ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet94h08 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 61.2 bits (147), Expect = 9e-10 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMF-EAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIV 246 GGKVI+I++VV + E Q + D+ ++ F G +R E +W +F++AG+SDY+I+ Sbjct: 293 GGKVIIINMVVGAGPSDMKHKEMQAIFDVYIM-FINGMERDEQEWSKIFSEAGYSDYRII 351 Query: 245 KRLGARGVIEVY 210 LG R +IEVY Sbjct: 352 PVLGVRSIIEVY 363
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 52.8 bits (125), Expect = 3e-07 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLG-PVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIV 246 GGKVI+ID+VV + + E Q D+ M+ + ++R+ ++W L + AGF+ YK+ Sbjct: 284 GGKVIIIDVVVGVNHDVDEVLEDQLHFDMAMMSYFNAKERTMNEWEKLISAAGFTSYKLT 343 Query: 245 KRLGARGVIEVY 210 G R +IE Y Sbjct: 344 PAFGVRSLIEAY 355
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 52.8 bits (125), Expect = 3e-07 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLG-PVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIV 246 GGKVI+ID+VV + + E Q D+ M+ + ++R+ S+W L AGF YK+ Sbjct: 285 GGKVIIIDVVVGVNHDIDEVLEDQLHFDMAMMCYFNAKERTMSEWEKLIYDAGFKSYKLT 344 Query: 245 KRLGARGVIEVY 210 G R +IE Y Sbjct: 345 PAFGVRSLIEAY 356
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 50.4 bits (119), Expect = 2e-06 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GGKVI++D+ ++ + + ++DI MLV T G++R++ W + AGFS KI Sbjct: 279 GGKVIIVDVALDEESDHELSSTRLILDIDMLVNTGGKERTKEVWEKIVKSAGFSGCKIRH 338 Query: 242 RLGARGVIEVY 210 + VIEV+ Sbjct: 339 IAAIQSVIEVF 349
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GGKVI++DIV+ + + +D+ M++ T G++R+E +W L AG+ +KI + Sbjct: 275 GGKVIIVDIVLNVQSEHPYTKMRLTLDLDMMLNTGGKERTEEEWKKLIHDAGYKGHKITQ 334 Query: 242 RLGARGVIEVY 210 + VIE Y Sbjct: 335 ITAVQSVIEAY 345
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = -1 Query: 419 GKVIVIDIVVEPSLGP-VMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GKV +ID+V++ + + + LMD+ M G++R+E +W LF +AGF YKI Sbjct: 282 GKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGFQHYKISP 340 Query: 242 RLGARGVIEVY 210 G +IE+Y Sbjct: 341 LTGFLSLIEIY 351
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 47.8 bits (112), Expect = 1e-05 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = -1 Query: 419 GKVIVIDIVVEPSLGP-VMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GKV +ID+V++ + + + LMD+ M G++R+E +W LF +AGF YKI Sbjct: 282 GKVTIIDMVIDEKKDENQVTQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGFQHYKISP 340 Query: 242 RLGARGVIEVY 210 G +IE+Y Sbjct: 341 LTGFLSLIEIY 351
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 47.4 bits (111), Expect = 1e-05 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Frame = -1 Query: 419 GKVIVIDIVV-EPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GKV +ID+V+ E + + + LMD+ M G++R+E +W LF +AGF YKI Sbjct: 282 GKVTIIDMVINEKKDENQVTQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGFQHYKISP 340 Query: 242 RLGARGVIEVY 210 G +IE+Y Sbjct: 341 LTGFLSLIEIY 351
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 45.8 bits (107), Expect = 4e-05 Identities = 21/71 (29%), Positives = 43/71 (60%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GGKVI+++IVV+ P+ A+ M + M++ + G++R++ +W L KA F+ ++++ Sbjct: 281 GGKVILVEIVVDTENLPLFTSARLSMGMDMMLMS-GKERTKKEWEDLLRKANFTSHQVIP 339 Query: 242 RLGARGVIEVY 210 + +I Y Sbjct: 340 IMAIESIIVAY 350
>HIOM_MACMU (Q8HZJ0) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 345 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GG +++ ++ E GP++ + L + MLV T G++R+ + +H+L + AGF D++ K Sbjct: 277 GGILVIESLLDEDRRGPLLTQ---LYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF-K 332 Query: 242 RLGA 231 + GA Sbjct: 333 KTGA 336
>HIOM_HUMAN (P46597) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 345 Score = 40.0 bits (92), Expect = 0.002 Identities = 21/64 (32%), Positives = 40/64 (62%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GG +++ ++ E GP++ + L + MLV T G++R+ + +H+L + AGF D++ K Sbjct: 277 GGILVIESLLDEDRRGPLLTQ---LYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF-K 332 Query: 242 RLGA 231 + GA Sbjct: 333 KTGA 336
>CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (EC 2.1.1.-)| (Chalcone O-methyltransferase) (ChOMT) Length = 372 Score = 39.3 bits (90), Expect = 0.004 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = -1 Query: 419 GKVIVIDIVV--EPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIV 246 GKVI+++ ++ EP+ TL D LM + GR+R+E + L +GFS +++ Sbjct: 300 GKVIIVEFILPEEPNTSEESKLVSTL-DNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 Query: 245 KR-LGARGVIEVYK 207 R + GV+E YK Sbjct: 359 CRAFNSLGVMEFYK 372
>HIOM_BOVIN (P10950) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 345 Score = 32.7 bits (73), Expect = 0.36 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = -1 Query: 422 GGKVIVIDIVVEPS-LGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYK 252 GG ++VI+ +++ GP+ L + MLV T GR+R+ +++ L AGF D + Sbjct: 276 GGGILVIESLLDTDGRGPL---TTLLYSLNMLVQTEGRERTPAEYRALLGPAGFRDVR 330
>IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)| Length = 365 Score = 32.7 bits (73), Expect = 0.36 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTL--MDILMLVFTRG-RQRSESDWHVLFTKAGFSDYK 252 GGK+I+++ ++ P + E+ + +D LV +G ++RS+ D+ L +K GFS Sbjct: 291 GGKIILVESLI-PVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVD 349 Query: 251 IVKRLGARGVIEVYK 207 ++ V+E+YK Sbjct: 350 VICCAYDTWVMELYK 364
>HIOM_CHICK (Q92056) Hydroxyindole O-methyltransferase (EC 2.1.1.4) (HIOMT)| (Acetylserotonin O-methyltransferase) (ASMT) Length = 346 Score = 32.0 bits (71), Expect = 0.61 Identities = 23/63 (36%), Positives = 36/63 (57%) Frame = -1 Query: 422 GGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVK 243 GG ++V ++ E GPV E Q L + MLV T G++R+ ++ L AGF + + V+ Sbjct: 278 GGVLLVESLLSEDRSGPV--ETQ-LYSLNMLVQTEGKERTAVEYSELLGAAGFREVQ-VR 333 Query: 242 RLG 234 R G Sbjct: 334 RTG 336
>COMT1_SACOF (O82054) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 362 Score = 31.6 bits (70), Expect = 0.79 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = -1 Query: 419 GKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTR---GRQRSESDWHVLFTKAGFSDYK 252 GKVI+++ V+ + V +AQ + + M++ GR+R E ++H L AGFS +K Sbjct: 290 GKVIIVECVLPVNTEAVP-KAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFK 347
>DMPM_STRMI (P42712) O-demethylpuromycin-O-methyltransferase (EC 2.1.1.38)| Length = 376 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/56 (26%), Positives = 30/56 (53%) Frame = -1 Query: 416 KVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKI 249 +++V+++++ ++ L D+ MLV GR+RSE D L + GF ++ Sbjct: 304 RLLVVEVLLPDTVDSSAHPLGYLSDLYMLVNMGGRERSERDLRSLLSDTGFRTTRV 359
>IL12A_RAT (Q9R103) Interleukin-12 alpha chain precursor (IL-12A) (Cytotoxic| lymphocyte maturation factor 35 kDa subunit) (CLMF p35) Length = 215 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = -2 Query: 373 QSCLRRRL*WTYSCLSSREAVSVVKVTGMCYSPKQGSAIIKLSKDWVHEVLSRSTSE 203 ++CL L SCL+++E S+++ G C P++ S ++ L ++E L SE Sbjct: 79 EACLPLELHKNESCLATKETSSIIR--GSCLPPQKTSLMMTLCLGSIYEDLKMYQSE 133
>POLG_MCFA (P33515) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3341 Score = 28.9 bits (63), Expect = 5.1 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -2 Query: 274 KQGSAIIKLSKDWVHEVLSRSTSERFLKSPPKEYPDVPLHAVCFVYVWMVCF 119 + SA+ LS EV R T+ER L V + CF+ VW +CF Sbjct: 2058 RTASALWDLSDVMNGEVRDRYTTERSLTVVMAFVLGVSIMLSCFIAVWALCF 2109
>CAT5_YEAST (P41735) Catabolite repression protein CAT5 (Ubiquinone| biosynthesis protein COQ7) (Coenzyme Q biosynthesis protein 7) Length = 233 Score = 28.5 bits (62), Expect = 6.7 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +3 Query: 333 HEYVHQSLRLKHDWS*RWFHHNVYDN 410 H Y H LKH W HHN ++N Sbjct: 79 HRYPHLKPVLKHIWDQEIHHHNTFNN 104
>RPOC_CHRVO (Q7NQE7) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1396 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = -1 Query: 419 GKVIVIDIVVEPSLGPVMFEAQTLMD 342 G+V +D VV+PS G + EA TLMD Sbjct: 841 GRVTAVD-VVDPSTGETVIEAGTLMD 865
>TCMN_STRGA (P16559) Multifunctional cyclase-dehydratase-3-O-methyl transferase| tcmN Length = 494 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = -1 Query: 416 KVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGF 264 ++++ D V+ P ++ L+DI MLV GR+R ++W L +A F Sbjct: 429 RLLIFDQVMAPENE---WDHAKLLDIDMLVLFGGRERVLAEWRQLLLEADF 476 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,928,899 Number of Sequences: 219361 Number of extensions: 1330606 Number of successful extensions: 3076 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3074 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
