Clone Name | rbaet94h04 |
---|---|
Clone Library Name | barley_pub |
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 60.5 bits (145), Expect = 2e-09 Identities = 28/47 (59%), Positives = 37/47 (78%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 GRSRGFG +S+ +++ AI+ALDGQ +DGR +RVNVA ERP+R F Sbjct: 187 GRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 233 Score = 42.0 bits (97), Expect = 7e-04 Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER--PQR 321 RSRGFG ++ E+ + A+ L+G +MDGR L VN AA R P+R Sbjct: 94 RSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPER 139
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 57.0 bits (136), Expect = 2e-08 Identities = 27/45 (60%), Positives = 34/45 (75%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG + ++L+ AISALDGQ ++GR +RVNVA ERP R Sbjct: 282 GRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326 Score = 33.1 bits (74), Expect = 0.34 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 +SRGFG +S ++ ++A+ + +++GR L VN AA R R Sbjct: 189 QSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSR 232
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 54.3 bits (129), Expect = 1e-07 Identities = 25/45 (55%), Positives = 33/45 (73%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG +S+ ++ AI+ LDGQ +DGR +RVN A ERP+R Sbjct: 229 GRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273 Score = 35.0 bits (79), Expect = 0.090 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 RSRGFG ++ E+ D A+ +++GR L VN AA R R Sbjct: 136 RSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSR 179
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 53.1 bits (126), Expect = 3e-07 Identities = 25/45 (55%), Positives = 33/45 (73%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG AS+ ++ AI+ LDGQ +DGR +RVNVA +R +R Sbjct: 268 GRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRR 312 Score = 33.1 bits (74), Expect = 0.34 Identities = 16/44 (36%), Positives = 27/44 (61%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 +SRGFG ++ E+ + A+ + +++GR L VN AA R +R Sbjct: 175 QSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGER 218
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 52.8 bits (125), Expect = 4e-07 Identities = 23/47 (48%), Positives = 36/47 (76%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 GRSRGFG ++S ++++ AI +L+G ++DGR +RV+ A ERP+R F Sbjct: 245 GRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQF 291 Score = 42.0 bits (97), Expect = 7e-04 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAAAES 291 GRSRGFG ++KE++++A +G E+DGR +RVN A+R F G S Sbjct: 125 GRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNS 182
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 52.0 bits (123), Expect = 7e-07 Identities = 23/47 (48%), Positives = 36/47 (76%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 GRSRGFG ++S ++++ AI +L+G ++DGR +RV+ A ERP+R F Sbjct: 246 GRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292 Score = 42.0 bits (97), Expect = 7e-04 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAAAES 291 GRSRGFG ++KE++++A +G E+DGR +RVN A+R F G S Sbjct: 126 GRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNS 183
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 48.9 bits (115), Expect = 6e-06 Identities = 22/45 (48%), Positives = 34/45 (75%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG ++S E++++AI +LDG +++GR +RV+ A RP R Sbjct: 226 GRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 270 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVN 345 GRSRGFG +SKE++++A +G E+DGR LRVN Sbjct: 125 GRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 48.9 bits (115), Expect = 6e-06 Identities = 22/45 (48%), Positives = 34/45 (75%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG ++S E++++AI +LDG +++GR +RV+ A RP R Sbjct: 232 GRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 276 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVN 345 GRSRGFG +SKE++++A +G E+DGR LRVN Sbjct: 125 GRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/45 (46%), Positives = 32/45 (71%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG + S +++ +AI +LDG ++DGR +RV+ A RP R Sbjct: 242 GRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/45 (46%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG +S ++++A +G E+DGRPLRVN P+R Sbjct: 129 GRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKR 173
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/46 (45%), Positives = 33/46 (71%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRS+GFG +S +++ AI++L+G ++DGR +RV+ A RP RG Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRG 340 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/45 (42%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG ++ ++++A +G E +GRPLRVN P+R Sbjct: 137 GRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKR 181
