ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAPS3_CHICK (Q5F471) SAPS domain family member 3 63 3e-10
2SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-in... 62 4e-10
3SAPS3_MOUSE (Q922D4) SAPS domain family member 3 62 4e-10
4SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2 61 1e-09
5SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B 59 4e-09
6SAPS2_HUMAN (O75170) SAPS domain family member 2 59 5e-09
7SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A 59 5e-09
8SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1 58 8e-09
9SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1 57 2e-08
10K0853_HUMAN (Q5T200) Protein KIAA0853 30 2.3
11MYOB_DICDI (P34092) Myosin IB heavy chain 30 3.0
12P53_HORSE (P79892) Cellular tumor antigen p53 (Tumor suppressor ... 30 3.0
13EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimul... 30 3.0
14ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 prot... 29 3.9
15ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 prot... 29 3.9
16AGRN_CHICK (P31696) Agrin (Fragment) 28 6.7
17EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimul... 28 6.7
18ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 prot... 28 8.8
19P53_EQUAS (Q29480) Cellular tumor antigen p53 (Tumor suppressor ... 28 8.8
20TTC3_HUMAN (P53804) Tetratricopeptide repeat protein 3 (TPR repe... 28 8.8
21RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain... 28 8.8
22COME_HAEIN (P31772) Competence protein E precursor (DNA transfor... 28 8.8

>SAPS3_CHICK (Q5F471) SAPS domain family member 3|
          Length = 873

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 27/71 (38%), Positives = 45/71 (63%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L++E+ T         ++QECKA N +LI FL     +E L+ +++EE P D ++K
Sbjct: 13  IDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVSFIIEEPPQDMDEK 72

Query: 389 RSFKFPFIACE 421
             +K+P I+CE
Sbjct: 73  IRYKYPNISCE 83



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>SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-induced|
           transcript 4-associated protein SAPL) (Protein
           phosphatase 6 regulatory subunit 3)
          Length = 873

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 27/71 (38%), Positives = 45/71 (63%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L++E+ T         ++QECKA N +LI FL     +E L+ +++EE P D ++K
Sbjct: 13  IDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVSFIIEEPPQDMDEK 72

Query: 389 RSFKFPFIACE 421
             +K+P I+CE
Sbjct: 73  IRYKYPNISCE 83



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>SAPS3_MOUSE (Q922D4) SAPS domain family member 3|
          Length = 844

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 27/71 (38%), Positives = 45/71 (63%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L++E+ T         ++QECKA N +LI FL     +E L+ +++EE P D ++K
Sbjct: 13  IDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVSFIIEEPPQDMDEK 72

Query: 389 RSFKFPFIACE 421
             +K+P I+CE
Sbjct: 73  IRYKYPNISCE 83



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>SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2|
          Length = 923

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 29/71 (40%), Positives = 44/71 (61%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           VD +LDKE+ T         I+QECKA N +L++FL  +  +E+L+  + ++ P D E+K
Sbjct: 13  VDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVNLITQDPPQDMEEK 72

Query: 389 RSFKFPFIACE 421
             FK+P  ACE
Sbjct: 73  VRFKYPNTACE 83



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>SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B|
          Length = 850

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 25/71 (35%), Positives = 43/71 (60%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L+++  T         I+QECKA N +L+ FL     +E L+ ++ EE P D ++K
Sbjct: 13  IDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVTFITEEPPQDMDEK 72

Query: 389 RSFKFPFIACE 421
             +K+P ++CE
Sbjct: 73  IRYKYPNLSCE 83



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>SAPS2_HUMAN (O75170) SAPS domain family member 2|
          Length = 927

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 29/71 (40%), Positives = 44/71 (61%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           VD +LDKE+ T         I+QECKA N +L++FL  +  +E+L+  + ++ P D E+K
Sbjct: 13  VDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVSLITQDPPLDMEEK 72

Query: 389 RSFKFPFIACE 421
             FK+P  ACE
Sbjct: 73  VRFKYPNTACE 83



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>SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A|
          Length = 852

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 25/71 (35%), Positives = 43/71 (60%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L+++  T         I+QECKA N +L+ FL     +E L+ ++ EE P D ++K
Sbjct: 13  IDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVTFITEEPPQDMDEK 72

Query: 389 RSFKFPFIACE 421
             +K+P ++CE
Sbjct: 73  IRYKYPNLSCE 83



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>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 22/71 (30%), Positives = 45/71 (63%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L++E+ +         ++QECK +N +L++FL     ++ ++ +V +E PD  E++
Sbjct: 13  LDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVAWVTQEPPDSGEER 72

Query: 389 RSFKFPFIACE 421
             +K+P +ACE
Sbjct: 73  LRYKYPSVACE 83



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>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1|
          Length = 856

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 22/71 (30%), Positives = 45/71 (63%)
 Frame = +2

Query: 209 VDTILDKENFTXXXXXXXXXIIQECKALNTRLINFLRDKAQVEQLLRYVVEEVPDDAEKK 388
           +DT+L+KE+ +         ++QECK +N +L++FL   + ++ ++ +V +E P   E++
Sbjct: 13  LDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVAWVTQEPPASGEER 72

