Clone Name | rbaet94g05 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ234544.1|HVU234544 Hordeum vulgare genomic DNA fragment; clone MWG0626.uni Length = 375 Score = 704 bits (355), Expect = 0.0 Identities = 370/375 (98%) Strand = Plus / Plus Query: 20 aatcattttatttcacgacacacaacacaccacgcgcgcgcggacacgctgcttcaatcc 79 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcattttatttcacgacacacaacacaccacgcgcgcgcggacacgctgcttcaatcc 60 Query: 80 aagcacggccagaatctgaatgcttagcaacagtagtagcagtctctggagttcttaaag 139 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || Sbjct: 61 aagcacggccagaatctgaatgcttagcaacagtagtagcagtctgtggagttgttagag 120 Query: 140 gttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcgac 199 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 121 gttgaacatgaccttgatggcgtcgcggccgcgcgcgctgacctggaacgcctcttcgac 180 Query: 200 ctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccgct 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccgct 240 Query: 260 ccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacgtc 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacgtc 300 Query: 320 cacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatccccac 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatccccac 360 Query: 380 caggcaaaccctccc 394 ||||||||||||||| Sbjct: 361 caggcaaaccctccc 375
>ref|XM_483620.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1131 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Plus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 100 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 159 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 160 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 219 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 220 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 279 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 280 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 339 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 340 acgaggcacaccttcccgcc 359
>ref|XM_507318.1| PREDICTED Oryza sativa (japonica cultivar-group), P0623F08.37 mRNA Length = 1556 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 1170 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 1111 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 1110 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 1051 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 1050 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 991 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 990 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 931 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 930 acgaggcacaccttcccgcc 911
>ref|XM_483619.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 1202 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 1143 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 1142 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 1083 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 1082 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 1023 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1022 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 963 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 962 acgaggcacaccttcccgcc 943
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 27310835 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 27310776 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 27310775 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 27310716 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 27310715 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 27310656 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27310655 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 27310596 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 27310595 acgaggcacaccttcccgcc 27310576
