ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet94h04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein Length = 1139 Score = 632 bits (319), Expect = e-178 Identities = 353/364 (96%), Gaps = 2/364 (0%) Strand = Plus / Minus Query: 94 aaaagttgaactcatggtattgacaagaaattaacatgattacaccagcagcgaacgaaa 153 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1133 aaaagttgaactcatggtattgacaagaaattaacatgattacaccagcagcgaacgaaa 1074 Query: 154 gcatgnnnnnnntatgggatgggaggagagccagcatcgggaggctaatgcgggagtttc 213 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1073 gcatgaaaaaaatatgggatgggaggagagccaccatcgggaggctaatgcgggagtttc 1014 Query: 214 aagtggtgacatgcttcagtcttctgcagtaacatttcagcagtgttcccatgtgtccac 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 aagtggtgacatgcttcagtcttctgcagtaacatttcagcagtgttcccatgtgtccac 954 Query: 274 gagaaacgccaagccatgctctccgccgctgcgccgcatcagaaccctcgctgtggtctc 333 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 953 gagaaacgccaagccatgctctccgccgctgcaccgcatcagaaccctcgctgtggtctc 894 Query: 334 tctgctgcaacgttcactcggagtgggcggccatccatctcctgtccatcaagcgctgaa 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 tctgctgcaacgttcactcggagtgggcggccatccatctcctgtccatcaagcgctgaa 834 Query: 394 atagcactgtcaagatcctcctttgaagcccatagttac-aaaccaaatcctcgcgaacg 452 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 833 atagcactgtcaagatcctcctttgaag-ccatagttacaaaaccaaatcctcgcgaacg 775 Query: 453 ccca 456 |||| Sbjct: 774 ccca 771
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 378 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| |||||| Sbjct: 600 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 541 Query: 379 ccatcaagcgctgaaatagca 399 |||||||| || ||||||||| Sbjct: 540 ccatcaagggcagaaatagca 520
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 378 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| |||||| Sbjct: 981 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 922 Query: 379 ccatcaagcgctgaaatagca 399 |||||||| || ||||||||| Sbjct: 921 ccatcaagggcagaaatagca 901
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2 mRNA Length = 1302 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 378 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| |||||| Sbjct: 975 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 916 Query: 379 ccatcaagcgctgaaatagca 399 |||||||| || ||||||||| Sbjct: 915 ccatcaagggcagaaatagca 895
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 378 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| |||||| Sbjct: 978 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 919 Query: 379 ccatcaagcgctgaaatagca 399 |||||||| || ||||||||| Sbjct: 918 ccatcaagggcagaaatagca 898
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 378 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| |||||| Sbjct: 600 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 541 Query: 379 ccatcaagcgctgaaatagca 399 |||||||| || ||||||||| Sbjct: 540 ccatcaagggcagaaatagca 520
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 89.7 bits (45), Expect = 7e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatccatctcctgt 378 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| |||||| Sbjct: 975 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatccaattcctgt 916 Query: 379 ccatcaagcgctgaaatagca 399 |||||||| || ||||||||| Sbjct: 915 ccatcaagggcagaaatagca 895
>gb|AY108263.1| Zea mays PCO100700 mRNA sequence Length = 891 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 307 ccgcatcagaaccctcgctgtggtctctctgctgcaacgttcactcggagtgggcggcca 366 |||||||| || || | |||||| | |||||||||||| |||||||| || |||||||| Sbjct: 616 ccgcatcaaaagcccctctgtggccgctctgctgcaacattcactcgaagagggcggccg 557 Query: 367 tccatctcctgtccatcaagcgctgaaatagca 399 |||| ||||||||||| || || ||||||||| Sbjct: 556 tccaattcctgtccatctagggccgaaatagca 524
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatcca 370 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| Sbjct: 27873352 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatcca 27873403
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 319 cctcgctgtggtctctctgctgcaacgttcactcggagtgggcggccatcca 370 ||||||||||||| ||| ||||| || |||||||| |||||||||||||||| Sbjct: 81430 cctcgctgtggtcgctcagctgccacattcactcgaagtgggcggccatcca 81481
