ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet94h06 |
|---|---|
| Clone Library Name | barley_pub |
>YMWB_CAEEL (Q09385) Hypothetical protein K04G7.11| Length = 234 Score = 72.0 bits (175), Expect = 5e-13 Identities = 34/101 (33%), Positives = 66/101 (65%), Gaps = 2/101 (1%) Frame = -2 Query: 412 DMDAYNRAKDT--DPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKF 239 D+D+Y + ++ +FY A +L +G +D++ ++ + ++R+ + RRR + Sbjct: 135 DLDSYKKMRECVGGEQFYPTADTLIHGNHYPTTAA-MDKLTKDVHGQVKRREQYHRRRLY 193 Query: 238 NEDKDVDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTAL 116 + D +D IN++N+ FNKK+++ +GKYT +IK++LERGTA+ Sbjct: 194 DPDAPIDYINEKNKKFNKKLDKYYGKYTEDIKDDLERGTAI 234
>SYF2_SCHPO (O59733) Pre-mRNA-splicing factor syf2| Length = 229 Score = 67.8 bits (164), Expect = 1e-11 Identities = 33/93 (35%), Positives = 59/93 (63%) Frame = -2 Query: 394 RAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDS 215 ++K Y EA L + ++ + +++R+V +K++D++R ++RR +E+ + Sbjct: 138 KSKSRSVALYDEAERLDWVS-NKPDKEHVERLVESIKKQDQRRLKNTKRRGTDEEDHITF 196 Query: 214 INDRNEHFNKKIERAFGKYTLEIKNNLERGTAL 116 IN+RN FN K++R + KYT +IK +LERGTAL Sbjct: 197 INERNRKFNLKLQRFYSKYTKDIKEDLERGTAL 229
>SYF2_MAGGR (Q521C0) Pre-mRNA-splicing factor SYF2| Length = 340 Score = 67.0 bits (162), Expect = 2e-11 Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 4/96 (4%) Frame = -2 Query: 391 AKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDE----KRKAFSRRRKFNEDKD 224 A D FY S + K ++ + IDR+VN++K+ ++ KRKA R K ED D Sbjct: 248 AVDRAGTFYSTTDSTDFAK-NKPDKEAIDRLVNDMKKAEDVAAKKRKA--RMAKNGEDDD 304 Query: 223 VDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTAL 116 V IND+N+ FN+K+ R + KYT EI+ + ERGT + Sbjct: 305 VTYINDKNKQFNQKLARFYNKYTAEIRESFERGTMI 340
>SYF2_NEUCR (Q7RZK5) Pre-mRNA-splicing factor syf-2| Length = 339 Score = 61.6 bits (148), Expect = 7e-10 Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = -2 Query: 391 AKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFN--EDKDVD 218 A D D F+ A S Q+ + + + +DR+V ++++ +E R R N +D DV Sbjct: 247 AIDKDGTFFSTADSTQFAQ-HKPDKAAVDRLVADMRKAEEASLKKRRERMANNGDDADVT 305 Query: 217 SINDRNEHFNKKIERAFGKYTLEIKNNLERGT 122 IN++N+ FN+K+ R + KYT EI+++ ERGT Sbjct: 306 YINEKNKQFNQKLSRFYNKYTAEIRDSFERGT 337
>SYF2_EMENI (Q5BC69) Pre-mRNA-splicing factor syf2| Length = 297 Score = 61.6 bits (148), Expect = 7e-10 Identities = 34/93 (36%), Positives = 58/93 (62%), Gaps = 1/93 (1%) Frame = -2 Query: 391 AKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSR-RRKFNEDKDVDS 215 A D + FY A ++ + + S+ +D++V +L++ +E R R RR +ED DV Sbjct: 206 AVDKNGTFYSTADTIGFTE-SKPDRAAVDKLVADLRKAEEVRLKKRRDRRGGDEDGDVTY 264 Query: 214 INDRNEHFNKKIERAFGKYTLEIKNNLERGTAL 116 IN++N+ FN+K+ R + KYT EI+++ ERGT + Sbjct: 265 INEKNKQFNQKLARFYNKYTTEIRDSFERGTMI 297
>SYF2_YARLI (Q6CFW4) Pre-mRNA-splicing factor SYF2| Length = 195 Score = 57.8 bits (138), Expect = 1e-08 Identities = 28/65 (43%), Positives = 45/65 (69%) Frame = -2 Query: 310 IDRMVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIERAFGKYTLEIKNNLE 131 +DR+VN L + D++R R++ +D+ I+D+N+ FN+K+ R + KYT EI++N E Sbjct: 132 LDRLVNGLTKGDKQRMK-RRKQAGADDQHATYISDKNKQFNEKLNRQYDKYTKEIRDNFE 190 Query: 130 RGTAL 116 RGTAL Sbjct: 191 RGTAL 195