>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0623F08 Length = 154540 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 134038 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 133979 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 133978 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 133919 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 133918 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 133859 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133858 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 133799 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 133798 acgaggcacaccttcccgcc 133779
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 12362 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 12303 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 12302 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 12243 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 12242 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 12183 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 12182 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 12123 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 12122 acgaggcacaccttcccgcc 12103
>dbj|AK108562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B12, full insert sequence Length = 1131 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Plus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 100 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 159 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 160 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 219 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 220 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 279 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 280 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 339 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 340 acgaggcacaccttcccgcc 359
>dbj|AK101517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H09, full insert sequence Length = 1353 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 1202 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 1143 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 1142 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 1083 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 1082 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 1023 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1022 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 963 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 962 acgaggcacaccttcccgcc 943
>dbj|AK063995.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E11, full insert sequence Length = 1556 Score = 317 bits (160), Expect = 2e-83 Identities = 235/260 (90%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||||||||||||||||||||| | |||||||||| |||||||| || Sbjct: 1170 aggttgaacatgaccttgatggcgtcgcggccacgggcgctgacctcgaacgcctcctcc 1111 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 1110 acgtcctcctgcgagaacccgaatcggtgggtgatgagcggcttcacgtcgatcttgccg 1051 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || || ||||| |||| ||| |||||||||||||||||||| ||||| |||||||||||| Sbjct: 1050 ctgcggaggaactcgatgcagagcggccacgtgtccttgtaccggaatatccccaccacg 991 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 990 tccacctccctgatcgccgccgacgtcagcggcaccgtcatctcgttgtgccccatcccg 931 Query: 378 accaggcaaaccctcccgcc 397 || ||||| ||| ||||||| Sbjct: 930 acgaggcacaccttcccgcc 911
>gb|BT009352.1| Triticum aestivum clone wlm96.pk0016.h12:fis, full insert mRNA sequence Length = 933 Score = 248 bits (125), Expect = 1e-62 Identities = 131/133 (98%) Strand = Plus / Minus Query: 276 cacagcggccacgtgtccttgtaacggaagatccccaccacgtccacctcccggatcgcc 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 cacagcggccacgtgtccttgtaacggaagatccccaccacgtccacctcccggatcgcc 874 Query: 336 gccgacgtgagcggcaccgtcatctcgttgtgccccatccccaccaggcaaaccctcccg 395 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 873 gccgacgtcagcggcaccgtcatctcgttgtgccccatccccaccaggcacaccctcccg 814 Query: 396 cccggccgcgtcg 408 ||||||||||||| Sbjct: 813 cccggccgcgtcg 801