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 46.2 bits (108), Expect = 4e-05 Identities = 20/42 (47%), Positives = 32/42 (76%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRSRGFG ++S E ++SA+ ++ E++GRPLR+NVA ++ Sbjct: 255 GRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQK 296 Score = 31.6 bits (70), Expect = 0.99 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVN 345 RSRGF S E+ AI DG ++ GR ++VN Sbjct: 153 RSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVN 188
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 46.2 bits (108), Expect = 4e-05 Identities = 19/42 (45%), Positives = 32/42 (76%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G SRG+G + S++D +A+ ++ GQ+++GRPLR+N AA+R Sbjct: 199 GSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 240
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/43 (48%), Positives = 32/43 (74%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 GRSRG+G + S++ +SAISA++GQE++G + VNVA + P Sbjct: 69 GRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWP 111
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/45 (46%), Positives = 31/45 (68%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 RSRGFG ++++E + SAI ++G+E+DGR + VN A R RG Sbjct: 26 RSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSRGGRG 70
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 43.1 bits (100), Expect = 3e-04 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 GRSRGFG + + +AIS +DG+E++GR +RVN A +RP Sbjct: 73 GRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 42.4 bits (98), Expect = 6e-04 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRSRGFG + ++ + AI ++GQE+DGR + VN A R G Sbjct: 44 GRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSRGSGG 89
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 42.0 bits (97), Expect = 7e-04 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRSRGFG + ++ + AI ++GQ++DGR + VN A R G Sbjct: 46 GRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSRGSGG 91
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRSRGFG + ++ + AI ++GQ++DGR + VN A R G Sbjct: 46 GRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSRGSGG 91
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRSRGFG ++S++ + AI ++G+E+DGR + VN A R Sbjct: 46 GRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSR 87
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 41.2 bits (95), Expect = 0.001 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRSRGFG + ++ + AI ++GQ++DGR + VN A R Sbjct: 46 GRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQSR 87
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 40.4 bits (93), Expect = 0.002 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRSRGFG ++S+ + AI ++G+E+DGR + VN A R Sbjct: 46 GRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 40.4 bits (93), Expect = 0.002 Identities = 27/95 (28%), Positives = 47/95 (49%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGAAAESMAWRF 276 G S+G+ +AS + D+AI A++GQ + RP+ V+ A ++ +G G+AAE + Sbjct: 139 GNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLL--- 195 Query: 275 SWTHGNTAEMLLQKTEACHHLKLPH*PPDAGSPPI 171 A+ L + + H L PP + P+ Sbjct: 196 ------AAQNPLSQADRPHQLFADAPPPPSAPNPV 224 Score = 32.7 bits (73), Expect = 0.45 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAA 336 G+ +G+G + S+ED D AI ++ ++ G+P+RVN A+ Sbjct: 51 GQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKAS 90
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRSRGFG + ++ + AI ++G+E+DGR + VN A R Sbjct: 44 GRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQSR 85
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 39.7 bits (91), Expect = 0.004 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRSRGFG + ++ + AI ++G+E+DGR + VN A R G Sbjct: 44 GRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGG 89
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 38.9 bits (89), Expect = 0.006 Identities = 18/45 (40%), Positives = 30/45 (66%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG + + E+ A+S ++G+E++GR + V A +R +R Sbjct: 228 GRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272 Score = 32.7 bits (73), Expect = 0.45 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G S+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 38.9 bits (89), Expect = 0.006 Identities = 18/45 (40%), Positives = 30/45 (66%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG + + E+ A+S ++G+E++GR + V A +R +R Sbjct: 228 GRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272 Score = 32.7 bits (73), Expect = 0.45 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G S+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 38.1 bits (87), Expect = 0.011 Identities = 22/56 (39%), Positives = 33/56 (58%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGAAAESM 288 G S+GF +AS E D+A+ A++GQ + R + V+ A +R +G G AAE M Sbjct: 139 GTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERM 194 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = -2 Query: 446 RGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAA 336 +GFG + +ED D AI L+ ++ G+P++VN A+ Sbjct: 54 QGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKAS 90
