O14627) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 284 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +1 Query: 256 PKGNGCVAAGGNGSHGPPIEAASILMASAIGTSVGF 363 P G+G GG G G P+ A++ A A +G+ Sbjct: 21 PGGDGTAGTGGTGGGGSPMPASNFAAAPAFSHYMGY 56
>RNC_SYMTH (Q67PF5) Ribonuclease III (EC 3.1.26.3) (RNase III)| Length = 235 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 147 RIQYNTQKEENLYRNGRIRPGLRLLSSRG 233 R+ Y TQ +E L R G P RLL G Sbjct: 162 RVDYKTQLQEQLQRQGAAAPQYRLLVEEG 190
>CB024_BOVIN (Q5E9J2) Protein C2orf24 homolog| Length = 411 Score = 23.9 bits (50), Expect(2) = 4.2 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -1 Query: 379 NSPTARSRHLCRSQRPSGWKLPQSEAHG 296 +SPT R+ H P+G P S +HG Sbjct: 346 DSPTCRACHHLNHTVPTGPPSPWSHSHG 373 Score = 23.1 bits (48), Expect(2) = 4.2 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -3 Query: 302 PWLPLPPAATQP 267 PW P+PP QP Sbjct: 379 PWSPMPPLLPQP 390
>DNAJ2_MYCPA (Q73T77) Chaperone protein dnaJ 2| Length = 392 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +1 Query: 175 KICTEMAGSGPVSDYYLPEGMSEPFSDPKGNGCV 276 K+C GSG +S G SEP +D +G+G + Sbjct: 189 KVCPTCNGSGVISRNQGAFGFSEPCTDCRGSGSI 222
>RL5_ANOGA (O44248) 60S ribosomal protein L5| Length = 327 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Frame = -1 Query: 367 ARSRHLCRSQRPSGWKLPQSEAHGCHCLRP---RRSRFLWDPRMARSSPLEDSNRRPGRI 197 A R + S+R + P+S C P RRSR RS P R P R Sbjct: 245 ASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRR 304 Query: 196 RPFLYRFSSFCVL 158 RPF + S +C++ Sbjct: 305 RPFFFS-SWWCII 316
>P85B_BOVIN (P23726) Phosphatidylinositol 3-kinase regulatory beta subunit| (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta) Length = 724 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = -3 Query: 326 MEAASIGGPWLPLPPAATQPFPLGSENGSLIPS 228 +E + P LP P T+P P G NG PS Sbjct: 288 LEEQEVAPPALPPKPPKTKPAPTGLANGGSPPS 320
>DDL_RHIME (Q92NM4) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 308 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -3 Query: 350 VPIAEAIRMEAASIGGPWLPLPPAATQPFPLGSENGSLI 234 +P+AEA+ M+ S G PP +P GS G +I Sbjct: 110 IPVAEALVMDRRSFGNQHPMKPPYVVKPVREGSSFGVVI 148
>TABA_PSESZ (P31851) Protein tabA| Length = 420 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 189 NGRIRPGLRLLSSRGDERAILGSQXXXXXXXXXQWQP 299 NGR+RP +L+ GD I ++ QWQP Sbjct: 373 NGRLRPAELMLTDDGDVVEIRRAETFDDHTGPIQWQP 409
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -3 Query: 368 SEKPTLVPIAEAIRMEAASIGGPWLPLPPAATQPFPLGS 252 S P+LV +E+ R ASI P+ P P ++Q FP+G+ Sbjct: 988 SRVPSLVATSESPR---ASISNPYAP--PQSSQQFPIGT 1021
>SYM_PORGI (Q7MXK7) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 680 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +1 Query: 202 GPVSDYYLPEGMSEPFSDPKGNGCVAAGGNGSHGPPI 312 G ++ Y+P + + +G C+ GG+ HG PI Sbjct: 24 GHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPI 60
>PGK_SYNEL (Q8DGP7) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 400 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 309 RRPMAAIASGRDAAVSFGIREWLAHPLWKIVIG 211 RRP+AAI G + G+ E L + K++IG Sbjct: 190 RRPLAAIVGGSKVSSKIGVIEALLEKVDKLLIG 222
>ODO1_PONPY (Q5RCB8) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -1 Query: 319 LPQSEAHGC-HCLRPRRSRFLWDPRMARSSP 230 LP HG H + + F DPRMARSSP Sbjct: 429 LPSYTTHGTVHVVVNNQIGFTTDPRMARSSP 459
>ODO1_MACFA (Q60HE2) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1023 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -1 Query: 319 LPQSEAHGC-HCLRPRRSRFLWDPRMARSSP 230 LP HG H + + F DPRMARSSP Sbjct: 429 LPSYTTHGTVHVVVNNQIGFTTDPRMARSSP 459