Query: 389 RSFKFPFIACE 421
             +K+P +ACE
Sbjct: 73  LRYKYPSVACE 83



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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = -2

Query: 215 YPPRSRSAPENKIRASEHYTTQVRHPIHSVNLNKWVHDQARSHR-STKGRTDEQTNLRER 39
           YP  S S+P+ K     H +       H        HD+    R  T+G+ D + + RE 
Sbjct: 374 YPSHSLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREE 433

Query: 38  R 36
           R
Sbjct: 434 R 434



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>MYOB_DICDI (P34092) Myosin IB heavy chain|
          Length = 1111

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = -1

Query: 201  SQRTREQNKSKRALYNPSAAPNPQCQSKQMGSRPSSQPPQHKGA 70
            S R   Q  + R    P  A  PQ Q  Q   RP  QP Q  GA
Sbjct: 934  SSRPAPQQSAGRGRGMPQGAGQPQPQQPQQQQRPMPQPQQGGGA 977



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>P53_HORSE (P79892) Cellular tumor antigen p53 (Tumor suppressor p53)|
           (Fragment)
          Length = 280

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 204 QSQRTREQNKSKRALYNPSAAPNPQCQSKQMGSRPSSQPPQHK 76
           + +RT E+N  K+    P   P P+   + + S  SS PPQ K
Sbjct: 231 RDRRTEEENFRKKE--EPCPEPPPRSTKRVLSSNTSSSPPQKK 271



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>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 416

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 207 SQSQRTREQNKSKRALYNPSAAPNPQCQSKQMGSRPSSQPPQHKGA 70
           SQS +  E+ + +  + +PS +P+P       G+R +SQPP    A
Sbjct: 283 SQSDKPAEKKEDESQMEDPSTSPSP-------GTRAASQPPNSSEA 321



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>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
            (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 153  PSAAPNPQCQSKQMGSRPSSQPPQH 79
            PSA P  Q QS+  GS P+  P QH
Sbjct: 1148 PSATPTGQQQSQHGGSHPAPSPVQH 1172



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>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 153  PSAAPNPQCQSKQMGSRPSSQPPQH 79
            PSA P  Q QS+  GS P+  P QH
Sbjct: 1122 PSATPTGQQQSQHGGSHPAPSPVQH 1146



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>AGRN_CHICK (P31696) Agrin (Fragment)|
          Length = 1955

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = +2

Query: 86  GGCELGREPICLD*HCGLGAALGLYNARLLLFCSRVRCDCEVDTILDKENFT 241
           G C+LG    CL   C  GA   + N   +  C +V C    D +   +N T
Sbjct: 342 GPCDLGTPSPCLSVECTFGATCVVKNREPVCECQQV-CQGRYDPVCGSDNRT 392



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>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated|
           phosphoprotein-like)
          Length = 422

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 207 SQSQRTREQNKSKRALYNPSAAPNPQCQSKQMGSRPSSQPPQHKGA 70
           SQS +  E+ + +    +PS +P+P       G+R +SQPP    A
Sbjct: 289 SQSDKPAEKKEDESQTEDPSTSPSP-------GTRAASQPPNSSEA 327



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>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)|
          Length = 892

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -1

Query: 174 SKRALYNPSAAPNPQCQSKQMGSRPSSQPPQHK 76
           SK   + PS    P C ++Q GS P   PP H+
Sbjct: 443 SKPKPHTPSLPRPPGCPAQQGGSAPIDPPPVHE 475



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>P53_EQUAS (Q29480) Cellular tumor antigen p53 (Tumor suppressor p53)|
           (Fragment)
          Length = 207

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 204 QSQRTREQNKSKRALYNPSAAPNPQCQSKQMGSRPSSQPPQ 82
           + +RT E+N  K+    P   P P+   + + S  SS PPQ
Sbjct: 156 RDRRTEEENFRKKE--EPCPEPPPRSTKRVLSSNTSSSPPQ 194



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>TTC3_HUMAN (P53804) Tetratricopeptide repeat protein 3 (TPR repeat protein 3)|
           (TPR repeat protein D)
          Length = 2025

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 129 CQSKQMGSRPSSQPPQHKGAD-GRTNQS 49
           C      S PSSQPP+HKG    R N+S
Sbjct: 422 CDCHPEFSPPSSQPPKHKGKQKSRNNES 449



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>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast|
           precursor (EC 4.1.1.39) (RuBisCO small subunit)
          Length = 183

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -3

Query: 205 AVAAHPRTK*EQASIIQPKCGTQSTVSI*TNGFTTKLAATAAQRGGR 65
           AVA   R    QAS++ P  G +ST +  T   TT    + A  GGR
Sbjct: 10  AVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGR 56



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>COME_HAEIN (P31772) Competence protein E precursor (DNA transformation protein|
           comE)
          Length = 445

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -3

Query: 256 KKFFKCKIFLV*DCIHLAVAAHPRTK*EQ 170
           K F KC  FLV  C+ L V A+P+T  E+
Sbjct: 3   KYFLKCGYFLVCFCLPLIVFANPKTDNER 31


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,991,087
Number of Sequences: 219361
Number of extensions: 1033035
Number of successful extensions: 3166
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3164
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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