ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet94f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 66 1e-07
2dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
3dbj|AK100791.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
5ref|NM_197197.1| Oryza sativa (japonica cultivar-group) unknown ... 62 2e-06
6ref|XM_959438.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.41
7ref|XM_329361.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.41
8ref|XM_464378.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
9emb|CT010458.8| Mouse DNA sequence from clone RP23-279C9 on chro... 42 1.6
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
11gb|AC154364.2| Mus musculus BAC clone RP24-559G11 from chromosom... 42 1.6
12ref|XM_235710.3| PREDICTED: Rattus norvegicus tensin like C1 dom... 42 1.6
13dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
15emb|AL929086.7| Zebrafish DNA sequence from clone CH211-130K1 in... 42 1.6
16gb|AF533700.1| Plasmodium falciparum 3D7 normocyte-binding prote... 40 6.4
17gb|AF411933.2| Plasmodium falciparum strain 7G8 normocyte-bindin... 40 6.4
18gb|AF411932.2| Plasmodium falciparum strain Malayan Camp K- norm... 40 6.4
19gb|AF411931.2| Plasmodium falciparum strain Dd2 normocyte-bindin... 40 6.4
20gb|AF411930.2| Plasmodium falciparum strain HB3 normocyte-bindin... 40 6.4
21gb|AF411929.2| Plasmodium falciparum strain FVO normocyte-bindin... 40 6.4
22gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, com... 40 6.4
23gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, c... 40 6.4
24gb|AC157910.4| Mus musculus chromosome 18, clone RP24-372A6, com... 40 6.4
25gb|AC099062.2| Homo sapiens chromosome 1 clone RP5-1043L3, compl... 40 6.4
26gb|AC123876.5| Mus musculus BAC clone RP23-270P19 from chromosom... 40 6.4
27gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complet... 40 6.4
28gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 40 6.4
29emb|Z82200.1|HS333E23 Human DNA sequence from clone RP3-333E23 o... 40 6.4
30emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chro... 40 6.4
31emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chro... 40 6.4
32emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 40 6.4
33emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in ... 40 6.4
34gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete se... 40 6.4
35gb|AC068640.29| Homo sapiens 12 BAC RP11-105I4 (Roswell Park Can... 40 6.4
36gb|AC154542.2| Mus musculus BAC clone RP23-458O22 from chromosom... 40 6.4
37gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, comple... 40 6.4
38gb|AC009387.27| Homo sapiens 12 BAC RP11-110L15 (Roswell Park Ca... 40 6.4
39gb|AC154185.1| Mus musculus BAC clone RP24-67L15 from chromosome... 40 6.4
40gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1,... 40 6.4
41emb|AL845296.4| Mouse DNA sequence from clone RP23-121B24 on chr... 40 6.4
42emb|AJ430088.1|PFA430088 Plasmodium falciparum partial rh1 gene,... 40 6.4
43emb|AJ430087.1|PFA430087 Plasmodium falciparum partial rh1 gene,... 40 6.4
44emb|AJ430086.1|PFA430086 Plasmodium falciparum partial rh1 gene,... 40 6.4 
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                         
Query: 163   gagtatctgacttccttcttcttggggtgcggagcgacaatcttcggcgcgtcgacgtgc 222
             ||||| ||||||||||| ||||||| ||| ||   ||| || ||||| || || ||||||
Sbjct: 52890 gagtacctgacttcctttttcttggagtgtgggatgacgattttcggagcatcaacgtgc 52831

                                                                  
Query: 223   atccgcagggagctgaactccagagccaagatgggcctcgataacaagaccat 275
             ||   ||| ||| ||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 52830 atttccagagagttgaactccagagccaagataggcttagataacaagaccat 52778



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 409   actttgcaggagtacttgagaaggtcaggatgatcctctgtctggccgctgaa 461
             |||| ||| |||||||||||||| |||||||| |||||| |||| || |||||
Sbjct: 52436 acttggcaagagtacttgagaagatcaggatggtcctctatctgtccactgaa 52384
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                            
Query: 163      gagtatctgacttccttcttcttggggtgcggagcgacaatcttcggcgcgtcgacgtgc 222
                ||||| ||||||||||| ||||||| ||| ||   ||| || ||||| || || ||||||
Sbjct: 18549879 gagtacctgacttcctttttcttggagtgtgggatgacgattttcggagcatcaacgtgc 18549820

                                                                     
Query: 223      atccgcagggagctgaactccagagccaagatgggcctcgataacaagaccat 275
                ||   ||| ||| ||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 18549819 atttccagagagttgaactccagagccaagataggcttagataacaagaccat 18549767