>SYF2_ASPFU (Q4WPM6) Pre-mRNA-splicing factor syf2| Length = 480 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/90 (30%), Positives = 54/90 (60%) Frame = -2 Query: 391 AKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDSI 212 A D + FY A ++ + + ++ +D++V +L++ +E R R R+ +E+ DV I Sbjct: 210 AVDKNGTFYSTADTIGFTE-NKPDRAGVDKLVADLRKAEEVRLKKRRERRGDEEPDVTYI 268 Query: 211 NDRNEHFNKKIERAFGKYTLEIKNNLERGT 122 N++N+ FN+K+ R + K L + +N++ GT Sbjct: 269 NEKNKQFNQKLARFYNKCYL-LWSNIQSGT 297
>SYF2_DEBHA (Q6BVE0) Pre-mRNA-splicing factor SYF2| Length = 231 Score = 42.4 bits (98), Expect = 5e-04 Identities = 26/89 (29%), Positives = 52/89 (58%), Gaps = 5/89 (5%) Frame = -2 Query: 418 EVDMDAYNRAKDTDPEFYREASSLQYGKV----SRVAEPNIDRMVNELKERDEKRKAFSR 251 +VD + Y++ K+ + + + LQ K+ S+ + + +R+V ++E + +R R Sbjct: 143 KVDKETYDQQKNAINK-NKSGNQLQMSKILPVSSKPSAADTNRLVRNIEEANNRR--MKR 199 Query: 250 RRKFNEDKDVDS-INDRNEHFNKKIERAF 167 RR +++ DV+S IND+N+ FN K+ R + Sbjct: 200 RRNKDDENDVNSYINDKNKQFNLKLNRQY 228
>SYF2_KLULA (Q6CPI4) Pre-mRNA-splicing factor SYF2| Length = 221 Score = 38.5 bits (88), Expect = 0.007 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Frame = -2 Query: 340 GKVSRVAEPN-IDRMVNELKERDEKRKAFSRRRKFNEDK---DVDSINDRNEHFNKKIER 173 GKV P +++MVN+L ER +KR +++ ++K D IND+N+ FN K+ Sbjct: 159 GKVQVEDNPELVEKMVNDLNERSKKRYMVRKQKLDKQNKINLDDGFINDKNKRFNAKLNS 218 Query: 172 AF 167 F Sbjct: 219 EF 220
>SYF2_ASHGO (Q753K4) Pre-mRNA-splicing factor SYF2| Length = 192 Score = 38.1 bits (87), Expect = 0.009 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = -2 Query: 340 GKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNED---KDVDSINDRNEHFNKKIERA 170 GKV EP + + ++ KR+ R++K +D S+ND+N HFN+K++R Sbjct: 127 GKVVLDDEPELVEKLAAAVQQTAKRRHEERQKKAAKDGGRATAGSLNDKNRHFNEKLDRE 186 Query: 169 FGK 161 F K Sbjct: 187 FRK 189
>SYF2_YEAST (P53277) Pre-mRNA-splicing factor SYF2 (Synthetic lethal with CDC40| protein 2) (PRP19 complex protein 31) Length = 215 Score = 32.0 bits (71), Expect = 0.61 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 7/62 (11%) Frame = -2 Query: 337 KVSRVAEPNIDRMVNELK---ERDEKRKAFSRRRKFNEDKDV----DSINDRNEHFNKKI 179 K ++ + D++VN+L + + K++ +R+R+ K + IND+N+ FN+K+ Sbjct: 148 KTGKITIADDDKLVNKLAVSLQSESKKRYEARKRQMQNAKTLYGVESFINDKNKQFNEKL 207 Query: 178 ER 173 R Sbjct: 208 SR 209
>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box protein SMC2)| Length = 1170 Score = 32.0 bits (71), Expect = 0.61 Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Frame = -2 Query: 313 NIDRMVNELKERDEKRKAFSRRR---KFNEDKDVDSINDRNEHFNKKIERAFGKYTLEIK 143 N+++++ +L+++ E + F R K NE D+D+ +R++ N+K + K I Sbjct: 928 NMEKIIEDLRQKHEFLEDFDLVRNIVKQNEGIDLDTYRERSKQLNEKFQELRKKVNPNIM 987 Query: 142 NNLE 131 N +E Sbjct: 988 NMIE 991 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/83 (21%), Positives = 43/83 (51%), Gaps = 3/83 (3%) Frame = -2 Query: 379 DPEFYREASSL---QYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDSIN 209 D + YRE S ++ ++ + PNI M+ +++++ K + + ++ K ++I+ Sbjct: 960 DLDTYRERSKQLNEKFQELRKKVNPNIMNMIENVEKKEAALKTMIKTIEKDKMKIQETIS 1019 Query: 208 DRNEHFNKKIERAFGKYTLEIKN 140 NE+ + + + + K TL+ N Sbjct: 1020 KLNEYKRETLVKTWEKVTLDFGN 1042
