Clone Name | rbaet95a04 |
---|---|
Clone Library Name | barley_pub |
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 146 tcgaattcaatacaacacacaaaaag 171 ||||||||||||||| |||||||||| Sbjct: 140956 tcgaattcaatacaatacacaaaaag 140931
>ref|XM_318076.2| Anopheles gambiae str. PEST ENSANGP00000017729 (ENSANGG00000015240), partial mRNA Length = 630 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 tacaacacacaaaaagaggaaa 177 |||||||||||||||||||||| Sbjct: 63 tacaacacacaaaaagaggaaa 42
>ref|XM_454967.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E22561g predicted mRNA Length = 2175 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcatcccaatttgtcattaa 41 |||||||||||||||||||| Sbjct: 920 tcatcccaatttgtcattaa 901
>gb|U23413.1| Caenorhabditis elegans cosmid B0353, complete sequence Length = 26112 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 acaaaaagaggaaaatctgt 183 |||||||||||||||||||| Sbjct: 15827 acaaaaagaggaaaatctgt 15846
>emb|AL445123.11| Human DNA sequence from clone RP11-242F11 on chromosome 6 Contains the 3' part of a novel gene and a novel gene, complete sequence Length = 120709 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gattgaggcagcttccatcc 328 |||||||||||||||||||| Sbjct: 1571 gattgaggcagcttccatcc 1590
>emb|AL121950.8|HSDJ442L6 Human DNA sequence from clone RP3-442L6 on chromosome 6 Contains the 5' end of RHAG gene for Rhesus blood group-associated glycoprotein (RH50A), the TPX1 gene for Testis specific protein 1 and the 3' end of the gene for specific granule protein (28 kDa) (SGP28), complete sequence Length = 118524 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggcaatggcagccatggg 303 |||||||||||||||||||| Sbjct: 73994 gaggcaatggcagccatggg 73975
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tcatcccaatttgtcattaa 41 |||||||||||||||||||| Sbjct: 2002259 tcatcccaatttgtcattaa 2002278
>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence Length = 138567 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 atttgtcattaaagcatgga 49 |||||||||||||||||||| Sbjct: 39595 atttgtcattaaagcatgga 39576 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,435,837 Number of Sequences: 3902068 Number of extensions: 3435837 Number of successful extensions: 83310 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83283 Number of HSP's gapped (non-prelim): 27 length of query: 394 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 372 effective length of database: 17,147,199,772 effective search space: 6378758315184 effective search space used: 6378758315184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)