Clone Information

BLAST Search Result

Clone Name	rbaet94h09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1....	70	2e-12
2	UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	70	2e-12
3	UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	70	2e-12
4	UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	70	2e-12
5	UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	67	2e-11
6	UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1....	67	2e-11
7	FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2...	48	1e-05
8	FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-...	44	2e-04
9	FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	43	3e-04
10	FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2...	42	6e-04
11	GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (G...	42	0.001
12	GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	40	0.003
13	GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (G...	39	0.005
14	RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-...	36	0.041
15	ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA prote...	36	0.041
16	ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA prote...	36	0.041
17	GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-...	35	0.070
18	GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	35	0.092
19	GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	34	0.16
20	ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA prote...	34	0.16
21	EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-ga...	34	0.20
22	ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA prote...	34	0.20
23	Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF	33	0.27
24	GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	33	0.27
25	ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA prote...	33	0.27
26	ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA prote...	33	0.27
27	ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA prote...	33	0.27
28	FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271) (GDP-4...	33	0.35
29	ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA prote...	32	0.59
30	ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA prote...	32	0.59
31	Y1055_METJA (Q58455) Hypothetical protein MJ1055	32	0.78
32	GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	32	1.0
33	ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA prote...	32	1.0
34	Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL	31	1.3
35	ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA prote...	31	1.3
36	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	31	1.7
37	GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	31	1.7
38	YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'regio...	30	2.3
39	GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) ...	30	2.3
40	GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	30	2.3
41	CINA_BACHK (Q6HF34) CinA-like protein	30	2.3
42	CINA_BACCZ (Q636P5) CinA-like protein	30	2.3
43	CINA_BACC1 (Q732U5) CinA-like protein	30	2.3
44	CINA_BACAN (Q81WQ3) CinA-like protein	30	2.3
45	CAPI_STAAU (P39858) Protein capI	30	2.9
46	RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination prote...	30	2.9
47	ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA prote...	30	2.9
48	NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast pr...	30	3.8
49	HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82	30	3.8
50	TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)	30	3.8
51	TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)	30	3.8
52	CINA_BACCR (Q81A15) CinA-like protein	30	3.8
53	SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit	29	6.6
54	YKW2_YEAST (P35995) Putative 82.2 kDa transcriptional regulatory...	29	6.6
55	NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chlo...	29	6.6
56	GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (G...	29	6.6
57	ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f an...	29	6.6
58	UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Exci...	28	8.6
59	TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)	28	8.6
60	SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit	28	8.6
61	SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit	28	8.6
62	PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3)	28	8.6
63	EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact...	28	8.6
64	ACSA_PASMU (Q9CMW1) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (A...	28	8.6

>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           + P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP 
Sbjct: 318 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPV 377

Query: 271 VVLRDGLVLMEDDFRERL 218
           V L +GL      FR+ L
Sbjct: 378 VPLEEGLNKAIHYFRKEL 395

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>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           + P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP 
Sbjct: 318 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPV 377

Query: 271 VVLRDGLVLMEDDFRERL 218
           V L +GL      FR+ L
Sbjct: 378 VPLEEGLNKAIHYFRKEL 395

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>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           + P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP 
Sbjct: 318 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPV 377

Query: 271 VVLRDGLVLMEDDFRERL 218
           V L +GL      FR+ L
Sbjct: 378 VPLEEGLNKAIHYFRKEL 395

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>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           + P+N+GNP E T+LE A+ +K L+     +       DDP++RKPDI KAK +L WEP 
Sbjct: 318 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPV 377

Query: 271 VVLRDGLVLMEDDFRERL 218
           V L +GL      FR+ L
Sbjct: 378 VPLEEGLNKAIHYFRKEL 395

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>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 30/67 (44%), Positives = 43/67 (64%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           + P+N+GNP E T+LE A+ +K L+     +       DDP++R+PDI KAK +L WEP 
Sbjct: 316 SSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPV 375

Query: 271 VVLRDGL 251
           V L +GL
Sbjct: 376 VPLEEGL 382

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>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           + P+N+GNP E ++++ A  +K+L+     ++      DDP++RKPDI KAK +L WEP 
Sbjct: 319 SSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQRRKPDIRKAKLLLGWEPV 378