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 409      actttgcaggagtacttgagaaggtcaggatgatcctctgtctggccgctgaa 461
                |||| ||| |||||||||||||| |||||||| |||||| |||| || |||||
Sbjct: 18549425 acttggcaagagtacttgagaagatcaggatggtcctctatctgtccactgaa 18549373
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>dbj|AK100791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A22, full
            insert sequence
          Length = 1462

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                        
Query: 163  gagtatctgacttccttcttcttggggtgcggagcgacaatcttcggcgcgtcgacgtgc 222
            ||||| ||||||||||| ||||||| ||| ||   ||| || ||||| || || ||||||
Sbjct: 1199 gagtacctgacttcctttttcttggagtgtgggatgacgattttcggagcatcaacgtgc 1140

                                                                 
Query: 223  atccgcagggagctgaactccagagccaagatgggcctcgataacaagaccat 275
            ||   ||| ||| ||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 1139 atttccagagagttgaactccagagccaagataggcttagataacaagaccat 1087



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 388 accggccgcaccttgcactctactttgcaggagtacttgagaaggtcaggatgatcctct 447
           ||||| |||||  |||| || |||| ||| |||||||||||||| |||||||| ||||||
Sbjct: 968 accgggcgcactctgcattccacttggcaagagtacttgagaagatcaggatggtcctct 909

                            
Query: 448 gtctggccgctgaagct 464
            |||| || ||||||||
Sbjct: 908 atctgtccactgaagct 892
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Minus

                                                                            
Query: 163      gagtatctgacttccttcttcttggggtgcggagcgacaatcttcggcgcgtcgacgtgc 222
                ||||| ||||||||||| ||||||| ||| ||   ||| || ||||| || || ||||||
Sbjct: 18559932 gagtacctgacttcctttttcttggagtgtgggatgacgattttcggagcatcaacgtgc 18559873

                                                                     
Query: 223      atccgcagggagctgaactccagagccaagatgggcctcgataacaagaccat 275
                ||   ||| ||| ||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 18559872 atttccagagagttgaactccagagccaagataggcttagataacaagaccat 18559820



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 409      actttgcaggagtacttgagaaggtcaggatgatcctctgtctggccgctgaa 461
                |||| ||| |||||||||||||| |||||||| |||||| |||| || |||||
Sbjct: 18559478 acttggcaagagtacttgagaagatcaggatggtcctctatctgtccactgaa 18559426
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>ref|NM_197197.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0078O01.15), mRNA
          Length = 1158

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                       
Query: 169 ctgacttccttcttcttggggtgcggagcgacaatcttcggcgcgtcgacgtgcatccgc 228
           ||||||||||| ||||||| ||| ||   ||| || ||||| || || ||||||||   |
Sbjct: 944 ctgacttcctttttcttggagtgtgggatgacgattttcggagcatcaacgtgcatttcc 885

                                                          
Query: 229 agggagctgaactccagagccaagatgggcctcgataacaagaccat 275
           || ||| ||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 884 agagagttgaactccagagccaagataggcttagataacaagaccat 838



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 388 accggccgcaccttgcactctactttgcaggagtacttgagaaggtcaggatgatcctct 447
           ||||| |||||  |||| || |||| ||| |||||||||||||| |||||||| ||||||
Sbjct: 719 accgggcgcactctgcattccacttggcaagagtacttgagaagatcaggatggtcctct 660

                            
Query: 448 gtctggccgctgaagct 464
            |||| || ||||||||
Sbjct: 659 atctgtccactgaagct 643
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>ref|XM_959438.1| Neurospora crassa OR74A hypothetical protein (NCU02172.1) partial
            mRNA
          Length = 3195

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 306  ttcagacccggcgccgctgctc 327
            ||||||||||||||||||||||
Sbjct: 2187 ttcagacccggcgccgctgctc 2166
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>ref|XM_329361.1| Neurospora crassa OR74A hypothetical protein (NCU02172.1) partial
            mRNA
          Length = 3195

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 306  ttcagacccggcgccgctgctc 327
            ||||||||||||||||||||||
Sbjct: 2187 ttcagacccggcgccgctgctc 2166
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>ref|XM_464378.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1530

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 313  ccggcgccgctgctcctgccg 333
            |||||||||||||||||||||
Sbjct: 1108 ccggcgccgctgctcctgccg 1128
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>emb|CT010458.8| Mouse DNA sequence from clone RP23-279C9 on chromosome 13, complete
              sequence
          Length = 240541