>ANR12_HUMAN (Q6UB98) Ankyrin repeat domain-containing protein 12 (Ankyrin| repeat-containing cofactor 2) (GAC-1 protein) Length = 2062 Score = 31.6 bits (70), Expect = 0.80 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -2 Query: 412 DMDAYNRAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNEL----KERDEKRKAFSRRR 245 ++D +++D + + +Q K S + + N + L K +DE K + Sbjct: 957 ELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKE 1016 Query: 244 KFNEDKDVDSINDRNEHFNK 185 K +DKD+D +R++H +K Sbjct: 1017 KDKKDKDIDRYKERDKHKDK 1036
>CUT_CAEEL (Q9BL02) Homeobox protein cut-like ceh-44 (Homeobox protein 44)| Length = 1273 Score = 31.2 bits (69), Expect = 1.0 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -2 Query: 337 KVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNE--DKDVDSINDRNEHFNKKIERAFG 164 +V + AE ++ + EL EK K + NE +K++DS+ +N+ +K+E A Sbjct: 170 EVEKKAEQELNDRLTELIAEKEKMK------EQNEILEKNMDSLESKNKDIQRKLEIA-- 221 Query: 163 KYTLEIKNNLE 131 K T+E K+ LE Sbjct: 222 KQTVEQKDGLE 232
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = -2 Query: 307 DRMVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNE 197 D+ ++ K+RD KR++ SR RK D+D + DR E Sbjct: 284 DKEKDKDKDRDRKRRSRSRERKRERDRDREKKEDRVE 320
>CASP_CAEEL (Q8IA98) Protein CASP| Length = 621 Score = 31.2 bits (69), Expect = 1.0 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -2 Query: 337 KVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNE--DKDVDSINDRNEHFNKKIERAFG 164 +V + AE ++ + EL EK K + NE +K++DS+ +N+ +K+E A Sbjct: 170 EVEKKAEQELNDRLTELIAEKEKMK------EQNEILEKNMDSLESKNKDIQRKLEIA-- 221 Query: 163 KYTLEIKNNLE 131 K T+E K+ LE Sbjct: 222 KQTVEQKDGLE 232
>RRF_ZYMMO (Q9X5F0) Ribosome recycling factor (Ribosome-releasing factor)| (RRF) Length = 185 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -2 Query: 385 DTDPEFYREASSL--QYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDSI 212 D E +E + L QY + +R+A N+ R N+ ++DEK+ S K + +V + Sbjct: 104 DLTEERRKELAKLVGQYSEKARIAVRNVRRDGNDQIKQDEKKNEISEDEKKRFENEVQKL 163 Query: 211 NDR 203 D+ Sbjct: 164 TDK 166
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 30.8 bits (68), Expect = 1.4 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 12/86 (13%) Frame = -2 Query: 418 EVDMDAYNRAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNEL------------KERD 275 E D +R ++ +P R + S + + SR E + E K+RD Sbjct: 230 ERDRRERSREREKEPRERRRSRSRERRRKSRSREKEERKRTREKSKDKDKEKDKDNKDRD 289 Query: 274 EKRKAFSRRRKFNEDKDVDSINDRNE 197 KR++ SR RK D+D + +R E Sbjct: 290 RKRRSRSRERKRERDRDREKKEERVE 315
>PRIM_THEMA (Q9X1G3) DNA primase (EC 2.7.7.-)| Length = 565 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -2 Query: 379 DPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNED 230 D YR + +YGK R+ E R V EL E+ ++ K + + R F+E+ Sbjct: 93 DLSLYRTEGTSEYGKYIRLYEETWKRYVKEL-EKSKEAKDYLKSRGFSEE 141