Query: 271 VVLRDGLVLMEDDFRERL 218
           V L +GL      FR+ L
Sbjct: 379 VPLEEGLNKTIHYFRKEL 396

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>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = -3

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +N+G+  E T+ ELAE VKE++  +  +    + PD   ++  D +K +E + W+PKV L
Sbjct: 250 VNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPL 308

Query: 262 RDGLVLMEDDFRERLAVPKK 203
           ++GLV     + E +   KK
Sbjct: 309 KEGLVETYKWYVENVISAKK 328

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>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -3

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +NIG+  E T+ ELAE VKE++  E  +      PD   ++  D +K    L W PKV L
Sbjct: 236 VNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS-LGWTPKVSL 294

Query: 262 RDGL 251
           RDGL
Sbjct: 295 RDGL 298

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>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2)
          Length = 347

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -3

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +N+G+  E T+ ELAE V+ ++  E  V      P+   +R  D  + ++ L WEP+V L
Sbjct: 266 VNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARRVVDSGRMRK-LGWEPRVAL 324

Query: 262 RDGL 251
           RDG+
Sbjct: 325 RDGI 328

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>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = -3

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +N+G+  E T+ ELAE VKE++  +  +      PD   ++  D +K    L W PK+ L
Sbjct: 250 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLAS-LGWTPKISL 308

Query: 262 RDGLVLMEDDFRERLAVPKK 203
           +DGL    + + E +   K+
Sbjct: 309 KDGLSQTYEWYLENVVQKKQ 328

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>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 30/86 (34%), Positives = 44/86 (51%)
 Frame = -3

Query: 445 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           P+NIG+    +M E+AE V    N ++ +      P+  R R  D T  KE L W P + 
Sbjct: 260 PVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMR 318

Query: 265 LRDGLVLMEDDFRERLAVPKKAKA*G 188
           L+DGL +     +E+L   +K KA G
Sbjct: 319 LKDGLRITYFWIKEQL---EKEKAEG 341

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>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 330

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           N+G    ++ LE+ E+ K++   ++  TM      DP     D TKA+ VL W+PK
Sbjct: 250 NLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKARTVLGWKPK 305

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>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = -3

Query: 445 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           P+NIG+    +M E+AE +    + E+ +      P+  R R  D T  KE L W P + 
Sbjct: 267 PVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPTMK 325

Query: 265 LRDGL 251
           L+DGL
Sbjct: 326 LKDGL 330

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>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose|
           2-epimerase)
          Length = 338

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -3

Query: 439 NIGNP--GEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           NIG       ++LEL + +++  N ++  T       D R    DI K    +DW PKV 
Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVS 323

Query: 265 LRDGLVLMED 236
            +DG+  M D
Sbjct: 324 AKDGVQKMYD 333

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>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659

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>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659

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>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 26/86 (30%), Positives = 42/86 (48%)
 Frame = -3

Query: 445 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           P+NIG+    +M E+AE V      ++ +      P+  R R  D    KE L W P + 
Sbjct: 266 PVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMR 324

Query: 265 LRDGLVLMEDDFRERLAVPKKAKA*G 188
           L++GL +     +E++   +K KA G
Sbjct: 325 LKEGLRITYFWIKEQI---EKEKAKG 347

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>GALE_LACCA (O84903) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 331

 Score = 35.0 bits (79), Expect = 0.092
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = -3

Query: 457 DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWE 278
           + +   NIG+   F+ LE+    +++   E+  TM      DP        KA+++L W+
Sbjct: 244 NKSSAFNIGSAHGFSNLEILNAARKVTGQEIPATMGPRRAGDPSTLIASSEKARDILGWK 303

Query: 277 P 275
           P
Sbjct: 304 P 304

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>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 334

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           +G  N+GN   F++ E+ E  +++    +   +      DP        KA+ +L WEPK
Sbjct: 245 SGSFNLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTILGWEPK 304

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>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A+  LDWEPK+ +++
Sbjct: 623 IRNARRCLDWEPKIDMQE 640

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>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose|
           4-epimerase) (Galactowaldenase)
          Length = 348

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -3

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVL 263
           +N G     ++ E+   ++E+   +V  T  +  P DP Q      + +E L W PK   
Sbjct: 257 MNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGADRIREQLGWVPKHDR 316

