Clone Name | rbaet94g10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete sequence Length = 164963 Score = 42.1 bits (21), Expect = 0.71 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 atactttgaattctcattaca 174 ||||||||||||||||||||| Sbjct: 69909 atactttgaattctcattaca 69929
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 122256 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 122212
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 7937 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 7893
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 22913481 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 22913437
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full insert sequence Length = 1468 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 1372 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 1328
>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full insert sequence Length = 1540 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 1377 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 1333
>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full insert sequence Length = 1538 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 1377 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 1333
>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full insert sequence Length = 1566 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 1377 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 1333
>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full insert sequence Length = 1473 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 1377 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 1333
>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full insert sequence Length = 1571 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 1373 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 1329
>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full insert sequence Length = 778 Score = 42.1 bits (21), Expect = 0.71 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 140 gtgttgggagctcgatactttgaa-ttctcattacaaagaatcga 183 |||||||| |||||| |||| ||| |||||||||||||| ||||| Sbjct: 592 gtgttgggcgctcgaaacttcgaaattctcattacaaaggatcga 548
>gb|AC025763.5| Homo sapiens chromosome 16 clone CTB-186A5, complete sequence Length = 194690 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gagtattacagatgcacagc 42 |||||||||||||||||||| Sbjct: 122737 gagtattacagatgcacagc 122756
>gb|AC098650.2| Homo sapiens chromosome 3 clone RP11-654A7, complete sequence Length = 201243 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 atactttgaattctcattacaaag 177 |||||||||||||||||| ||||| Sbjct: 22226 atactttgaattctcatttcaaag 22203 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,062,938 Number of Sequences: 3902068 Number of extensions: 1062938 Number of successful extensions: 66364 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 66330 Number of HSP's gapped (non-prelim): 44 length of query: 219 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 197 effective length of database: 17,147,199,772 effective search space: 3377998355084 effective search space used: 3377998355084 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)