>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  438 bits (221), Expect = e-120
 Identities = 235/242 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtcatcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatct 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1490 gtcatcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatct 1431

                                                                        
Query: 61   tccacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1430 tccacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagc 1371

                                                                        
Query: 121  ttctaaaaaggcgtaaacatgataattaccaaataagtttnnnnnnncgacaagttgagc 180
            ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 1370 ttctaaaaaggcgtaaacatgataattaccaaataagtttaaaaaaacgacaagttgagc 1311

                                                                        
Query: 181  atcggccggcgtcctagatgcatgcatgcatccatgggatttgcggtggatcatgcgagt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 atcggccggcgtcctagatgcatgcatgcatccatgggatttgcggtggatcatgcgagt 1251

              
Query: 241  cc 242
            ||
Sbjct: 1250 cc 1249

>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  202 bits (102), Expect = 4e-49
 Identities = 139/150 (92%), Gaps = 1/150 (0%)
 Strand = Plus / Minus

                                                                        
Query: 3    catcctcaatcaggcctgcggttttattattccaatgtttgccgaaaattgtacatcttc 62
            ||||||||||||| |||||||||||||||||| |  ||| ||||||||||||||||||||
Sbjct: 1472 catcctcaatcagacctgcggttttattattc-atggttcgccgaaaattgtacatcttc 1414

                                                                        
Query: 63   cacacgagatctatgcactctcgcggccactcgcaaggcctctcctgcgtaattgagctt 122
            ||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||| ||
Sbjct: 1413 cacacgagatctacgcactctcgccgacactcgcaaggcctctcccgcgtaattgagttt 1354

                                          
Query: 123  ctaaaaaggcgtaaacatgataattaccaa 152
            ||||||||||||||| ||||||||||||||
Sbjct: 1353 ctaaaaaggcgtaaaaatgataattaccaa 1324

>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase
          Length = 1146

 Score =  131 bits (66), Expect = 1e-27
 Identities = 98/106 (92%), Gaps = 2/106 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3    catcctcaatcaggcctgcggttttattattccaatgttt-gccgaaaattgtacatctt 61
            |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1146 catcctcaattaggcctgcggttttattattccaatggttcgccgaaaattgtacatctt 1087

                                                          
Query: 62   ccacacgagatctatgcactctcgcggccactcgc-aaggcctctc 106
            |||| ||||||||||| |||| ||||| ||||||| ||||||||||
Sbjct: 1086 ccacccgagatctatgtactcccgcggacactcgcaaaggcctctc 1041

>gb|AC104358.4| Homo sapiens chromosome 8, clone RP11-151L10, complete sequence
          Length = 174055

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 197    gatgcatgcatgcatccatggga 219
              |||||||||||||||||||||||
Sbjct: 139458 gatgcatgcatgcatccatggga 139436

>dbj|AP002089.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1100B9
          Length = 151959

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 197   gatgcatgcatgcatccatggga 219
             |||||||||||||||||||||||
Sbjct: 53966 gatgcatgcatgcatccatggga 53944

>dbj|AP005622.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1016F12, complete
              sequence
          Length = 200738

 Score = 46.1 bits (23), Expect = 0.050
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 197    gatgcatgcatgcatccatggga 219
              |||||||||||||||||||||||
Sbjct: 128595 gatgcatgcatgcatccatggga 128573

>gb|AC130675.7| Mus musculus chromosome 8, clone RP23-167D18, complete sequence
          Length = 193579

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 135    aaacatgataattaccaaata 155
              |||||||||||||||||||||
Sbjct: 126070 aaacatgataattaccaaata 126050

>gb|AC145303.4| Mus musculus BAC clone RP23-411P20 from 14, complete sequence
          Length = 190168

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   tagatgcatgcatgcatccat 215
             |||||||||||||||||||||
Sbjct: 31239 tagatgcatgcatgcatccat 31219

>gb|BC079655.1| Mus musculus cDNA clone IMAGE:6854812
          Length = 4411

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  atgcatgcatgcatccatgg 217
            ||||||||||||||||||||
Sbjct: 1039 atgcatgcatgcatccatgg 1058

>gb|AC124417.5| Mus musculus BAC clone RP24-313G11 from chromosome 18, complete
             sequence
          Length = 181811

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    aaattgtacatcttccacac 67
             ||||||||||||||||||||
Sbjct: 24311 aaattgtacatcttccacac 24292

>gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, complete sequence
          Length = 198586

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    tagatgcatgcatgcatcca 214
              ||||||||||||||||||||
Sbjct: 148151 tagatgcatgcatgcatcca 148170

>emb|AL162457.11| Human DNA sequence from clone RP11-429E11 on chromosome 20 Contains
             parts of the CDH4 gene for retinal cadherin 4 type 1
             (R-cadherin), a novel gene, the gene for a novel protien
             (FLJ40547) and a CpG island, complete sequence
          Length = 130965

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tagatgcatgcatgcatcca 214
             ||||||||||||||||||||
Sbjct: 99927 tagatgcatgcatgcatcca 99908

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 197      gatgcatgcatgcatccatg 216
                ||||||||||||||||||||
Sbjct: 17525804 gatgcatgcatgcatccatg 17525785

>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0019B14
          Length = 127570

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   gatgcatgcatgcatccatg 216
             ||||||||||||||||||||
Sbjct: 89982 gatgcatgcatgcatccatg 89963

>emb|AL928676.13| Zebrafish DNA sequence from clone DKEY-121K17, complete sequence
          Length = 176196

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     ttttattattccaatgtttg 43
              ||||||||||||||||||||
Sbjct: 105180 ttttattattccaatgtttg 105199

>emb|AL669956.10| Mouse DNA sequence from clone RP23-222I1 on chromosome X, complete
             sequence
          Length = 199434

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   atgcatgcatgcatccatgg 217
             ||||||||||||||||||||
Sbjct: 19812 atgcatgcatgcatccatgg 19793

>gb|AC100778.5| Homo sapiens chromosome 18, clone RP11-110H1, complete sequence
          Length = 173671

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tagatgcatgcatgcatcca 214
             ||||||||||||||||||||
Sbjct: 28343 tagatgcatgcatgcatcca 28362


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,655,567
Number of Sequences: 3902068
Number of extensions: 1655567
Number of successful extensions: 45513
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45450
Number of HSP's gapped (non-prelim): 60
length of query: 242
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 220
effective length of database: 17,147,199,772
effective search space: 3772383949840
effective search space used: 3772383949840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)