Query: 262 RDGLV 248
            DG+V
Sbjct: 317 LDGIV 321

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>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 654

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 19/80 (23%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENVKELINPEVTVTMTENTP------------------DDPRQR 320
           INIGNP  E+T+++L    K +IN   +     N P                   D  +R
Sbjct: 562 INIGNPHNEYTIMQLT---KIIINIIYSNNRNYNFPKFSGFNMLSGTNYYGEGYQDIDRR 618

Query: 319 KPDITKAKEVLDWEPKVVLR 260
           KP+I  AK++L+W PK  +R
Sbjct: 619 KPNIDIAKKLLNWTPKTKIR 638

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>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 23/79 (29%), Positives = 37/79 (46%)
 Frame = -3

Query: 451 TGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           T  INIG+ GE +++ELA  V  ++  +  +    + PD    RK   ++    + W PK
Sbjct: 235 TEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPDG-TPRKLLSSERLVSMGWRPK 293

Query: 271 VVLRDGLVLMEDDFRERLA 215
             L  GL    + F   +A
Sbjct: 294 TSLELGLAKSYESFVSNVA 312

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>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 332

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           N+G+   F+ L++ E  +++   E+     +  P DP        KA+ VL W+P+
Sbjct: 251 NLGSSTGFSNLQILEAARKVTGKEIPAEKADRRPGDPDILIASSEKARTVLGWKPQ 306

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>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 662

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = -3

Query: 334 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 194
           D   RKP I  A+ +LDW+P + LR+ +    D F       ++A+A
Sbjct: 616 DVAHRKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662

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>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+         D   RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  L WEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAERA 659

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>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 334 DPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           D   RKP I  A+  L WEP + +RD +    D F   + V ++A
Sbjct: 615 DVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659

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>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase)
          Length = 321

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -3

Query: 457 DNTGP----INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEV 290
           +NT P    IN+G   + T+ ELA+ + +++  +  V    + PD   ++  D+T+  + 
Sbjct: 234 ENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ- 292

Query: 289 LDWEPKVVLRDGL 251
           L W  ++ L  GL
Sbjct: 293 LGWYHEISLEAGL 305

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>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640

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>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHHCLDWEPKIDMQE 640

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>Y1055_METJA (Q58455) Hypothetical protein MJ1055|
          Length = 326

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 14/63 (22%), Positives = 33/63 (52%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           N+GN     ++   E +++ +N +           D  +   D++K++++L ++PKV + 
Sbjct: 247 NLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIE 306

Query: 259 DGL 251
           +GL
Sbjct: 307 EGL 309

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>GALE_STRLI (P13226) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 329

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/78 (25%), Positives = 32/78 (41%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           N+GN   F++ E+ E V+ +    +   M      DP         A+E L W P    R
Sbjct: 249 NLGNGNGFSVREVVETVRRVTGHPIPEIMAPRRGRDPAVLVASAGTAREKLGWNPS---R 305

Query: 259 DGLVLMEDDFRERLAVPK 206
             L ++ D +    + PK
Sbjct: 306 ADLAIVSDAWEWHSSHPK 323

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>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++        D   RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSCYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640

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>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL|
          Length = 356

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = -3

Query: 313 DITKAKEVLDWEPKVVLRDGL 251
           DITKA++VL + PK+ LR+G+
Sbjct: 322 DITKARKVLGYAPKIALREGM 342

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>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 668

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 19/81 (23%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAENVKELINPEVTVTMTENTP------------------DDPRQR 320
           INIGNP  E ++ +L E   EL+       +  N P                   D   R
Sbjct: 565 INIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPPFAGFRDVESKAFYGAGYQDVEHR 621

Query: 319 KPDITKAKEVLDWEPKVVLRD 257
           KP I  AK +L+WEP V + +
Sbjct: 622 KPSIDNAKRLLNWEPTVEMSE 642

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -1

Query: 285 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 112
           T SP +S+ T  CS  T SG +WQC   P P   S++  A+I+   E  +   G   +V
Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451

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>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 333

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           N+G+   F+ L++ E  +++   ++          DP        KA+EVL W+P+
Sbjct: 252 NLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREVLGWKPQ 307