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = -2 Query: 298 VNELKERDEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIERAFGKYTLEIKNNLE 131 VNE E ++K+K + +RK + +K+V + D+ E E A K E KN E Sbjct: 1295 VNEQLEEEKKQKESNEKRKVDLEKEVSELKDQIEE-----EVASKKAVTEAKNKKE 1345
>CF152_RAT (Q5U2Y9) Protein C6orf152 homolog| Length = 727 Score = 30.4 bits (67), Expect = 1.8 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 26/119 (21%) Frame = -2 Query: 418 EVDMDAYNRAKDTDPEFYREASSLQYGKVSRVAE---------------------PNIDR 302 E + A R KDT+ E +R SLQ K+ +++E N +R Sbjct: 184 EKERMAEKRVKDTEGELFRTKFSLQ--KLKKISEARHLPERDDLAKKLVSAELKLDNTER 241 Query: 301 MVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIERAFGKY-----TLEIKN 140 + EL + E +R+ E K +D N+ K+++R K L+IKN Sbjct: 242 KIKELSKNLELSTNSFQRQLLAERKRAFEAHDENKILQKELQRLHHKLKEKEKELDIKN 300
>RAD50_THEVO (P58302) DNA double-strand break repair rad50 ATPase| Length = 895 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -2 Query: 343 YGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIERAFG 164 YG+ + E +I++ NE+K+ DE+RK ++ K +D IN K +ER Sbjct: 474 YGEEASRLEEDINKTENEIKKLDEERK--------HQKKLLDRIN------GKDVERLIA 519 Query: 163 KYTL 152 Y L Sbjct: 520 SYNL 523
>TRHY_SHEEP (P22793) Trichohyalin| Length = 1549 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -2 Query: 394 RAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNE----LKERDEKRKAFSRRRKFNEDK 227 R ++ D +F RE L + ++ DR E L+ER+E+ + R RKF E++ Sbjct: 1017 RRQERDRKF-REEEQLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQERDRKFREEE 1075 Query: 226 DVDSINDRNEHFNKKIERAF 167 + +R + ++ R F Sbjct: 1076 QQLRLLEREQQLRQERNRKF 1095
>GRPE2_BUCAP (Q8K9V9) Protein grpE 2 (HSP-70 cofactor 2)| Length = 188 Score = 29.3 bits (64), Expect = 3.9 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Frame = -2 Query: 397 NRAKDTDPEFYREASSLQYGKVSRVAEPNI-DRMVNELKERDEKRKAFSRRRKFNEDKDV 221 N+ K T+ + + + L+ K + E ++ +NE++E+ K K K ++ Sbjct: 3 NQEKKTNYQNTDKENDLEKNKEKKNDESIFQNKKMNEIREKIFKNKKEINNLKLRHLANI 62 Query: 220 DSINDRNEHFNKKIERA----FGKYTLEIKNNLE 131 ++I E KKI+ A F K + I NNLE Sbjct: 63 ENIKKNTEKKIKKIKNAEIENFFKQIIPIINNLE 96
>YMPB_CAEEL (Q7Z118) Hypothetical protein B0361.11 in chromosome III| Length = 534 Score = 29.3 bits (64), Expect = 3.9 Identities = 17/61 (27%), Positives = 30/61 (49%) Frame = -2 Query: 334 VSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIERAFGKYT 155 +SR + D M +E +E + K+K+ R +K + DK V++ A+GKY Sbjct: 3 ISRRSYEQFDEMKSENQENNSKKKSSERLKKLDPDKFVEAYG------------AYGKYQ 50 Query: 154 L 152 + Sbjct: 51 I 51
>SNWA_DICDI (P54705) Protein snwA| Length = 685 Score = 29.3 bits (64), Expect = 3.9 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Frame = -2 Query: 412 DMDAYN-RAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELK-----ERDEKRKAFSR 251 D D Y+ R D+D + ++S + +V R + ++R ++ ER+ + +A + Sbjct: 483 DRDRYSKRRSDSDSDSDSDSSDSEDERVRRERKEKLERDKIRMEKKRELEREYRLEASGK 542 Query: 250 RRKFNEDKDVD 218 + KFN D+D D Sbjct: 543 KSKFNRDQDRD 553