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAA 300 RSRGFG + + +D A+ A++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 45 RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAA 300 RSRGFG + + +D A+ A++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 45 RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAA 300 RSRGFG + + +D A+ A++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 45 RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAA 300 RSRGFG + + +D A+ A++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 45 RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 37.4 bits (85), Expect = 0.018 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA---AERPQRGF*CGAA 300 RSRGFG + + +D A+ A++G+ +DGR +RV+ A ++ RG+ G+A Sbjct: 45 RSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSA 98
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 37.4 bits (85), Expect = 0.018 Identities = 17/45 (37%), Positives = 30/45 (66%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRSRGFG + + E+ A++ ++G+E++GR + V A +R +R Sbjct: 228 GRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIER 272 Score = 32.7 bits (73), Expect = 0.45 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G S+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 37.0 bits (84), Expect = 0.024 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GR RGFG + + +AI ALDG E GR L+VN A R R Sbjct: 39 GRMRGFGFVELEADAEETAAIEALDGAEWMGRDLKVNKAKPRENR 83
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 36.6 bits (83), Expect = 0.031 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 G+S+G+G + +K D ++AI + GQ + GR +R N A +P Sbjct: 144 GKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 36.6 bits (83), Expect = 0.031 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 G+S+G+G + +K D ++AI + GQ + GR +R N A +P Sbjct: 144 GKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 36.6 bits (83), Expect = 0.031 Identities = 15/40 (37%), Positives = 27/40 (67%) Frame = -2 Query: 446 RGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 +GFG +++ ED A+ AL G+ +D RP+R++ ++ RP Sbjct: 308 KGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPRP 347 Score = 36.6 bits (83), Expect = 0.031 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 RSRG+G + +K + AI + G+E+DGRP+ +++ +P Sbjct: 207 RSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKP 248
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 36.6 bits (83), Expect = 0.031 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAE--RPQRG 318 RSRGFG + + E A+ A++G+ +DGR +RV+ A + R RG Sbjct: 45 RSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSARGSRG 91
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 SRGF + K D + A+ A+DG +DGR LRV +A Sbjct: 53 SRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 89
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 SRGF + K D + A+ A+DG +DGR LRV +A Sbjct: 53 SRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 89
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 SRGF + K D + A+ A+DG +DGR LRV +A Sbjct: 53 SRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 89
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 SRGF + K D + A+ A+DG +DGR LRV +A Sbjct: 53 SRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 89
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 36.2 bits (82), Expect = 0.040 Identities = 16/40 (40%), Positives = 27/40 (67%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAE 333 RSRGFG + + +D A+ A++G+ +DGR +RV+ A + Sbjct: 44 RSRGFGFVTFENVDDAKDAMMAMNGKSVDGRQIRVDQAGK 83
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 36.2 bits (82), Expect = 0.040 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRS+G+G ++ E A+ L+G E+ GRP+RV ER G Sbjct: 301 GRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGG 346
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 36.2 bits (82), Expect = 0.040 Identities = 20/54 (37%), Positives = 32/54 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGAAAE 294 GRS+G+G + S E D+AI A++ Q + +P+ V+ A +R +G G AE Sbjct: 137 GRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHGDIAE 190
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 SRGF + K D + A+ A+DG +DGR LRV +A Sbjct: 54 SRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 35.8 bits (81), Expect = 0.053 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAE--RPQRGF*CGA 303 RSRGFG + + E A+ A++G+ +DGR +RV+ A + R RG GA Sbjct: 45 RSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHAGKSARGTRGGGFGA 96