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>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)|
          Length = 334

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/63 (22%), Positives = 29/63 (46%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           NIGN     +++  + +++ +  E    M    P D  +   D     EV+ + P+  ++
Sbjct: 259 NIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDVLETSADTKALYEVIGFTPETTVK 318

Query: 259 DGL 251
           DG+
Sbjct: 319 DGV 321

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>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase 1) (GMD 1)
          Length = 361

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 340 PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 197
           P +    K D +KAKE+L W+PKV     + +M D   E L + K+ K
Sbjct: 303 PTEVDNLKGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347

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>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 339

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           N+G    +++LE+ +  +++   EV     +  P D      D  KAK  L WE K
Sbjct: 259 NLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATCFADPAKAKRELGWEAK 314

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>CINA_BACHK (Q6HF34) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

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>CINA_BACCZ (Q636P5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

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>CINA_BACC1 (Q732U5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

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>CINA_BACAN (Q81WQ3) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -3

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398

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>CAPI_STAAU (P39858) Protein capI|
          Length = 334

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 15/72 (20%), Positives = 32/72 (44%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLR 260
           NIGN     ++E  E ++  +  E      +  P D  +   ++      +D++P+  ++
Sbjct: 259 NIGNNSPVRLMEFVEAIENKLGKEARKNYMDLQPGDVPETYANVDDLFRDIDFKPETTIQ 318

Query: 259 DGLVLMEDDFRE 224
           DG+    D + E
Sbjct: 319 DGVNKFVDWYLE 330

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>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)|
          Length = 234

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = -1

Query: 312 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 163
           T  + R+ L G  ++ + T   S+R    +           WQ   +P P+  SL L ++
Sbjct: 62  TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119

Query: 162 TNLPEHTHSWVGSSIFV 112
             +PE  H +  SS+F+
Sbjct: 120 QRIPETPHPYFFSSMFL 136

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>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 16/77 (20%)
 Frame = -3

Query: 442 INIGNP-GEFTMLELAE---------NVKELINPEVTVTMTENTP------DDPRQRKPD 311
           INIGNP  E ++ +LAE          +++   P       E+         D   RKP 
Sbjct: 563 INIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLR 260
           I  A+ +LDW+P + ++
Sbjct: 623 IKNAERLLDWKPTIDMK 639

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>NIR_SPIOL (P05314) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1)
          Length = 594

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = -3

Query: 445 PINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVV 266
           P+N   P   T+L  + N +   N  +      +   +     P +  A+     EP+V 
Sbjct: 5   PVNKIIPSSTTLLSSSNNNRRRNNSSIRCQKAVSPAAETAAVSPSVDAAR----LEPRVE 60

Query: 265 LRDGLVLMEDDFRERLAVPKKAK 197
            RDG  +++++FR  +   +K K
Sbjct: 61  ERDGFWVLKEEFRSGINPAEKVK 83

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>HSP82_ASHGO (Q8J2M3) Heat shock protein HSP82|
          Length = 704

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/69 (27%), Positives = 32/69 (46%)
 Frame = -3

Query: 406 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           ++ ENVKEL     T  +    P +  Q + +        DWE  + ++   V  + +FR
Sbjct: 254 KVKENVKELEELNKTKPLWTRNPSEVTQEEYNAFYKSISNDWEDPLAVKHFSVEGQLEFR 313

Query: 226 ERLAVPKKA 200
             L +PK+A
Sbjct: 314 AILFIPKRA 322

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>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 310 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 167
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 166 H 164
           H
Sbjct: 646 H 646

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>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 310 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 167
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 166 H 164
           H
Sbjct: 646 H 646

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>CINA_BACCR (Q81A15) CinA-like protein|
          Length = 412

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -3

Query: 403 LAENVKELINPEVTVTMTENT-PDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVK+++  ++ ++ T    PD   Q++P        +  EP VV    L       R
Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERTA 398

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>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit|
          Length = 940

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -3

Query: 304 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 203
           KAKE+ + +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329

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>YKW2_YEAST (P35995) Putative 82.2 kDa transcriptional regulatory protein in|
           FRE2 5'region
          Length = 705