>gb|BT016754.1| Zea mays clone Contig587 mRNA sequence Length = 1458 Score = 244 bits (123), Expect = 2e-61 Identities = 234/271 (86%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||| || ||||| |||||||||| |||||||||| ||| |||| || Sbjct: 1187 aggttgaacatgacttttatggcatcgcggccgcgggcgctgacctcgaaggcctcctcc 1128 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || |||| ||||||||| ||||| | ||| |||||||||||||| ||||| | ||||||| Sbjct: 1127 acgtcccgctgcgagaagccgaagcggtgggtgatgagcggcttgacgtccaccttgccg 1068 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || ||||||||||||| |||||||||||| ||||||||||| ||||| | ||||||||| Sbjct: 1067 ctgcgcaggaagtcgatgcacagcggccaggtgtccttgtaccggaacacgcccaccacg 1008 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 ||||||||||| |||||||| ||| ||||||| ||||||||||||||| |||||||| Sbjct: 1007 tccacctcccgcgccgccgccgccgtcagcggcagcgtcatctcgttgtggcccatcccg 948 Query: 378 accaggcaaaccctcccgcccggccgcgtcg 408 |||||||| ||| ||||||| |||||||||| Sbjct: 947 accaggcacaccttcccgccgggccgcgtcg 917
>gb|AY105831.1| Zea mays PCO126824 mRNA sequence Length = 1463 Score = 244 bits (123), Expect = 2e-61 Identities = 234/271 (86%) Strand = Plus / Minus Query: 138 aggttgaacatgaccttgatggcgtcgcggccgcccgcgctgacctggaacgccttttcg 197 |||||||||||||| |||||||| |||||||||| |||||||||| ||| |||| || Sbjct: 1269 aggttgaacatgactttgatggcatcgcggccgcgggcgctgacctcgaaggcctcctcc 1210 Query: 198 acctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccg 257 || |||| ||||||||| ||||| | ||| |||||||||||||| ||||| | ||||||| Sbjct: 1209 acgtcccgctgcgagaagccgaagcggtgggtgatgagcggcttgacgtccaccttgccg 1150 Query: 258 ctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacg 317 || ||||||||||||| |||||||||||| ||||||||||| ||||| | ||||||||| Sbjct: 1149 ctgcgcaggaagtcgatgcacagcggccaggtgtccttgtaccggaacacgcccaccacg 1090 Query: 318 tccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccc 377 ||||||||||| |||||||| ||| || |||| ||||||||||||||| |||||||| Sbjct: 1089 tccacctcccgcgccgccgccgccgtcaggggcagcgtcatctcgttgtggcccatcccg 1030 Query: 378 accaggcaaaccctcccgcccggccgcgtcg 408 |||||||| ||| ||||||| |||||||||| Sbjct: 1029 accaggcacaccttcccgccgggccgcgtcg 999
>gb|BT019270.1| Zea mays clone Contig943.F mRNA sequence Length = 538 Score = 157 bits (79), Expect = 3e-35 Identities = 160/187 (85%) Strand = Plus / Minus Query: 199 cctccccctgcgagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccgc 258 ||||||||||||| || ||||| | | | | |||||||||||| ||||| | |||||| | Sbjct: 195 cctccccctgcgaaaaaccgaaacggggggggatgagcggcttgacgtccaccttgcccc 136 Query: 259 tccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccccaccacgt 318 | | ||||||||||| |||||||||||| ||||||||||| ||||| | |||||||||| Sbjct: 135 tgcccaggaagtcgatgcacagcggccaggtgtccttgtaccggaacacgcccaccacgt 76 Query: 319 ccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccccatcccca 378 |||||||||| |||||||| ||| ||||||| ||||||||||||||| |||||||| | Sbjct: 75 ccacctcccgcgccgccgccgccgtcagcggcagcgtcatctcgttgtggcccatcccga 16 Query: 379 ccaggca 385 ||||||| Sbjct: 15 ccaggca 9
>gb|BT018090.1| Zea mays clone EL01N0552D08.c mRNA sequence Length = 692 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 251 cttgccgctccgcaggaagtcgaggcacagcggccacgtgtccttgtaacggaagatccc 310 |||||| || |||||||| || | |||||||||||| ||| ||||||| ||||| | ||| Sbjct: 535 cttgcccctgcgcaggaaatcaatgcacagcggccaggtggccttgtaccggaaaacccc 476 Query: 311 caccacgtccacctcccggatcgccgccgacgtgagcggcaccgtcatctcgttgtgccc 370 ||||| |||||||||||| | ||||| || ||||||| ||||||||||||||| || Sbjct: 475 caccaagtccacctcccgcgacaccgcctcagtcagcggcagcgtcatctcgttgtgacc 416 Query: 371 catccccaccaggcaaaccctcccgcccggccgcgtcg 408 |||||| |||||||| ||| ||||||| |||||||||| Sbjct: 415 catcccgaccaggcacaccttcccgccgggccgcgtcg 378
>dbj|AB025969.1| Prunus persica mRNA for NAD-dependent sorbitol dehydrogenase, complete cds Length = 1457 Score = 61.9 bits (31), Expect = 1e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 210 gagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccgctccgcaggaag 269 ||||| ||||| | |||||| ||||| |||||||| |||||||| ||| | | || || Sbjct: 1224 gagaatccgaaacggtgcgttatgaggggcttcacatcgatcttaccggttctcaaaaac 1165 Query: 270 tcgaggcacagcggccacgtgtccttgtaacggaa 304 ||||||||||||||||| |||| |||||| ||||| Sbjct: 1164 tcgaggcacagcggccatgtgttcttgtaccggaa 1130