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 35.4 bits (80), Expect = 0.069 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRS+G+G ++ E A+ L+G E+ GRP++V ER Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 35.4 bits (80), Expect = 0.069 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 GRS+G+G ++ E A+ L+G E+ GRP++V ER Sbjct: 288 GRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTER 329
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 35.4 bits (80), Expect = 0.069 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 G+S+G+G + +K D ++AI + GQ + GR +R N A +P Sbjct: 135 GKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 177
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 35.4 bits (80), Expect = 0.069 Identities = 15/38 (39%), Positives = 28/38 (73%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 +S GFG ++S+E++++AI AL+ ++G+ +RVN A Sbjct: 223 KSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260 Score = 34.7 bits (78), Expect = 0.12 Identities = 18/46 (39%), Positives = 27/46 (58%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GRSR FG + ED ++ I L+ E+ GR ++VN+ E+P G Sbjct: 122 GRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNI-TEKPLEG 166
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 35.4 bits (80), Expect = 0.069 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 G+S+G+G + +K D ++AI + GQ + GR +R N A +P Sbjct: 152 GKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 194
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 35.0 bits (79), Expect = 0.090 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEER 374 Score = 33.5 bits (75), Expect = 0.26 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED + A+ ++G+E+ G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVER 272
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG +++ E+ A+ GQ G+PL V +A ++ R Sbjct: 341 GKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDR 385
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED A+ ++G+E++G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED A+ ++G+E++G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED A+ ++G+E++G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED A+ ++G+E++G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED A+ ++G+E++G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVER 272 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 33.9 bits (76), Expect = 0.20 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAA-ERP 327 +S+GFG + + D + A+ DG+ +DGR LRV +A +RP Sbjct: 58 QSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRP 100
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 Score = 33.5 bits (75), Expect = 0.26 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+SRGFG + ED A+ ++G++++G+ + V A ++ +R Sbjct: 228 GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVER 272
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG ++S E+ A++ ++G+ + +PL V +A + +R Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/45 (31%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + ED A+ ++G++M+G+ + V A ++ +R Sbjct: 228 GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVER 272
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA----AERPQRGF*CGAAAES 291 GRSRGF + +D A+ +G E+DGR +RV+ + A P G G S Sbjct: 155 GRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHS 213
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 32.7 bits (73), Expect = 0.45 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA----AERPQRGF*CGAAAES 291 GRSRGF + +D A+ +G E+DGR +RV+ + A P G G S Sbjct: 157 GRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHS 215
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 32.3 bits (72), Expect = 0.58 Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEM-DGRPLRVNVAAERPQR 321 G+S+GFG + + E ++A+ AL+G++M +G+ L V A ++ +R Sbjct: 220 GKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAER 265 Score = 31.6 bits (70), Expect = 0.99 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 GRS+GFG + + + A++ L+G+ + +PL V +A + +R Sbjct: 324 GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEER 368
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G S+GFG + S+ED +A A++ E+DG + ++ A + + GF Sbjct: 603 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 649
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G S+GFG + S+ED +A A++ E+DG + ++ A + + GF Sbjct: 606 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 652 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/42 (30%), Positives = 27/42 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+S+G+ +AS ED A+++ + +E++GR +R+ + R Sbjct: 519 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 560