>gb|AC026762.17| Homo sapiens 3 BAC RP11-373C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 54780 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 414 ctttgaagcccatagttacaaa 435 |||||||||||||||||||||| Sbjct: 3737 ctttgaagcccatagttacaaa 3716
>ref|NM_112902.2| Arabidopsis thaliana CYP705A20; heme binding / iron ion binding / monooxygenase/ oxygen binding AT3G20110 (CYP705A20) mRNA, complete cds Length = 1862 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ttaccaacaaaaccttcttcg 50 ||||||||||||||||||||| Sbjct: 845 ttaccaacaaaaccttcttcg 825
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 tgaagcccatagttacaaacc 437 ||||||||||||||||||||| Sbjct: 108280 tgaagcccatagttacaaacc 108300
>gb|BT006102.1| Arabidopsis thaliana clone U51190 putative cytochrome P450 (At3g20110) mRNA, complete cds Length = 1564 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ttaccaacaaaaccttcttcg 50 ||||||||||||||||||||| Sbjct: 682 ttaccaacaaaaccttcttcg 662
>gb|AC013410.5| Homo sapiens BAC clone RP11-495I2 from 2, complete sequence Length = 200900 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 60 agaacactagggcatcattacagtagcct 88 ||||||||||||| |||||||||||||| Sbjct: 170126 agaacactagggctgcattacagtagcct 170154
>gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complete sequence Length = 106992 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 ctcatggtattgacaagaaattaac 128 |||||||| |||||||||||||||| Sbjct: 5863 ctcatggttttgacaagaaattaac 5887
>gb|AC092380.4| Homo sapiens chromosome 16 clone RP11-727M7, complete sequence Length = 167071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ctacttgaaaagttgaactca 107 ||||||||||||||||||||| Sbjct: 141210 ctacttgaaaagttgaactca 141190
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21 Length = 83253 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ttaccaacaaaaccttcttcg 50 ||||||||||||||||||||| Sbjct: 42394 ttaccaacaaaaccttcttcg 42374
>dbj|AK118830.1| Arabidopsis thaliana At3g20110 mRNA for putative cytochrome P450, complete cds, clone: RAFL21-16-G19 Length = 1862 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 ttaccaacaaaaccttcttcg 50 ||||||||||||||||||||| Sbjct: 845 ttaccaacaaaaccttcttcg 825
>gb|AY107260.1| Zea mays PCO071008 mRNA sequence Length = 737 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 gccatgctctccgccgctgcg 306 ||||||||||||||||||||| Sbjct: 62 gccatgctctccgccgctgcg 82
>gb|AY701048.1| Rhinophis philippinus voucher LSUMNS H-6165 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 304 tgaatacatatatcatatta 323
>gb|AY701047.1| Rhinophis philippinus voucher LSUMNS H-6164 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 304 tgaatacatatatcatatta 323
>gb|AY701039.1| Rhinophis philippinus voucher MW 1740 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 304 tgaatacatatatcatatta 323
>gb|AY701038.1| Rhinophis philippinus voucher LSUMNS H-5158 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 304 tgaatacatatatcatatta 323
>gb|AY701037.1| Rhinophis philippinus voucher LSUMNS H-5157 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 304 tgaatacatatatcatatta 323
>gb|AY701036.1| Rhinophis philippinus voucher MW 1742 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 507 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 304 tgaatacatatatcatatta 323
>gb|AY022079.1| Oryza sativa microsatellite MRG4404 containing (TC)X15, closest to marker R3324, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggcggccatccatctcctgt 378 |||||||||||||||||||| Sbjct: 66 ggcggccatccatctcctgt 85
>gb|BC026770.1| Mus musculus abhydrolase domain containing 3, mRNA (cDNA clone MGC:30497 IMAGE:4234600), complete cds Length = 1900 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 1847 tgaatacatatatcatatta 1866
>ref|NM_134130.1| Mus musculus abhydrolase domain containing 3 (Abhd3), mRNA Length = 1903 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 1847 tgaatacatatatcatatta 1866
>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence Length = 207139 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 48847 tgaatacatatatcatatta 48828