>MIX1_CAEEL (Q09591) Mitotic chromosome and X-chromosome-associated protein mix-1| (Structural maintenance of chromosome 2) (Lethal protein 29) Length = 1244 Score = 29.3 bits (64), Expect = 3.9 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 9/80 (11%) Frame = -2 Query: 394 RAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRK---------AFSRRRK 242 +AK D + + S + GK+++ + I +R+EK K A +R+ Sbjct: 887 QAKLNDLKNNQRQISTRLGKIAKECDALIREKAKTKSKREEKEKELTSLQQSEASNRKEA 946 Query: 241 FNEDKDVDSINDRNEHFNKK 182 ++ K + ++D HFNKK Sbjct: 947 RSKLKKFEWLSDEEAHFNKK 966
>EZRA_STRA5 (Q8E0U6) Septation ring formation regulator ezrA| Length = 574 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = -2 Query: 379 DPEFYREASSLQYGKVSRVAEPNIDRMVNELKER-DEKRKAFSRRRKFNEDKDVDSINDR 203 + +F + L+ G R+ E N ++++R E R+A D+D D Sbjct: 228 EDDFPDQLDDLETG-YRRLLEENYHFPEKDIEQRFQEVREAIRSNSDGLVSLDLDRARDE 286 Query: 202 NEHFNKKIERAFGKYTLEI 146 NEH +KI++ + + EI Sbjct: 287 NEHIQEKIDKLYDIFEREI 305
>EZRA_STRA3 (Q8E6G4) Septation ring formation regulator ezrA| Length = 574 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = -2 Query: 379 DPEFYREASSLQYGKVSRVAEPNIDRMVNELKER-DEKRKAFSRRRKFNEDKDVDSINDR 203 + +F + L+ G R+ E N ++++R E R+A D+D D Sbjct: 228 EDDFPDQLDDLETG-YRRLLEENYHFPEKDIEQRFQEVREAIRSNSDGLVSLDLDRARDE 286 Query: 202 NEHFNKKIERAFGKYTLEI 146 NEH +KI++ + + EI Sbjct: 287 NEHIQEKIDKLYDIFEREI 305
>CF152_HUMAN (Q86VQ0) Protein C6orf152| Length = 697 Score = 28.9 bits (63), Expect = 5.2 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 26/111 (23%) Frame = -2 Query: 394 RAKDTDPEFYREASSLQYGKVSRVAE---------------------PNIDRMVNELKER 278 R KDT+ E +R SLQ K+ ++E + +R + EL + Sbjct: 188 RVKDTESELFRTKFSLQ--KLKEISEARHLPERDDLAKKLVSAELKLDDTERRIKELSKN 245 Query: 277 DEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIERAFGKY-----TLEIKN 140 E +R+ E K +D N+ K+++R + K L+IKN Sbjct: 246 LELSTNSFQRQLLAERKRAYEAHDENKVLQKEVQRLYHKLKEKERELDIKN 296
>PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 424 Score = 28.9 bits (63), Expect = 5.2 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 10/81 (12%) Frame = -2 Query: 340 GKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNE----------HF 191 GK S A+ + + N K+ KR+ + NEDKD D N+ Sbjct: 7 GKSSIRAKLSNSSLSNLFKKNKNKRQREETEEQDNEDKDESKNQDENKDTQLTPRKRRRL 66 Query: 190 NKKIERAFGKYTLEIKNNLER 128 K+ E +YT E+ L + Sbjct: 67 TKEFEEKEARYTNELPKELRK 87
>TNNT_CAEEL (Q27371) Troponin T| Length = 405 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -2 Query: 358 ASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSR--RRKFNEDKDVDSINDRNEHFNK 185 A L Y + + + I++ + ELKE+ EKR+A R+F E + D R E + Sbjct: 80 AKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDER 139 Query: 184 K 182 K Sbjct: 140 K 140
>KBN8_YEAST (P38070) Probable serine/threonine-protein kinase YBR028C (EC| 2.7.11.1) Length = 525 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 4/68 (5%) Frame = -2 Query: 343 YGKVSRVAEPNIDRM--VNELKERDE--KRKAFSRRRKFNEDKDVDSINDRNEHFNKKIE 176 YGKV V + N ++ + +L++ + + A +R+ +EDK+ + ND ++ +K++E Sbjct: 139 YGKVLLVKDVNTSKLYAMKQLRKAEILISQTATDSKRE-DEDKNDGNNNDNDDGLSKRLE 197 Query: 175 RAFGKYTL 152 R F + ++ Sbjct: 198 RTFAERSI 205
>ATG4_CRYNE (Q5K9L9) Cysteine protease ATG4 (EC 3.4.22.-) (Autophagy-related| protein 4) Length = 1193 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 Query: 2 HPGFHLLKLQKKNSEHMLQAKKPGGGGGDSKATRTLIWQGGP 127 HPG+ + +NS L A +PGG GG + R + GP Sbjct: 355 HPGWR--PITPENSTSNLPALEPGGSGGGVEDRRASLSMNGP 394