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+ +G+G + +E SA+ L+G+E GR LRV+ AA + Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G+ RG+ + + D+ SA DG+++DGR + V+V R +G+ Sbjct: 141 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 187
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G+ RG+ + + D+ SA DG+++DGR + V+V R +G+ Sbjct: 141 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 187
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G+ RG+ + + D+ SA DG+++DGR + V+V R +G+ Sbjct: 144 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 190
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G+ RG+ + + D+ SA DG+++DGR + V+V R +G+ Sbjct: 141 GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 187
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 32.0 bits (71), Expect = 0.76 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRV 348 G SRGFG ++ +++++ AI +G E++GR L V Sbjct: 256 GFSRGFGSVIYPTEDEMIRAIDTFNGMEVEGRVLEV 291
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+ +G+G + +E SA+ L+G+E GR LRV+ AA + Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+ +G+G + +E SA+ L+G+E GR LRV+ AA + Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+ +G+G + +E SA+ L+G+E GR LRV+ AA + Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+ +G+G + +E SA+ L+G+E GR LRV+ AA + Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G S+G G +A+ E+ A+S L G+ ++ +PL V +A + R Sbjct: 355 GTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDR 399 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + +D A+ +L+G + D + V A ++ +R Sbjct: 252 GKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G S+GFG + S+ED +A A++ E+DG + ++ A + + GF Sbjct: 607 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 653 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/42 (30%), Positives = 27/42 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+S+G+ +AS ED A+++ + +E++GR +R+ + R Sbjct: 520 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 561
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G S+GFG + S+ED +A A++ E+DG + ++ A + + GF Sbjct: 609 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 655 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+S+G+ +AS ED A+++ + E++GR +R+ + R Sbjct: 522 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPR 563 Score = 29.6 bits (65), Expect = 3.8 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGA----AAESM 288 GRS+G + S+ D + + G E+DGR + + E+ QR G + ES Sbjct: 429 GRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESK 488 Query: 287 AWRFS-WTHGNTAEMLLQKTEACHHLKLPH*P 195 S ++ T E L + E +K+P P Sbjct: 489 TLVLSNLSYSATEETLQEVFEKATFIKVPQNP 520
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G S+GFG + S+ED +A A++ E+DG + ++ A + + GF Sbjct: 608 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 654 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/42 (30%), Positives = 27/42 (64%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+S+G+ +AS ED A+++ + +E++GR +R+ + R Sbjct: 521 GKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR 562
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/47 (34%), Positives = 28/47 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF 315 G S+GFG + S+ED +A A++ E+DG + ++ A + + GF Sbjct: 606 GSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKGEGGF 652 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+S+G+ +AS ED A+++ + E++GR +R+ + R Sbjct: 519 GKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPR 560
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 32.0 bits (71), Expect = 0.76 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+ +G+G + +E SA+ L+G+E GR LRV+ AA + Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 31.6 bits (70), Expect = 0.99 Identities = 16/55 (29%), Positives = 31/55 (56%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRGF*CGAAAES 291 GR++GF ++S ED A+ + + E++GR +R+ + +G G +A+S Sbjct: 447 GRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQS 501 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER--PQRG 318 G S+GFG +++ ED +A A++ E+DG + ++ A + QRG Sbjct: 537 GASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQRG 584
>FGF5_RAT (P48807) Fibroblast growth factor 5 precursor (FGF-5) (HBGF-5)| Length = 266 Score = 31.6 bits (70), Expect = 0.99 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +1 Query: 232 VFCSNISAVFPCVHEKRQAMLSAAAPHQNP-----RCGLSAATFTRSGRPSISCPSSAEI 396 +FCS++ P EKR AP +NP G S+ATF S S S P +A Sbjct: 9 IFCSHLILSAPAQGEKRLTPEGQPAPPRNPGDSSGSRGRSSATFASS---SASSPVAASP 65 Query: 397 ALSRSSFEAHSYKPNPRER 453 S E S++ +P R Sbjct: 66 GSQGSGSEHSSFQWSPSGR 84
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 31.6 bits (70), Expect = 0.99 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 S GFG + +KE + AIS LDG +DG L++ ++ Sbjct: 662 SMGFGFVEFRTKEQANVAISTLDGHVLDGHKLQLKLS 698
