ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56h09 |
|---|---|
| Clone Library Name | barley_pub |
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 76.6 bits (187), Expect(2) = 2e-29 Identities = 34/48 (70%), Positives = 43/48 (89%) Frame = +1 Query: 223 NLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 +LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKNNHA+EF Sbjct: 75 SLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAAEF 120 Score = 70.5 bits (171), Expect(2) = 2e-29 Identities = 34/49 (69%), Positives = 41/49 (83%) Frame = +3 Query: 75 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRG 221 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRG Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRG 49
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 75.1 bits (183), Expect(2) = 5e-28 Identities = 34/48 (70%), Positives = 43/48 (89%) Frame = +1 Query: 223 NLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 +LEQWL ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN+H++EF Sbjct: 76 SLEQWLT-SSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKNHHSNEF 122 Score = 67.0 bits (162), Expect(2) = 5e-28 Identities = 30/49 (61%), Positives = 39/49 (79%) Frame = +3 Query: 75 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRG 221 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+G Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKG 50
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 71.2 bits (173), Expect(2) = 2e-27 Identities = 32/47 (68%), Positives = 40/47 (85%) Frame = +1 Query: 226 LEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N H+SEF Sbjct: 78 LEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSSEF 122 Score = 68.9 bits (167), Expect(2) = 2e-27 Identities = 30/49 (61%), Positives = 39/49 (79%) Frame = +3 Query: 75 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRG 221 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+G Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKG 51
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 57.8 bits (138), Expect(2) = 1e-17 Identities = 27/47 (57%), Positives = 34/47 (72%) Frame = +1 Query: 226 LEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN H +EF Sbjct: 76 LESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHLNEF 120 Score = 49.7 bits (117), Expect(2) = 1e-17 Identities = 23/48 (47%), Positives = 35/48 (72%) Frame = +3 Query: 75 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGR 218 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQ 50
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 58.9 bits (141), Expect(2) = 3e-14 Identities = 27/48 (56%), Positives = 38/48 (79%) Frame = +1 Query: 223 NLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 NLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN+H+++F Sbjct: 75 NLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHSTKF 120 Score = 37.0 bits (84), Expect(2) = 3e-14 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = +3 Query: 75 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLG 215 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFG 47
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 47.4 bits (111), Expect(2) = 6e-13 Identities = 22/48 (45%), Positives = 32/48 (66%) Frame = +1 Query: 223 NLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 +LE W+ T + +T GE+ F VTFD+ D G PGA +++N+H SEF Sbjct: 79 HLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNSHFSEF 123 Score = 43.9 bits (102), Expect(2) = 6e-13 Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 3/43 (6%) Frame = +3 Query: 96 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLG 215 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLG 51
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 45.8 bits (107), Expect(2) = 8e-13 Identities = 23/47 (48%), Positives = 31/47 (65%) Frame = +1 Query: 226 LEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 LE +LL L + GE F VTFDW+ ++ GVPGA ++KN H +EF Sbjct: 78 LENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKNMHINEF 121 Score = 45.1 bits (105), Expect(2) = 8e-13 Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 5/50 (10%) Frame = +3 Query: 84 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGR 218 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQ 50
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 43.5 bits (101), Expect(2) = 2e-10 Identities = 20/40 (50%), Positives = 25/40 (62%) Frame = +1 Query: 247 TNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 T P E F VTFDW+ ++ GVPGA I+KN H +EF Sbjct: 84 TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKNMHINEF 122 Score = 39.3 bits (90), Expect(2) = 2e-10 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%) Frame = +3 Query: 84 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGR 218 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQ 50