>RHP9_SCHPO (P87074) DNA repair protein rhp9 (RAD9 homolog)| Length = 778 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/67 (28%), Positives = 28/67 (41%) Frame = -2 Query: 400 YNRAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNEDKDV 221 Y R + T P F E S QY + EP+ +++ D FS++ K Sbjct: 229 YGRVESTPPAFLPETSEKQYKRKFSFTEPSSEKV-------DNTETKFSKKTK------- 274 Query: 220 DSINDRN 200 +IND N Sbjct: 275 -NINDEN 280
>NRFA_SULDE (Q9Z4P4) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming| cytochrome c nitrite reductase) (Cytochrome c nitrite reductase) Length = 514 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -2 Query: 376 PEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKFNE-DKDVDSINDRN 200 P+F + + + KV A + E++ K++A ++ R E KDVD+IND Sbjct: 449 PDFDTKDKAQKLAKVDIAALAAEKMKFKQTLEQEWKKEAKAKGRANPELYKDVDTINDGK 508 Query: 199 EHFNKK 182 +NKK Sbjct: 509 SSWNKK 514
>IF2_HAEI8 (Q4QK37) Translation initiation factor IF-2| Length = 844 Score = 28.1 bits (61), Expect = 8.8 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = -2 Query: 400 YNRAKDTDPEFYREASSLQYGKVSRVA---EPNIDRMVNELKERDEKRKAFSRRRKFNED 230 Y A D+D E E S Y SR A E DR NE + R + + A +++ +++ Sbjct: 159 YAEADDSDNESSSEDYS-DYNLSSRYALEAEDEEDRR-NENRGRGKNKVAKAKKGGRDDE 216 Query: 229 KDVDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTAL 116 +S N+R + + + FGK N ++GTAL Sbjct: 217 NSKNSKNERESNRKNQKDAKFGK-----GKNGKKGTAL 249
>Y387_MYCPN (P75395) Hypothetical protein MG269 homolog (F11_orf358b)| Length = 358 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 12/83 (14%) Frame = -2 Query: 340 GKVSRVAEPNIDRMVNELKERDEK------------RKAFSRRRKFNEDKDVDSINDRNE 197 G++ R ++ N + ++ +L +RDE+ R+ +++ NE K+ + + E Sbjct: 96 GEIKRQSQQNSELLI-QLGQRDEEIIQMQQLFKEKERQLEVYQKQLNEAKEYN--HKLEE 152 Query: 196 HFNKKIERAFGKYTLEIKNNLER 128 H+NK +E A +Y + + + R Sbjct: 153 HYNKTLEEALKEYEQQCTDAIHR 175
>RBP2_PLAVB (Q00799) Reticulocyte-binding protein 2 precursor (PvRBP-2)| Length = 2867 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/79 (25%), Positives = 31/79 (39%) Frame = -2 Query: 418 EVDMDAYNRAKDTDPEFYREASSLQYGKVSRVAEPNIDRMVNELKERDEKRKAFSRRRKF 239 E D+D+ N A D + R +Y + I + ++ KA+ K Sbjct: 2139 ETDIDSLNTALDELLKKGRTCEVSRYKLIKDTVTKEISDDTELINTIEKNVKAYLAYIKK 2198 Query: 238 NEDKDVDSINDRNEHFNKK 182 N + V + NEHFN K Sbjct: 2199 NYEDTVQDVLTLNEHFNTK 2217
>DESP_HUMAN (P15924) Desmoplakin (DP) (250/210 kDa paraneoplastic pemphigus| antigen) Length = 2871 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Frame = -2 Query: 304 RMVNELKERDEKRKAFSRRRKFNEDKDVDSINDRNEHFNKKIE---RAFGKYTLEIK 143 R EL+ + +A RR+ E + V + RNEHF K IE R+ + +EI+ Sbjct: 1649 RTQEELRRLSSEVEAL-RRQLLQEQESVKQAHLRNEHFQKAIEDKSRSLNESKIEIE 1704 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,655,756 Number of Sequences: 219361 Number of extensions: 1027426 Number of successful extensions: 4313 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4291 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