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 31.6 bits (70), Expect = 0.99 Identities = 13/45 (28%), Positives = 28/45 (62%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E+ + A++ ++ + + G+PL V +A + R Sbjct: 401 GKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEVR 445
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 SRG+G + + D SA++ + GQ RP+RV +A + Sbjct: 227 SRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPK 266
>RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protein Rox21)| Length = 197 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/42 (33%), Positives = 24/42 (57%) Frame = -2 Query: 443 GFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GF + ++D + A L+G E+ G LRV ++ RP++G Sbjct: 44 GFAFVEFEHRDDAEKACDILNGSELLGSQLRVEISKGRPRQG 85
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG +++ E+ AI+ + Q + G+PL V +A + R Sbjct: 358 GKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVR 402
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 R RGF + ED +AI ++ E+ GR +RVN+A Sbjct: 45 RHRGFAFIEYEQSEDAAAAIDNMNDSELCGRTIRVNLA 82
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E A+ L G+ +DG+ L V A ++ +R Sbjct: 236 GKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+ +GFG+ ++S E+ A+ ++G+ + +PL V + R Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E A+ L G+ +DG+ L V A ++ +R Sbjct: 236 GKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+ +GFG+ ++S E+ A+ ++G+ + +PL V + R Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E A+ L G+ +DG+ L V A ++ +R Sbjct: 236 GKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 30.0 bits (66), Expect = 2.9 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+ +GFG+ ++S E+ A+ ++G+ + +PL V + R Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQAR 379
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E A+ L G+ +DG+ L V A ++ +R Sbjct: 236 GKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+ +GFG+ ++S E+ A+ ++G+ + +PL V + R Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E A+ L G+ +DG+ L V A ++ +R Sbjct: 236 GKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+ +GFG+ ++S E+ A+ ++G+ + +PL V + R Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G+S+GFG + + E A+ L G+ +DG+ L V A ++ +R Sbjct: 236 GKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G+ +GFG+ ++S E+ A+ ++G+ + +PL V + R Sbjct: 338 GQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G SRGFG +++ E+ A+S ++G+ + +PL + +A + R Sbjct: 369 GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDR 413
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 SRGFG +++ E+ SAI L+ QE GR L V A Sbjct: 141 SRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKA 177
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 G SR +G ++S+++ A+ + G GRPLR++VA+ + Sbjct: 221 GLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPK 262
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 S GFG + +KE + ISA+DG +DG +++ ++ + G Sbjct: 685 SMGFGFVEFRTKEQATAVISAMDGTVIDGHKIQLKLSHRQGNAG 728
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 S GFG ++SKE + A A+DG +DG L++ ++ Sbjct: 650 SMGFGFVEFSSKEAAEIAQKAMDGHVLDGHKLQLKIS 686
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/43 (32%), Positives = 28/43 (65%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP 327 GRS+G+G + + E +A++A +E+DGR + ++++ RP Sbjct: 301 GRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPRP 343
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA-AERP 327 RSRGF + + +D A +G E+DGR +RV+ + +RP Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRP 199
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA-AERP 327 RSRGF + + +D A +G E+DGR +RV+ + +RP Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRP 199
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA-AERP 327 RSRGF + + +D A +G E+DGR +RV+ + +RP Sbjct: 157 RSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRP 199
>PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) Length = 273 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 + RGF + ED SAI ++ E+ GR +RVNVA RP R Sbjct: 9 KHRGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRVNVA--RPVR 50
>MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing protein 1| Length = 769 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/44 (40%), Positives = 25/44 (56%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 S G+G + +KE A+ AL+G E+DG+ L V A QRG Sbjct: 580 SMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFA----QRG 619
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 RSRGFG +A ++D A++ + +G LRV++A R Sbjct: 64 RSRGFGFVSFAVEDDTKEALAKARKTKFNGHILRVDIAKRR 104
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 9/44 (20%) Frame = -2 Query: 410 DLDSAISALDGQEMDGRPLRVNVAAER---------PQRGF*CG 306 D+ AI L+G+ +DG+PL+V V+ R P++ + CG Sbjct: 131 DVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCG 174