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -1

Query: 189 ATSLRLAYITNLPEHTHSWVGSSIFVAVFRYGI*APINQLHLCRSLERLYY 37
           AT   +  ++NL   TH          +F + + AP+N LHLC ++   Y+
Sbjct: 463 ATLHMIGSLSNLYTLTHQ----DFDARIFNFSVLAPLNSLHLCFNVLETYF 509

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>NU2C_MARPO (P06257) NAD(P)H-quinone oxidoreductase chain 2, chloroplast (EC|
           1.6.5.-) (NAD(P)H dehydrogenase, chain 2)
           (NADH-plastoquinone oxidoreductase chain 2)
          Length = 501

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +3

Query: 291 TSFAFVMSGFLWR-GSSGVFSVIVTVTSGLINSFTFSASSSMV 416
           TS + +  GF W  G SG  + I  +T+GL+N+ T+++S + +
Sbjct: 172 TSSSILAYGFSWLYGLSGGETNIQKITNGLLNAETYNSSGTFI 214

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>GMDS_HUMAN (O60547) GDP-mannose 4,6 dehydratase (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase) (GMD)
          Length = 372

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 388 KELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKV 269
           KE     VTV +    P +    + D TKAK+ L+W+P+V
Sbjct: 310 KETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRV 349

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>ITA6_MOUSE (Q61739) Integrin alpha-6 precursor (VLA-6) (CD49f antigen)|
           [Contains: Integrin alpha-6 heavy chain; Integrin
           alpha-6 light chain]
          Length = 1091

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = -3

Query: 433 GNPGEFTMLELAENVKELINP-------EVTVTMTENTPDDPRQRKPDITKAKEVLDWEP 275
           GN  +F+ L + + + EL+         E+TVT + + P +PR+   D  +AK +  +  
Sbjct: 647 GNQDKFSYLPIQKGIPELVLKDQKDIALEITVTNSPSDPRNPRKDGDDAHEAKLIATFPD 706

Query: 274 KVVLRDGLVLMEDDFRERLAVPKK 203
                    L    +RE  A P+K
Sbjct: 707 --------TLTYSAYRELRAFPEK 722

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>UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 594

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -3

Query: 406 ELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLME 239
           E++E   + +  E+T  +     D   Q +  + KA E LD+E    LRD +  ME
Sbjct: 174 EVSEETNQTMVNEITKFLKNGHSDIKEQLRERMEKAAEDLDFERAKELRDTIAQME 229

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>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
 Frame = -3

Query: 439 NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDIT----KAKEV--LDWE 278
           NIG   E ++++LA+ + +LI    + +  EN  D    R  +      K++++  L W 
Sbjct: 256 NIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWR 315

Query: 277 PKVVLRDGLVLMEDDFRE 224
           PKV  ++G+    + +RE
Sbjct: 316 PKVPWKEGIKKTIEWYRE 333

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>SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit|
          Length = 949

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 304 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 203
           KAKE+   +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRR 329

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>SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit|
          Length = 949

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 304 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 203
           KAKE+   +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRR 329

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>PGK_TETTH (P50313) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 420

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 412 MLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPKVVLRDGLVLM 242
           +L+  EN + L+  +  V + E    DP + +  +   K++L+  PK     GLVLM
Sbjct: 11  ILKHIENKRVLMRVDFNVPLKEGKVKDPTRIQGSVPSIKKILEQNPK-----GLVLM 62

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>EXOB_RHIME (P26503) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
          Length = 328

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = -3

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDDPRQRKPDITKAKEVLDWEPK 272
           +N+G     T+ EL + ++++      +   E    D      +  KA++VL WEP+
Sbjct: 251 LNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQVLGWEPQ 307

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>ACSA_PASMU (Q9CMW1) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 653

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -2

Query: 281 GAQGRPT*RLGAHGGRLPGAFGSAQEGQGLRPLPCVWRTSPICQSILIVGWVRQYSLLCF 102
           G+ G+P   + + GG L GA  S +     +P    W T+        VGW+  +S +C+
Sbjct: 269 GSTGKPKGIVHSTGGYLLGALNSFRNVFDNKPNDIFWCTAD-------VGWITGHSYVCY 321


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,766,270
Number of Sequences: 219361
Number of extensions: 1423127
Number of successful extensions: 4026
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 3921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4020
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result