>GLXA_RHIME (O87389) HTH-type transcriptional regulator glxA| Length = 324 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/71 (29%), Positives = 36/71 (50%) Frame = +1 Query: 133 GILPLEFNTTHKKRKICTEMAGSGPVSDYYLPEGMSEPFSDPKGNGCVAAGGNGSHGPPI 312 G+ PL+ ++ T+ A VSD+YL ++EP + +G+ AA G++ P + Sbjct: 168 GVAPLDMMHAMIAERLGTDFARR--VSDWYLHAAVAEPAAPQRGS---AAERFGTNHPAL 222 Query: 313 EAASILMASAI 345 A M +AI Sbjct: 223 LAVLEKMETAI 233
>CARP2_RHINI (P43231) Rhizopuspepsin-2 precursor (EC 3.4.23.21) (Aspartate| protease) Length = 391 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +1 Query: 151 FNTTHKKRKICTEMAGSGPVSDYY 222 F TT TE GS PV+DYY Sbjct: 56 FRTTSSSNSTSTEGTGSVPVTDYY 79
>SWR1_CRYNE (Q5K8T2) Helicase SWR1 (EC 3.6.1.-)| Length = 1246 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -1 Query: 322 KLPQSEAHGCHCLRPRRSRFLWDPRMARSSPLE 224 +LP H +C +R RFL+D M+R+S E Sbjct: 636 QLPGKFEHVVYCRLSKRQRFLYDEFMSRASTHE 668
>RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (Nuclear receptor coregulator 1) (Fragment) Length = 458 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 226 PEGMSEPFSDPKGNGCVAAGGNGSHGPP 309 P G S P S P+ N V+ G GS GPP Sbjct: 75 PPGFSGPVSSPQINSTVSLPGGGS-GPP 101
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 3/54 (5%) Frame = -3 Query: 374 TYSEKPTLVPIAEAIRMEAASIGGPWLP---LPPAATQPFPLGSENGSLIPSGR 222 TY + A A + GGP P PP QP P G + G P R Sbjct: 235 TYDPQQAAASAAAAAAAQQQQAGGPPPPGHGPPPPQHQPSPYGGQQGGWAPPPR 288
>IL4RA_MOUSE (P16382) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) [Contains: Soluble interleukin-4 receptor alpha chain (IL-4-binding protein) (IL4-BP)] Length = 810 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = -3 Query: 368 SEKPTLVPIAEAIRMEAASIGGPWLPLPPAATQ-PFPLGSENG 243 S+ P P E + +E GG W+ PP A Q P P G + G Sbjct: 664 SDPPKSPP--ECLGLELGLKGGDWVKAPPPADQVPKPFGDDLG 704
>SPL2_ARATH (Q9S840) Squamosa promoter-binding-like protein 2| Length = 419 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = -3 Query: 377 FTYSEKPT--LVPIAEAIRMEAASIGGPWLPLPPAATQPFPL 258 FT P+ L P+A + S+ G W P PPA P L Sbjct: 358 FTLDHHPSSNLQPVAHRSAAQLNSVSGYWQPDPPAVEGPTAL 399
>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (MHC class I regulatory element-binding protein H-2RIIBP) Length = 520 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 226 PEGMSEPFSDPKGNGCVAAGGNGSHGPP 309 P G S P S P+ N V+ G GS GPP Sbjct: 137 PPGFSGPVSSPQINSTVSLPGGGS-GPP 163
>ODO1_MOUSE (Q60597) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1019 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -1 Query: 319 LPQSEAHGC-HCLRPRRSRFLWDPRMARSSP 230 LP HG H + + F DPRMARSSP Sbjct: 425 LPSYTTHGTVHVVVNNQIGFTTDPRMARSSP 455
>ODO1_HUMAN (Q02218) 2-oxoglutarate dehydrogenase E1 component, mitochondrial| precursor (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase) Length = 1002 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = -1 Query: 319 LPQSEAHGC-HCLRPRRSRFLWDPRMARSSP 230 LP HG H + + F DPRMARSSP Sbjct: 429 LPSYTTHGTVHVVVNNQIGFTTDPRMARSSP 459
>IL4RA_RAT (Q63257) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 801 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Frame = -3 Query: 368 SEKPTLVPIAEAIRMEAASIGGPWLPLPPAATQ-PFPLGSENG 243 S P P E + +E GG WL PP + Q P P G + G Sbjct: 655 SAPPNSTP--ECLGLELGLKGGTWLKAPPPSEQVPKPFGDDLG 695
>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 226 PEGMSEPFSDPKGNGCVAAGGNGSHGPP 309 P G S P S P+ N V+ G GS GPP Sbjct: 150 PPGFSGPVSSPQINSTVSLPGGGS-GPP 176
>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +1 Query: 226 PEGMSEPFSDPKGNGCVAAGGNGSHGPP 309 P G S P S P+ N V+ G GS GPP Sbjct: 150 PPGFSGPVSSPQINSTVSLPGGGS-GPP 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,948,168 Number of Sequences: 219361 Number of extensions: 1430819 Number of successful extensions: 4765 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 4546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4759 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