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 366    gctccagacctttgctggact 386
              |||||||||||||||||||||
Sbjct: 129745 gctccagacctttgctggact 129725
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 313     ccggcgccgctgctcctgccg 333
               |||||||||||||||||||||
Sbjct: 4825430 ccggcgccgctgctcctgccg 4825450
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>gb|AC154364.2| Mus musculus BAC clone RP24-559G11 from chromosome 13, complete
             sequence
          Length = 133661

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 366   gctccagacctttgctggact 386
             |||||||||||||||||||||
Sbjct: 76381 gctccagacctttgctggact 76401
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>ref|XM_235710.3| PREDICTED: Rattus norvegicus tensin like C1 domain containing
            phosphatase (predicted) (Tenc1_predicted), mRNA
          Length = 4958

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 317  cgccgctgctcctgccgtcag 337
            |||||||||||||||||||||
Sbjct: 2128 cgccgctgctcctgccgtcag 2148
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>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1115_B01
          Length = 129329

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 313    ccggcgccgctgctcctgccg 333
              |||||||||||||||||||||
Sbjct: 106020 ccggcgccgctgctcctgccg 106040
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>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1073_F05
          Length = 124252

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   ccggcgccgctgctcctgccg 333
             |||||||||||||||||||||
Sbjct: 67589 ccggcgccgctgctcctgccg 67609
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>emb|AL929086.7| Zebrafish DNA sequence from clone CH211-130K1 in linkage group 3,
            complete sequence
          Length = 174740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 81   atgaacaaatgaaagaacaacagac 105
            |||||||||||||||| ||||||||
Sbjct: 4430 atgaacaaatgaaagatcaacagac 4454
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>gb|AF533700.1| Plasmodium falciparum 3D7 normocyte-binding protein 1 (NBP1) gene,
            complete cds
          Length = 9022

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgaacaaatgaaagaacaa 100
            ||||||||||||||||||||
Sbjct: 8562 atgaacaaatgaaagaacaa 8581
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>gb|AF411933.2| Plasmodium falciparum strain 7G8 normocyte-binding protein 1 (NBP1)
            gene, complete cds
          Length = 9044

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgaacaaatgaaagaacaa 100
            ||||||||||||||||||||
Sbjct: 8548 atgaacaaatgaaagaacaa 8567
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>gb|AF411932.2| Plasmodium falciparum strain Malayan Camp K- normocyte-binding
            protein 1 (NBP1) gene, complete cds
          Length = 9003

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgaacaaatgaaagaacaa 100
            ||||||||||||||||||||
Sbjct: 8537 atgaacaaatgaaagaacaa 8556
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>gb|AF411931.2| Plasmodium falciparum strain Dd2 normocyte-binding protein 1 (NBP1)
            gene, complete cds
          Length = 8979

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgaacaaatgaaagaacaa 100
            ||||||||||||||||||||
Sbjct: 8519 atgaacaaatgaaagaacaa 8538
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>gb|AF411930.2| Plasmodium falciparum strain HB3 normocyte-binding protein 1 (NBP1)
            gene, complete cds
          Length = 9024

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgaacaaatgaaagaacaa 100
            ||||||||||||||||||||
Sbjct: 8534 atgaacaaatgaaagaacaa 8553
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>gb|AF411929.2| Plasmodium falciparum strain FVO normocyte-binding protein 1 (NBP1)
            gene, complete cds
          Length = 9049

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   atgaacaaatgaaagaacaa 100
            ||||||||||||||||||||
Sbjct: 8558 atgaacaaatgaaagaacaa 8577
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>gb|AC105966.11| Mus musculus chromosome 3, clone RP23-403H2, complete sequence
          Length = 201376

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aacaaatgaaagaacaacag 103
              ||||||||||||||||||||
Sbjct: 186332 aacaaatgaaagaacaacag 186313
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>gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, complete sequence
          Length = 172481

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   cagggagctgaactccagag 247
             ||||||||||||||||||||
Sbjct: 95837 cagggagctgaactccagag 95818
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>gb|AC157910.4| Mus musculus chromosome 18, clone RP24-372A6, complete sequence
          Length = 180725

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   cagggagctgaactccagag 247
             ||||||||||||||||||||
Sbjct: 22271 cagggagctgaactccagag 22252
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>gb|AC099062.2| Homo sapiens chromosome 1 clone RP5-1043L3, complete sequence
          Length = 101840

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    atgaacaaatgaaagaacaa 100
             ||||||||||||||||||||
Sbjct: 73634 atgaacaaatgaaagaacaa 73615
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>gb|AC123876.5| Mus musculus BAC clone RP23-270P19 from chromosome 3, complete sequence
          Length = 203639

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     tgccaaactatgaatgaatt 31
              ||||||||||||||||||||
Sbjct: 140317 tgccaaactatgaatgaatt 140298
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>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence
          Length = 115045

