ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KAD_SALTY (P0A1V4) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 30 3.0
2KAD_SALTI (P0A1V5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 30 3.0
3KAD_ECOLI (P69441) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 30 3.0
4KAD_ECOL6 (Q8FK84) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 30 3.0
5KAD_ECO57 (P69442) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 30 3.0
6SP3_MOUSE (O70494) Transcription factor Sp3 29 5.1
7KAD_ERWCT (Q6D7Z5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 28 6.7
8CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel al... 28 8.8
9RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A ... 28 8.8
10IL7RA_MOUSE (P16872) Interleukin-7 receptor alpha chain precurso... 28 8.8
11ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Aggl... 28 8.8

>KAD_SALTY (P0A1V4) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 214

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LKERIAGELCRGIVVLDGAPAGIEEQDA 336
           +KERIA E CR   +LDG P  I + DA
Sbjct: 68  VKERIAQEDCRNGFLLDGFPRTIPQADA 95



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>KAD_SALTI (P0A1V5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 214

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LKERIAGELCRGIVVLDGAPAGIEEQDA 336
           +KERIA E CR   +LDG P  I + DA
Sbjct: 68  VKERIAQEDCRNGFLLDGFPRTIPQADA 95



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>KAD_ECOLI (P69441) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
           (AK)
          Length = 214

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LKERIAGELCRGIVVLDGAPAGIEEQDA 336
           +KERIA E CR   +LDG P  I + DA
Sbjct: 68  VKERIAQEDCRNGFLLDGFPRTIPQADA 95



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>KAD_ECOL6 (Q8FK84) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 214

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LKERIAGELCRGIVVLDGAPAGIEEQDA 336
           +KERIA E CR   +LDG P  I + DA
Sbjct: 68  VKERIAQEDCRNGFLLDGFPRTIPQADA 95



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>KAD_ECO57 (P69442) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
           (AK)
          Length = 214

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LKERIAGELCRGIVVLDGAPAGIEEQDA 336
           +KERIA E CR   +LDG P  I + DA
Sbjct: 68  VKERIAQEDCRNGFLLDGFPRTIPQADA 95



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>SP3_MOUSE (O70494) Transcription factor Sp3|
          Length = 783

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 338 AFTCVAVGPPQPGDGDARA 282
           A TC  +GPP PGD D  A
Sbjct: 62  AATCSKIGPPSPGDDDEEA 80



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>KAD_ERWCT (Q6D7Z5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 214

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 419 LKERIAGELCRGIVVLDGAPAGIEEQDA 336
           +KERIA + CR   +LDG P  I + DA
Sbjct: 68  VKERIAQDDCRNGFLLDGFPRTIPQADA 95



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>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
            (Cav3.1c) (NBR13)
          Length = 2377

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = -2

Query: 385  GSSSSMAHPPALRNRTHSP-----AWQSARLSPETATRGPETR 272
            G++  M  PP+ R+  HSP     +W S R S  +  R P  +
Sbjct: 1078 GAAHEMKSPPSARSSPHSPWSAASSWTSRRSSRNSLGRAPSLK 1120



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>RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A (hHR23A)|
          Length = 363

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 409 ESLENFAEGSSSSMAHPPALRNRTHSPAWQSA-RLSPETAT 290
           ES  +F    +S M+HPP       SP+ +SA   SPE+ +
Sbjct: 98  ESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTSPESVS 138



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>IL7RA_MOUSE (P16872) Interleukin-7 receptor alpha chain precursor (IL-7R-alpha)|
           (CD127 antigen)
          Length = 459

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 367 AHPPALRNRTHSPAWQSARLSPETATRGPET 275
           A P  L  + H  A  SA  SPET+   PET
Sbjct: 330 AQPEELETQGHRAAVHSANRSPETSVSPPET 360



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>ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Agglutinin-like|
           adhesin)
          Length = 1419

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 409 ESLENFAEGSSSSMAHPPALRNRTHSPAWQSARLSPETATRGPE 278
           E++ N  EG+ S +   P     T +  W  +  + ET T GPE
Sbjct: 560 ETITNKPEGTDSVIVKEPYNPTVTTTEFWSESYATTETITNGPE 603


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.123    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,586,778
Number of Sequences: 219361
Number of extensions: 483602
Number of successful extensions: 1884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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