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 S+GFG + + D D A L G ++GR + VN A R Sbjct: 159 SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 198
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERP--QRG 318 G S+GFG ++S ED +A A++ E+DG + ++ A + QRG Sbjct: 588 GSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAKPKGEFQRG 635 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/46 (26%), Positives = 27/46 (58%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 GR +G+ + + ED A+++ + E++GR +R+ ++ Q+G Sbjct: 495 GRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKG 540
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 S+GFG + + D D A L G ++GR + VN A R Sbjct: 154 SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 193
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/37 (35%), Positives = 24/37 (64%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 S GFG + +KE ++ ISA++G +DG L++ ++ Sbjct: 696 SMGFGFAEFKTKEQANAVISAMEGTILDGHKLQLKLS 732
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 S+GFG + + D D A L G ++GR + VN A R Sbjct: 155 SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATAR 194
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 RSRGFG +A+ E++D+A++A ++DGR + A R Sbjct: 52 RSRGFGFVTYATVEEVDAAMNARP-HKVDGRVVEPKRAVSR 91
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 S GFG + +KE ++ I+A+DG +DG +++ ++ Sbjct: 708 SMGFGFVEFRTKEQANAVIAAMDGTVIDGHKIQLKLS 744
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 RSRGFG +A+ E++D+A++A ++DGR + A R Sbjct: 52 RSRGFGFVTYATVEEVDAAMNARP-HKVDGRVVEPKRAVSR 91
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 RSRGFG +A+ E++D+A++A ++DGR + A R Sbjct: 52 RSRGFGFVTYATVEEVDAAMNARP-HKVDGRVVEPKRAVSR 91
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 RSRGFG +A+ E++D+A++A ++DGR + A R Sbjct: 52 RSRGFGFVTYATVEEVDAAMNARP-HKVDGRVVEPKRAVSR 91
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 29.3 bits (64), Expect = 4.9 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = -2 Query: 455 GRSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQR 321 G SRGFG +++ E+ A+ ++G+ + +PL V +A + +R Sbjct: 365 GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEER 409
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVA 339 S GFG + +KE + I+A+DG +DG +++ ++ Sbjct: 657 SMGFGFIEFRTKEQAGAVIAAMDGAVIDGHKIQLKIS 693
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -2 Query: 449 SRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAER 330 S+GFG +D + A L G ++GR + VN A R Sbjct: 191 SKGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATAR 230
>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -2 Query: 425 WASKEDLDSAISALDGQEMDGRPLRVNVA 339 ++++ED A+ AL+G+ +DG P+ V +A Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -2 Query: 425 WASKEDLDSAISALDGQEMDGRPLRVNVA 339 ++++ED A+ AL+G+ +DG P+ V +A Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 587 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -2 Query: 425 WASKEDLDSAISALDGQEMDGRPLRVNVA 339 ++++ED A+ AL+G+ +DG P+ V +A Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 RSRGFG ++S ++D+A++A +DGR + A R + G Sbjct: 60 RSRGFGFVTFSSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 103
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 28.5 bits (62), Expect = 8.4 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISA--LDGQEMDGRPLRVNVA 339 R +GFG +A EDLDS +SA L+ + + R +RV+VA Sbjct: 135 RLKGFG---YAEFEDLDSLLSALSLNEESLGNRRIRVDVA 171
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 28.5 bits (62), Expect = 8.4 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISA--LDGQEMDGRPLRVNVA 339 R +GFG +A EDLDS +SA L+ + + R +RV+VA Sbjct: 135 RLKGFG---YAEFEDLDSLLSALSLNEESLGNRRIRVDVA 171
>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 595 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -2 Query: 425 WASKEDLDSAISALDGQEMDGRPLRVNVA 339 ++++ED A+ AL+G+ +DG P+ V +A Sbjct: 273 FSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 Query: 452 RSRGFGL*LWASKEDLDSAISALDGQEMDGRPLRVNVAAERPQRG 318 RSRGFG ++S ++D+A++A +DGR + A R + G Sbjct: 48 RSRGFGFVTFSSMAEVDAAMAARP-HSIDGRVVEPKRAVAREESG 91
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/65 (26%), Positives = 25/65 (38%) Frame = +1 Query: 262 PCVHEKRQAMLSAAAPHQNPRCGLSAATFTRSGRPSISCPSSAEIALSRSSFEAHSYKPN 441 P + RQ +SA Q+ G + + R P+S +A S+ H P Sbjct: 15 PMTLKPRQGSVSAGVVKQSFSHGRTKTVVVETKRTRTHAPASGNLAAPSSAERRHGEAPA 74 Query: 442 PRERP 456 PR P Sbjct: 75 PRPAP 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,698,430 Number of Sequences: 219361 Number of extensions: 1376435 Number of successful extensions: 4204 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 3996 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4203 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)