>gb|AY244813.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 7 gene, partial cds Length = 1085 Score = 60.0 bits (30), Expect = 6e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcggccacgtgtcc 293 |||||||||||||||||||| ||||| | || || || ||||| |||||||| |||| | Sbjct: 1026 agcggcttcacgtcgatcttcccgcttctcaaaaactcaaggcaaagcggccatgtgttc 967 Query: 294 ttgtaacggaagatccccaccacgtccacctccc 327 |||||||| || | || |||||||| ||||||| Sbjct: 966 ttgtaacgaaaaactccaaccacgtcaacctccc 933
>gb|AY244808.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 2 gene, partial cds Length = 1102 Score = 60.0 bits (30), Expect = 6e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcggccacgtgtcc 293 |||||||||||||||||||| ||||| | || || || ||||| |||||||| |||| | Sbjct: 1041 agcggcttcacgtcgatcttcccgcttctcaaaaactcaaggcaaagcggccatgtgttc 982 Query: 294 ttgtaacggaagatccccaccacgtccacctccc 327 |||||||| || | || |||||||| ||||||| Sbjct: 981 ttgtaacgaaaaactccaaccacgtcaacctccc 948
>gb|AY244807.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 2 mRNA, complete cds Length = 1432 Score = 60.0 bits (30), Expect = 6e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcggccacgtgtcc 293 |||||||||||||||||||| ||||| | || || || ||||| |||||||| |||| | Sbjct: 1062 agcggcttcacgtcgatcttcccgcttctcaaaaactcaaggcaaagcggccatgtgttc 1003 Query: 294 ttgtaacggaagatccccaccacgtccacctccc 327 |||||||| || | || |||||||| ||||||| Sbjct: 1002 ttgtaacgaaaaactccaaccacgtcaacctccc 969
>gb|AF323505.1| Malus x domestica sorbitol dehydrogenase (SDH2) mRNA, complete cds Length = 1485 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcggccacgtgtcc 293 |||||||||||||||||||| ||||| | || || || ||||| |||||||| |||| | Sbjct: 1105 agcggcttcacgtcgatcttcccgcttctcaaaaactctaggcaaagcggccatgtgttc 1046 Query: 294 ttgtaa 299 |||||| Sbjct: 1045 ttgtaa 1040
>gb|DQ011858.1| Polygonum sibiricum sorbitol dehydrogenase mRNA, partial cds Length = 235 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Minus Query: 210 gagaacccgaacctgtgcgtgatgagcggcttcacgtcgatcttgccgctccgcaggaag 269 |||||||||||||| || || ||||| |||||||| |||||||| || || | |||||| Sbjct: 94 gagaacccgaacctatgtgttatgagtggcttcacatcgatctttccactgctcaggaac 35 Query: 270 tcgaggcacagcggccacgtgt 291 || ||||| || ||||| |||| Sbjct: 34 tcaaggcaaagtggccatgtgt 13
>gb|AY244812.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 8 gene, partial cds Length = 1104 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Minus Query: 224 gtgcgtgatgagcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcgg 283 ||||||||| ||||| |||||||||||||| || || | || || |||||||| || || Sbjct: 1056 gtgcgtgataagcggtttcacgtcgatcttcccacttctcaaaaactcgaggcaaagtgg 997 Query: 284 ccacgtgtccttgtaacggaa 304 ||| |||| |||||| ||||| Sbjct: 996 ccatgtgttcttgtaccggaa 976
>gb|AY244809.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 3 gene, partial cds Length = 1098 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatcttgccgct 259 |||||||||||||||||||| ||||| Sbjct: 1039 agcggcttcacgtcgatcttcccgct 1014
>gb|AF323506.1| Malus x domestica sorbitol dehydrogenase (SDH3) mRNA, complete cds Length = 1521 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatcttgccgct 259 |||||||||||||||||||| ||||| Sbjct: 1142 agcggcttcacgtcgatcttcccgct 1117
>gb|AY244810.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 9 mRNA, complete cds Length = 1359 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 228 gtgatgagcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcggccac 287 ||||| |||||||||||||| ||||| || || | || || |||||||| |||||||| Sbjct: 1104 gtgataagcggcttcacgtcaatcttcccacttctcaaaaactcgaggcaaagcggccat 1045 Query: 288 gtgtccttgtaacggaa 304 |||| || ||| ||||| Sbjct: 1044 gtgttctggtatcggaa 1028
>gb|AF323507.1| Malus x domestica sorbitol dehydrogenase (SDH4) mRNA, complete cds Length = 1359 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Minus Query: 228 gtgatgagcggcttcacgtcgatcttgccgctccgcaggaagtcgaggcacagcggccac 287 ||||| |||||||||||||| ||||| || || | || || |||||||| |||||||| Sbjct: 1117 gtgataagcggcttcacgtcaatcttcccacttctcaaaaactcgaggcaaagcggccat 1058 Query: 288 gtgtccttgtaacggaa 304 |||| || ||| ||||| Sbjct: 1057 gtgttctggtatcggaa 1041