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 37.0 bits (84), Expect(2) = 9e-08 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = +1 Query: 247 TNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 ++LP + G++ F + F+W D +G+PGA +KN +EF Sbjct: 90 SSLPTLGAGQSAFKIHFEWD-DDMGIPGAFYIKNFMQTEF 128 Score = 36.6 bits (83), Expect(2) = 9e-08 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 14/69 (20%) Frame = +3 Query: 90 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGEP 227 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 228 GAMAPADEP 254 + A +P Sbjct: 63 LQLISATKP 71
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 36.6 bits (83), Expect(2) = 2e-07 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +1 Query: 271 GENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 GE+ F V F+W + G+PGA++V N++ SEF Sbjct: 97 GESVFRVAFEWD-ESQGIPGAVVVTNSNRSEF 127 Score = 36.2 bits (82), Expect(2) = 2e-07 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Frame = +3 Query: 75 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGE 224 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG E Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKE 56
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 35.0 bits (79), Expect(2) = 1e-06 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 19/61 (31%) Frame = +3 Query: 93 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 215 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 216 R 218 R Sbjct: 64 R 64 Score = 34.7 bits (78), Expect(2) = 1e-06 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +1 Query: 250 NLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 +LP + GE+ F + F+W ++G+PGA +KN EF Sbjct: 96 SLPTLGAGESAFNIHFEWD-HEMGIPGAFYIKNYMQVEF 133
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 36.2 bits (82), Expect(2) = 6e-06 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = +1 Query: 247 TNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 T+LP + GE+ F + F+W +G+PGA +KN EF Sbjct: 69 TSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKNYMQVEF 107 Score = 31.2 bits (69), Expect(2) = 6e-06 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +3 Query: 114 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGR 218 G +KG+VVLM KN L+ N G+ V D + LGR Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGR 38
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 33.5 bits (75), Expect(2) = 1e-05 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +1 Query: 247 TNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 T+LP + G++ F + F+W D G+ GA +KN +EF Sbjct: 87 TSLPTLGAGQSAFKINFEWD-DGSGILGAFYIKNFMQTEF 125 Score = 32.7 bits (73), Expect(2) = 1e-05 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 15/56 (26%) Frame = +3 Query: 96 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGR 218 + GGL RG +KG+VVLMRKN L N D + +D +T LGR Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGR 56
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 40.8 bits (94), Expect = 8e-04 Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +3 Query: 66 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFGATVMDGVTELLGRG 221 MF V G+ L G G H +KG+VVLMRKN LDFN V L+G G Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTG 51 Score = 35.8 bits (81), Expect = 0.026 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +1 Query: 250 NLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 +LP + GE+ F + F+W + +G+PGA +KN EF Sbjct: 100 SLPTLGAGESAFNIQFEWD-ESMGIPGAFYIKNYMQVEF 137
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 22/35 (62%) Frame = +3 Query: 111 RGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLG 215 RG +KG+VVLM KN DFN+F +T G+ G Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAG 41 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 250 NLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 +LP + ++ F V F+W + G+P A +KN SEF Sbjct: 96 SLPNLGDRQDAFNVYFEWD-ENFGIPEAFYIKNFMQSEF 133
>FABH_SYNEL (Q8DKL4) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 329 Score = 35.4 bits (80), Expect = 0.034 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = -1 Query: 344 LTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFAAAEELGDAVHDGGAEVVE 165 LT+ GTP + + F+P+ MNGR V R ++ E + A+H G V E Sbjct: 191 LTLAFAGTPQTLGENLAIAQGGFAPITMNGREVYRFAVTQ--VPEVIEKALHRAGCTVEE 248 Query: 164 VERVLAHE 141 ++ ++ H+ Sbjct: 249 IDWLVLHQ 256
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 35.4 bits (80), Expect = 0.034 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +1 Query: 253 LPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 LP + GE + V F+W D G+PGA +KN +EF Sbjct: 85 LPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKNFMQNEF 121 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +3 Query: 105 GLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTE 206 G +G +KG++V+M+KN LD N T + G+ + Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSI--TSVGGIVD 36