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aacaaatgaaagaacaacag 103
             ||||||||||||||||||||
Sbjct: 84815 aacaaatgaaagaacaacag 84834
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>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 84     aacaaatgaaagaacaacag 103
              ||||||||||||||||||||
Sbjct: 153452 aacaaatgaaagaacaacag 153433
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>emb|Z82200.1|HS333E23 Human DNA sequence from clone RP3-333E23 on chromosome Xq21.1 Contains
             the P2RY10 gene for purinergic receptor P2Y G-protein
             coupled 10, complete sequence
          Length = 128011

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    tatgaacaaatgaaagaaca 99
             ||||||||||||||||||||
Sbjct: 82516 tatgaacaaatgaaagaaca 82535
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>emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chromosome X Contains the
            5' end of a novel gene and a CpG island, complete
            sequence
          Length = 166016

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   aaatgaaagaacaacagaca 106
            ||||||||||||||||||||
Sbjct: 2985 aaatgaaagaacaacagaca 2966
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>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2,
              complete sequence
          Length = 144177

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     tatgaacaaatgaaagaaca 99
              ||||||||||||||||||||
Sbjct: 138593 tatgaacaaatgaaagaaca 138574
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>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1
          Length = 347582

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     atgaacaaatgaaagaacaa 100
              ||||||||||||||||||||
Sbjct: 152652 atgaacaaatgaaagaacaa 152671
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>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5,
             complete sequence
          Length = 156095

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    atgaacaaatgaaagaacaa 100
             ||||||||||||||||||||
Sbjct: 89102 atgaacaaatgaaagaacaa 89121
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>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   cggcgccgctgctcctgccg 333
             ||||||||||||||||||||
Sbjct: 22950 cggcgccgctgctcctgccg 22931
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>gb|AC068640.29| Homo sapiens 12 BAC RP11-105I4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 99930

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    atgaacaaatgaaagaacaa 100
             ||||||||||||||||||||
Sbjct: 17879 atgaacaaatgaaagaacaa 17898
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>gb|AC154542.2| Mus musculus BAC clone RP23-458O22 from chromosome 17, complete sequence
          Length = 191836

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     atgaacaaatgaaagaacaa 100
              ||||||||||||||||||||
Sbjct: 180521 atgaacaaatgaaagaacaa 180502
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>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence
          Length = 188780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 74   gcaacctatgaacaaatgaaagaa 97
            ||||||| ||||||||||||||||
Sbjct: 2614 gcaacctttgaacaaatgaaagaa 2637
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>gb|AC009387.27| Homo sapiens 12 BAC RP11-110L15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99867

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    atgaacaaatgaaagaacaa 100
             ||||||||||||||||||||
Sbjct: 17893 atgaacaaatgaaagaacaa 17912
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>gb|AC154185.1| Mus musculus BAC clone RP24-67L15 from chromosome 17, complete sequence
          Length = 167726

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    atgaacaaatgaaagaacaa 100
             ||||||||||||||||||||
Sbjct: 15706 atgaacaaatgaaagaacaa 15687
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>gb|AC007912.6|AC007912 Homo sapiens chromosome , clone RP11-8A1, complete sequence
          Length = 171255

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     atgaacaaatgaaagaacaa 100
              ||||||||||||||||||||
Sbjct: 122663 atgaacaaatgaaagaacaa 122682
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>emb|AL845296.4| Mouse DNA sequence from clone RP23-121B24 on chromosome 2, complete
             sequence
          Length = 203414

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 171   gacttccttcttcttggggt 190
             ||||||||||||||||||||
Sbjct: 69828 gacttccttcttcttggggt 69809
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>emb|AJ430088.1|PFA430088 Plasmodium falciparum partial rh1 gene, isolate FCB1
          Length = 427

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  atgaacaaatgaaagaacaa 100
           ||||||||||||||||||||
Sbjct: 287 atgaacaaatgaaagaacaa 306
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>emb|AJ430087.1|PFA430087 Plasmodium falciparum partial rh1 gene, isolate T996
          Length = 409

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  atgaacaaatgaaagaacaa 100
           ||||||||||||||||||||
Sbjct: 287 atgaacaaatgaaagaacaa 306
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>emb|AJ430086.1|PFA430086 Plasmodium falciparum partial rh1 gene, isolate 3D7
          Length = 397

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  atgaacaaatgaaagaacaa 100
           ||||||||||||||||||||
Sbjct: 287 atgaacaaatgaaagaacaa 306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,015,045
Number of Sequences: 3902068
Number of extensions: 4015045
Number of successful extensions: 92766
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92618
Number of HSP's gapped (non-prelim): 143
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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