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gatccccaccacgtccacctc 325 ||||||||||||||||||||| Sbjct: 6265038 gatccccaccacgtccacctc 6265058
>ref|XM_512265.1| PREDICTED: Pan troglodytes similar to Guanine nucleotide-binding protein G(y), alpha subunit (Alpha-11) (LOC455580), mRNA Length = 690 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 355 ccacgtccacctcccggatc 336
>ref|NM_197022.1| Oryza sativa (japonica cultivar-group) putative membrane-associated salt-inducible protein (OSJNBa0055P24.12), mRNA Length = 2436 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcagtctgcaaaatcatttt 28 |||||||||||||||||||| Sbjct: 810 tcagtctgcaaaatcatttt 829
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgtgagcggcaccgtcatct 360 |||||||||||||||||||| Sbjct: 2934112 cgtgagcggcaccgtcatct 2934131
>ref|NM_192033.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 438 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 gatccccaccacgtccacctcccggatc 332 |||| |||||||||||||||||| |||| Sbjct: 153 gatcaccaccacgtccacctccccgatc 126
>ref|XM_362781.1| Magnaporthe grisea 70-15 hypothetical protein (MG08267.4) partial mRNA Length = 1623 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 gttgaacatgaccttgatggcgtc 163 |||||||||| ||||||||||||| Sbjct: 1059 gttgaacatgtccttgatggcgtc 1036
>gb|AY244814.1| Malus x domestica NAD-dependent sorbitol dehydrogenase 6 gene, partial cds Length = 1163 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 agcggcttcacgtcgatctt 253 |||||||||||||||||||| Sbjct: 1111 agcggcttcacgtcgatctt 1092
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gatggcgtcgcggccgcccg 174 |||||||||||||||||||| Sbjct: 65077 gatggcgtcgcggccgcccg 65058
>gb|BC096227.1| Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class), mRNA (cDNA clone MGC:116880 IMAGE:40005025), complete cds Length = 1261 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 405 ccacgtccacctcccggatc 386
>gb|BC096225.1| Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class), mRNA (cDNA clone MGC:116878 IMAGE:40005016), complete cds Length = 1261 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 405 ccacgtccacctcccggatc 386
>gb|BC096226.1| Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class), mRNA (cDNA clone MGC:116879 IMAGE:40005021), complete cds Length = 1261 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 405 ccacgtccacctcccggatc 386
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 tcgatcttgccgctccgcaggaag 269 |||||||||||||||||| ||||| Sbjct: 3785886 tcgatcttgccgctccgctggaag 3785909
>gb|AE005719.1| Caulobacter crescentus CB15 section 45 of 359 of the complete genome Length = 14382 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 tgatggcgtcgcggccgcccgcgc 177 ||||||| |||||||||||||||| Sbjct: 441 tgatggcctcgcggccgcccgcgc 464
>gb|AF493900.1| Homo sapiens guanine nucleotide binding protein alpha 11 (GNA11) mRNA, complete cds Length = 1080 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 355 ccacgtccacctcccggatc 336
>gb|AC011402.9| Homo sapiens chromosome 5 clone CTB-38B5, complete sequence Length = 70834 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctctggagttcttaaaggtt 142 |||||||||||||||||||| Sbjct: 69231 ctctggagttcttaaaggtt 69250
>gb|AC011370.4| Homo sapiens chromosome 5 clone CTB-107A22, complete sequence Length = 117145 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ctctggagttcttaaaggtt 142 |||||||||||||||||||| Sbjct: 51412 ctctggagttcttaaaggtt 51431
>emb|CR457004.1| Homo sapiens full open reading frame cDNA clone RZPDo834F115D for gene GNA11, guanine nucleotide binding protein (G protein), alpha 11 (Gq class); complete cds, incl. stopcodon Length = 1080 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 355 ccacgtccacctcccggatc 336
>ref|NM_002067.1| Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class) (GNA11), mRNA Length = 1540 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 541 ccacgtccacctcccggatc 522
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcagtctgcaaaatcatttt 28 |||||||||||||||||||| Sbjct: 17466485 tcagtctgcaaaatcatttt 17466504