>gb|AF512740.1| Rhinophis philippinus 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 1821 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 1630 tgaatacatatatcatatta 1649
>gb|AC110682.6| Rattus norvegicus 18 BAC CH230-197I20 (Children's Hospital Oakland Research Institute) complete sequence Length = 166696 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ttaccaacaaaaccttcttc 49 |||||||||||||||||||| Sbjct: 103115 ttaccaacaaaaccttcttc 103134
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ctctccgccgctgcgccgca 311 |||||||||||||||||||| Sbjct: 58073 ctctccgccgctgcgccgca 58054
>emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in linkage group 11, complete sequence Length = 84892 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 agcctacttgaaaagttgaa 103 |||||||||||||||||||| Sbjct: 58928 agcctacttgaaaagttgaa 58909
>gb|AF429302.1| Mus musculus lung alpha/beta hydrolase fold protein 3 mRNA, complete cds Length = 1903 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 1847 tgaatacatatatcatatta 1866
>dbj|AK134676.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330521P13 product:abhydrolase domain containing 3, full insert sequence Length = 1902 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 1863 tgaatacatatatcatatta 1882
>dbj|AK144238.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:G430143N22 product:abhydrolase domain containing 3, full insert sequence Length = 1893 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tgaatacatatatcatatta 26 |||||||||||||||||||| Sbjct: 1855 tgaatacatatatcatatta 1874
>gb|DQ139261.1| Vibro sp. DAT722 inDAT722 integron, complete sequence and flanking sequences Length = 136095 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aacaaaaccttcttcgatta 54 |||||||||||||||||||| Sbjct: 98969 aacaaaaccttcttcgatta 98950
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 ctctccgccgctgcgccgca 311 |||||||||||||||||||| Sbjct: 27789403 ctctccgccgctgcgccgca 27789384
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 aaaccaaatcctcgcgaacgccca 456 |||||||||||||| ||||||||| Sbjct: 22204263 aaaccaaatcctcgtgaacgccca 22204286
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggcggccatccatctcctgt 378 |||||||||||||||||||| Sbjct: 33700319 ggcggccatccatctcctgt 33700338
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 aaaccaaatcctcgcgaacgccca 456 |||||||||||||| ||||||||| Sbjct: 24161 aaaccaaatcctcgtgaacgccca 24184
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 aaaccaaatcctcgcgaacgccca 456 |||||||||||||| ||||||||| Sbjct: 125756 aaaccaaatcctcgtgaacgccca 125779
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggcggccatccatctcctgt 378 |||||||||||||||||||| Sbjct: 68726 ggcggccatccatctcctgt 68745
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 ggcggccatccatctcctgt 378 |||||||||||||||||||| Sbjct: 31186 ggcggccatccatctcctgt 31205
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 aaaccaaatcctcgcgaacgccca 456 ||||||||||| |||||||||||| Sbjct: 2403 aaaccaaatccccgcgaacgccca 2380
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 aaaccaaatcctcgcgaacgccca 456 |||||||||||||| ||||||||| Sbjct: 871 aaaccaaatcctcgtgaacgccca 848
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 aaaccaaatcctcgcgaacgccca 456 |||||||||||||| ||||||||| Sbjct: 872 aaaccaaatcctcgtgaacgccca 849
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 aaaccaaatcctcgcgaacgccca 456 ||||||||||| |||||||||||| Sbjct: 914 aaaccaaatccccgcgaacgccca 891
>dbj|AP002827.4| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2589O24, complete sequence Length = 64281 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tcttctgcagtaacatttca 252 |||||||||||||||||||| Sbjct: 59392 tcttctgcagtaacatttca 59373
>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546, complete sequence Length = 107979 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tattgacaagaaattaacat 130 |||||||||||||||||||| Sbjct: 79592 tattgacaagaaattaacat 79573 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,769,802 Number of Sequences: 3902068 Number of extensions: 3769802 Number of successful extensions: 70313 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70144 Number of HSP's gapped (non-prelim): 167 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
