Clone Name | rbaet94h12 |
---|---|
Clone Library Name | barley_pub |
>GLDSA_STRFR (Q53U20) L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC| 2.6.1.-) (L-glutamine:DOI aminotransferase) (L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase) (L-glutamine:amino-DOI aminotransferase) (Bifunctional L-glutamine: Length = 424 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 154 PKP*PGAPPRCLVITGSGSWYISSP 228 P+P PG P + GSG W IS P Sbjct: 22 PQPAPGVPAAVAEVLGSGRWSISGP 46
>GLDSA_STRRI (Q4R0W2) L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC| 2.6.1.-) (L-glutamine:DOI aminotransferase) (L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase) (L-glutamine:amino-DOI aminotransferase) Length = 424 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 154 PKP*PGAPPRCLVITGSGSWYISSP 228 P+P PG P + GSG W IS P Sbjct: 22 PQPAPGVPDAVADVLGSGRWSISGP 46
>PNPH_YEAST (Q05788) Purine nucleoside phosphorylase (EC 2.4.2.1) (Inosine| phosphorylase) (PNP) Length = 311 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +1 Query: 175 PPRCLVITGSGSWYISSPLNRD 240 PPR L+I GSG IS+ L+RD Sbjct: 37 PPRTLIICGSGLGGISTKLSRD 58
>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch 4)| (hNotch4) [Contains: Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 2003 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +1 Query: 154 PKP*PGAPPRCLVITGSG 207 P P PG PPRC ++G G Sbjct: 1104 PSPKPGFPPRCACLSGYG 1121
>BDBC_CHLMU (Q9PKL7) Probable disulfide formation protein (Disulfide| oxidoreductase) (Thiol-disulfide oxidoreductase) Length = 135 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 261 LVGLVRSLCSCPFYWSWIASCLGT 332 ++ L+RS C Y++W+ SC+GT Sbjct: 1 MIKLLRSYC---LYFAWLVSCIGT 21
>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)| Length = 191 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -1 Query: 207 PRTCNYQASGRSPGLGFRLATKNG 136 P C++Q SG PG G R T +G Sbjct: 12 PAVCSFQKSGSCPGSGLRTFTIHG 35 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,287,699 Number of Sequences: 219361 Number of extensions: 855772 Number of successful extensions: 1988 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1988 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)