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 35.4 bits (80), Expect = 0.034 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 4/41 (9%) Frame = +3 Query: 111 RGAHLKGSVVLMRKNALDFNDFGAT----VMDGVTELLGRG 221 +G +KG+VVLM KN LDFN + V+D T +LG+G Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQG 47 Score = 32.7 bits (73), Expect = 0.22 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 241 LPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEF 366 LPT LP + ++ F++ F+W G+PGA +KN EF Sbjct: 94 LPT-LPTLGARQDAFSIFFEWDAS-FGIPGAFYIKNFMTDEF 133
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 35.0 bits (79), Expect = 0.045 Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = -1 Query: 212 EELGDAVHD-----GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSIS 51 E LGD + D GG EV + + L HED+ L EAPR AAD RS Sbjct: 118 ERLGDVLSDINCDGGGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTC 177 Query: 50 GECGTLAKLARCGA 9 + ARCGA Sbjct: 178 PAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 35.0 bits (79), Expect = 0.045 Identities = 28/74 (37%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = -1 Query: 212 EELGDAVHD-----GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSIS 51 E LGD + D GG EV + + L HED+ L EAPR AAD RS Sbjct: 118 ERLGDVLSDINCDGGGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTC 177 Query: 50 GECGTLAKLARCGA 9 + ARCGA Sbjct: 178 PAPRKAPEDARCGA 191
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 31.2 bits (69), Expect = 0.64 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +3 Query: 111 RGAHLKGSVVLMRKNALDFN 170 RG LKG+V+LM+KN LD N Sbjct: 8 RGQKLKGTVILMQKNVLDIN 27
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 1.9 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -1 Query: 188 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 48 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 196 PSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 71 PS AP + + R+ PL W P+R ++L+ PPTP Sbjct: 259 PSGDTAPPARPHTPLSRIDVRPPLDWGPQR---QTLSRPPTP 297
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +3 Query: 45 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 164 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -1 Query: 188 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 66 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>RMT2_ASHGO (Q759W1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 413 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +1 Query: 241 LPTNLPFI----TTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 363 L T L +I T N+ V DW D + V A IVKN +E Sbjct: 200 LQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAASIVKNREPAE 244
>ATPG_GEOKA (Q5KUJ2) ATP synthase gamma chain (EC 3.6.3.14) (ATP synthase F1| sector gamma subunit) Length = 285 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -3 Query: 351 VVLDDDGARHPQLVHRPVEGDGELVL 274 V L GA HP LV RPV+ G LV+ Sbjct: 56 VALGAGGASHPMLVSRPVKKTGYLVI 81
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 116 APEAPRQVAHDAADAKHLRSISGECG 39 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>CEA9_ECOLI (P09883) Colicin-E9 (EC 3.1.-.-)| Length = 582 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 6/66 (9%) Frame = +3 Query: 72 GVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGEPGAMA---- 239 G GG+ ++ A + G + ++K L F FG + + + + +P M+ Sbjct: 99 GAGGLAVSISASELSAAIAGIIAKLKKVNLKFTPFGVVLSSLIPSEIAKDDPNMMSKIVT 158 Query: 240 --PADE 251 PAD+ Sbjct: 159 SLPADD 164
>BLI3_NEUCR (Q01358) Protein bli-3| Length = 209 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 5/27 (18%) Frame = -1 Query: 209 ELGDAVHDGGAE-----VVEVERVLAH 144 +LGD VHDGG E V+ V+ V AH Sbjct: 138 DLGDGVHDGGPEDPRVGVIRVKMVTAH 164
>RS2_BURPS (Q63T12) 30S ribosomal protein S2| Length = 246 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 241 LPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 363 +P + + G +K AVT +KLGVP +V NH+ E Sbjct: 156 IPDAIFVVDVGYHKIAVT---EANKLGVPVIAVVDTNHSPE 193
>RS2_BURMA (Q62JC4) 30S ribosomal protein S2| Length = 246 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 241 LPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 363 +P + + G +K AVT +KLGVP +V NH+ E Sbjct: 156 IPDAIFVVDVGYHKIAVT---EANKLGVPVIAVVDTNHSPE 193
>RS2_AZOSE (Q5NZH5) 30S ribosomal protein S2| Length = 251 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 241 LPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 363 LP + I G +K A+T KLG+P +V NH+ E Sbjct: 156 LPDAMFVIDVGYHKIAIT---EAQKLGIPIVAVVDTNHSPE 193
>SYH_BURMA (Q62JW5) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 446 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +1 Query: 226 LEQWLLPTNLPF-----ITTGENKFAVT-FDWSVDKLGVPGAI 336 L+Q L NLPF + G + + +T F+W DKLG G + Sbjct: 246 LQQLLKANNLPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTV 288