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 gatccccaccacgtccacctcccggatc 332 |||| |||||||||||||||||| |||| Sbjct: 27923782 gatcaccaccacgtccacctccccgatc 27923809
>emb|BX255948.4| Zebrafish DNA sequence from clone CH211-250J1, complete sequence Length = 194257 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ttagcaacagtagtagcagt 122 |||||||||||||||||||| Sbjct: 60256 ttagcaacagtagtagcagt 60275
>gb|AC096736.3| Homo sapiens BAC clone RP11-171N4 from 4, complete sequence Length = 172989 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 gcaaaatcattttatttcac 35 |||||||||||||||||||| Sbjct: 131582 gcaaaatcattttatttcac 131563
>emb|BX248087.9| Zebrafish DNA sequence from clone CH211-191J22, complete sequence Length = 150181 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 ttagcaacagtagtagcagt 122 |||||||||||||||||||| Sbjct: 20400 ttagcaacagtagtagcagt 20419
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcagtctgcaaaatcatttt 28 |||||||||||||||||||| Sbjct: 95480 tcagtctgcaaaatcatttt 95499
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcgtcgcggccgcccgcgc 177 |||||||||||||||||||| Sbjct: 2554488 ggcgtcgcggccgcccgcgc 2554469
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 gatccccaccacgtccacctcccggatc 332 |||| |||||||||||||||||| |||| Sbjct: 110463 gatcaccaccacgtccacctccccgatc 110490
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 ggccgcccgcgctgacctggaacg 189 ||||||||||||||||| |||||| Sbjct: 3265805 ggccgcccgcgctgaccaggaacg 3265828
>gb|BC036914.1| Homo sapiens cDNA clone IMAGE:5106460 Length = 1397 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 1024 ccacgtccacctcccggatc 1043
>dbj|AK062840.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H04, full insert sequence Length = 653 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 gatccccaccacgtccacctcccggatc 332 |||| |||||||||||||||||| |||| Sbjct: 240 gatcaccaccacgtccacctccccgatc 213
>gb|DQ256410.2| Sus scrofa guanine nucleotide binding protein alpha 11 mRNA, partial cds Length = 1084 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 359 ccacgtccacctcccggatc 340
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tcgccgccgacgtgagcggc 350 |||||||||||||||||||| Sbjct: 840881 tcgccgccgacgtgagcggc 840900 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 caccacgtccacctcccgga 330 |||||||||||||||||||| Sbjct: 191814 caccacgtccacctcccgga 191833
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tcagtctgcaaaatcatttt 28 |||||||||||||||||||| Sbjct: 17475525 tcagtctgcaaaatcatttt 17475544
>gb|AC005262.1|AC005262 Homo sapiens chromosome 19, cosmid F23990, complete sequence Length = 44235 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 20035 ccacgtccacctcccggatc 20016
>gb|AF011497.1|AF011497 Homo sapiens guanine nucleotide binding protein alpha 11 subunit (G11) mRNA, complete cds Length = 1080 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 355 ccacgtccacctcccggatc 336
>dbj|AB209435.1| Homo sapiens mRNA for Guanine nucleotide-binding protein G, alpha subunit variant protein Length = 1103 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 349 ccacgtccacctcccggatc 330
>gb|M69013.1|HUMGTPBRPA Human guanine nucleotide-binding regulatory protein (G-y-alpha) mRNA, complete cds Length = 1540 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 541 ccacgtccacctcccggatc 522
>gb|BC089041.1| Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class), mRNA (cDNA clone MGC:99679 IMAGE:6085072), complete cds Length = 1615 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccacgtccacctcccggatc 332 |||||||||||||||||||| Sbjct: 597 ccacgtccacctcccggatc 578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,017,486 Number of Sequences: 3902068 Number of extensions: 3017486 Number of successful extensions: 64274 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 63365 Number of HSP's gapped (non-prelim): 911 length of query: 408 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 386 effective length of database: 17,147,199,772 effective search space: 6618819111992 effective search space used: 6618819111992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)