>GATE_ARCFU (O28832) Glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.-)| (Glu-ADT subunit E) Length = 613 Score = 28.1 bits (61), Expect = 5.5 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = -1 Query: 227 RFAAAEELGDAVHDGGAEVVEVERVLAHEDDGALE--VGAPEAPRQVAHDAADAKHLRSI 54 R A E GDAV + V VER L + A VG PE R+ A++ +LR + Sbjct: 357 RDAVGAEDGDAVVMAAGDAVRVERALRRIIERAKHCLVGVPEETRK-ANEDGTTSYLRPL 415 Query: 53 SG 48 G Sbjct: 416 PG 417
>TLP_PRUAV (P50694) Thaumatin-like protein precursor| Length = 245 Score = 27.7 bits (60), Expect = 7.1 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 10/53 (18%) Frame = -1 Query: 338 MMAPGT------PSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAAAE 210 M+ PGT P LST S+ + L +PV NGRF R+ CS A+ + Sbjct: 35 MVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGK 87
>FABH_ANASP (Q8Z062) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)| (3-oxoacyl-[acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III) (KAS III) Length = 330 Score = 27.7 bits (60), Expect = 7.1 Identities = 17/69 (24%), Positives = 31/69 (44%) Frame = -1 Query: 347 FLTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFAAAEELGDAVHDGGAEVV 168 +L + GT K+T + PV MNG+ V R + E + A+ + V Sbjct: 190 YLNLAYQGTAKEILPNVKITQGTYQPVTMNGKEVYRFAAQK--VPEIIDKALFEAQLTVD 247 Query: 167 EVERVLAHE 141 +++ +L H+ Sbjct: 248 QIDWLLLHQ 256
>PRTR_PSEAE (Q06553) HTH-type transcriptional regulator prtR (Pyocin repressor| protein) Length = 256 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = -1 Query: 347 FLTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFAAAEELGDAVHDGGAEVV 168 + T+ A G + +++T N P++M+G +G + E+ HDG V Sbjct: 140 YATLRASGVDPSAAICAQLTGNSMEPLIMDGSTIGVDTATTHITDGEIYALEHDGMLRVK 199 Query: 167 EVERV 153 V R+ Sbjct: 200 FVYRL 204
>Y840_NEIMB (Q9JZZ2) UPF0307 protein NMB0840| Length = 168 Score = 27.3 bits (59), Expect = 9.3 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Frame = -1 Query: 308 TDQSKVTANLFSPVVMNGRFVGR-------SHCSRFAAAEELGDAVHDGGAEVVEVERVL 150 T K+T+N + +F+GR + F A DA H+ + VE RV Sbjct: 50 TAYKKITSN--GALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVEQARVR 107 Query: 149 AHEDDGALEVGAPEAPRQVAHDAADAKHLRSI 54 DDGAL + P ADA LR++ Sbjct: 108 LLADDGALTQFMSDFPH------ADAGKLRTL 133
>TSYL1_MOUSE (O88852) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 379 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -1 Query: 221 AAAEELGDAVHDGGAEVVEVERVLAHEDDGALEV--GAPEAPRQ 96 AAA E + G EV+EVE+ A E+ LE G EAP + Sbjct: 116 AAAAEKSEVATPGSEEVMEVEQKPAGEEMEMLEASGGVREAPEE 159
>TP1A_MALDO (Q9FSG7) Thaumatin-like protein 1a precursor (Allergen Mal d 2)| (Mdtl1) (Pathogenesis-related protein 5a) (PR-5a) Length = 246 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -1 Query: 299 SKVTANLFSPVVMNGRFVGRSHCSRFAAAEELGDAVHDGGAEV 171 SK + ++ +P +GRF GR+ CS AA + + G +V Sbjct: 59 SKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQV 101
>RPOA_VIBCH (Q9KP08) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 330 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 Query: 203 GDAVHDGGAEVVEVERVLAH 144 GD HDG E+V E V+ H Sbjct: 114 GDITHDGDVEIVNPEHVICH 133
>PRP45_EMENI (Q5AU50) Pre-mRNA-splicing factor prp45 (Pre-mRNA-processing| protein 45) Length = 583 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 51 RDRAKMFGVGGIVSDLTGGLRGAHLK 128 +D A FG+ +++D+TGG GA K Sbjct: 535 KDTADPFGIDSMIADVTGGAGGAGQK 560
>TLP2_PRUPE (P83335) Thaumatin-like protein 2 precursor (PpAZ8)| Length = 242 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = -1 Query: 326 GTPSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAAAE 210 G P LST S+ + L +PV +GRF R+ CS A+ + Sbjct: 42 GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGK 84
>CPKA_PYRKO (Q5JHG5) Carbamate kinase (EC 2.7.2.2) (Carbamate kinase-like| carbamoylphosphate synthetase) Length = 315 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Frame = -1 Query: 215 AEELGDAVHDGGAEVV-------EVERVLAHEDDGALEVGAPEAPRQVA 90 A+++ D + DG EVV +V +L H D G G P P VA Sbjct: 33 AKQIADIILDGDYEVVITHGNGPQVGALLLHMDAGQQVYGIPAQPMDVA 81
>BHLH3_MOUSE (Q99PV5) Class B basic helix-loop-helix protein 3 (bHLHB3)| (Differentially expressed in chondrocytes protein 2) (mDEC2) Length = 410 Score = 27.3 bits (59), Expect = 9.3 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = -1 Query: 359 EAWLFLTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFAAA 213 E+W T P L + V L +P V +GR GR+ CS AAA Sbjct: 150 ESW---TPREPRCAQLVSHLHAVATQLLTPQVPSGRGSGRAPCSAGAAA 195 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,434,956 Number of Sequences: 219361 Number of extensions: 657384 Number of successful extensions: 3033 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 2914 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3025 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
