ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56h07 |
|---|---|
| Clone Library Name | barley_pub |
>NELFA_DROME (Q86NP2) Negative elongation factor A homolog| Length = 1248 Score = 33.5 bits (75), Expect = 0.12 Identities = 21/74 (28%), Positives = 33/74 (44%) Frame = +1 Query: 190 THRGRRTQSVRPSAEALHPHPEQPAPCLINLLSSSLVLTYKPCPRAAAAALHPSVTADAS 369 T G +TQS +P + P+Q P L+ S+ ++L P + A A PS + A+ Sbjct: 575 TSSGSQTQSQQPQTLQVQQAPQQSHPPLLINSSTPVILASSPSAQRAKALALPSSSTSAT 634 Query: 370 IPTRPPXTRWQPSP 411 T P + P Sbjct: 635 TTTTIPSQAIKTMP 648
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 33.1 bits (74), Expect = 0.16 Identities = 22/72 (30%), Positives = 28/72 (38%) Frame = +1 Query: 193 HRGRRTQSVRPSAEALHPHPEQPAPCLINLLSSSLVLTYKPCPRAAAAALHPSVTADASI 372 HR +P+++AL P P P P S L P PR AL T + Sbjct: 282 HREEPDLQPQPASDALRPRPALPPP-------SKSALLPPPSPRVGKRALPGPSTQPPAT 334 Query: 373 PTRPPXTRWQPS 408 PT P +PS Sbjct: 335 PTSPHRRAQEPS 346
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 31.6 bits (70), Expect = 0.47 Identities = 20/63 (31%), Positives = 26/63 (41%) Frame = +1 Query: 220 RPSAEALHPHPEQPAPCLINLLSSSLVLTYKPCPRAAAAALHPSVTADASIPTRPPXTRW 399 +P+++AL P P P P S L P PR AL S + PT P Sbjct: 291 QPASDALRPRPALPPP-------SKSALLPPPSPRVGKRALPGSSAQPPATPTSPHRCTQ 343 Query: 400 QPS 408 +PS Sbjct: 344 EPS 346
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 Query: 305 PTNRALEPPPPRCTLASPPTPQSPHARRSRAGS 403 P +R PPPP T A PP P P R S Sbjct: 353 PPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDS 385
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 30.8 bits (68), Expect = 0.80 Identities = 14/33 (42%), Positives = 15/33 (45%) Frame = +2 Query: 305 PTNRALEPPPPRCTLASPPTPQSPHARRSRAGS 403 P +R PPPP T A PP P P R S Sbjct: 353 PPSRGKPPPPPSRTPAGPPPPPPPPLRNGHRDS 385
>MRIP_MOUSE (P97434) Myosin phosphatase Rho-interacting protein| (Rho-interacting protein 3) (p116Rip) (RIP3) Length = 1024 Score = 30.8 bits (68), Expect = 0.80 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 314 RALEPPPPRCTLASPPTPQSPHARRSR 394 RA E PP L SPP+P +PH+RRS+ Sbjct: 279 RAEEQLPP---LLSPPSPSTPHSRRSQ 302
>MRIP_RAT (Q9ERE6) Myosin phosphatase Rho-interacting protein| (Rho-interacting protein 3) (p116Rip) (RIP3) Length = 1029 Score = 30.8 bits (68), Expect = 0.80 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 314 RALEPPPPRCTLASPPTPQSPHARRSR 394 RA E PP L SPP+P +PH+RRS+ Sbjct: 284 RAEEQLPP---LLSPPSPSTPHSRRSQ 307
>LIPM_NEIMA (P57037) Capsule polysaccharide modification protein lipA| Length = 704 Score = 30.8 bits (68), Expect = 0.80 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +3 Query: 12 PPY-------GIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPIXXXXXXXXXXX 170 PPY GI+ T PS++ L +A +PS+ L Q+R++ DF I Sbjct: 98 PPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQARQA-MDF-ILQHHLSKYNHA 155 Query: 171 PQISRRDPSRTP 206 P++S P R+P Sbjct: 156 PELSDDHPLRSP 167
>RAPH1_HUMAN (Q70E73) Ras-associated and pleckstrin homology domains-containing| protein 1 (RAPH1) (Lamellipodin) (Proline-rich EVH1 ligand 2) (PREL-2) (Protein RMO1) (Amyotrophic lateral sclerosis 2 chromosomal region candidate 9 gene protein) Length = 1302 Score = 30.4 bits (67), Expect = 1.0 Identities = 36/144 (25%), Positives = 50/144 (34%), Gaps = 14/144 (9%) Frame = +1 Query: 4 PTPPPTEFTNPQKFRAR*ILSKNRRPESLPKSFPNPANPRQIXXXXXXXXXXXXXFRRFH 183 P PPPT P K + K S P P P++ +R Sbjct: 992 PPPPPTASPTPDKSGSP---GKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPS 1048 Query: 184 GETHRGRRT---QSVRPSAEALHPHPEQPAPCLINLLSSSLV-LTYKPCPRAAAAAL--- 342 ++ + T +S PS E L P P P +NL +L + + C A A L Sbjct: 1049 VDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCVSAKAPVLSGR 1108 Query: 343 -------HPSVTADASIPTRPPXT 393 PS +D+ P PP T Sbjct: 1109 GKDSVVEFPSPPSDSDFPPPPPET 1132 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 326 PPPPRCTLASPPTPQSP 376 PPPP +L PP P SP Sbjct: 970 PPPPESSLVFPPPPPSP 986
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 10/77 (12%) Frame = +1 Query: 208 TQSVRPSAEALHPHP--EQPAPCLINLLSSSLVLTYKPCPRAAAAALHPSV--------T 357 T+ +P+AE LH P E+P PCL L S+ + + P AA P+ + Sbjct: 437 TRLGQPAAEQLHAGPATEEPGPCLSQQLHSA---SAEDTPVVQLAAETPTAESKERALNS 493 Query: 358 ADASIPTRPPXTRWQPS 408 A S+PT P + P+ Sbjct: 494 ASTSLPTSCPGSEPVPT 510
>LIPM_NEIMB (Q05013) Capsule polysaccharide modification protein lipA| Length = 704 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +3 Query: 12 PPY-------GIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPPDFPIXXXXXXXXXXX 170 PPY GI+ T PS++ L +A +PS+ L Q++++ DF I Sbjct: 98 PPYSIVYDDIGIYYDTTRPSRLEQLILAADTMPSETLAQAQQA-MDF-ILQHHLSKYNHA 155 Query: 171 PQISRRDPSRTP 206 P++S P R+P Sbjct: 156 PELSDDHPLRSP 167
>BIB_DROME (P23645) Neurogenic protein big brain| Length = 696 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = +2 Query: 305 PTNRALEPPPPRCTLASPPTPQSPHARRSRAGSHR 409 P+ PPPP A PP P + H + R S R Sbjct: 596 PSVEPSPPPPPMLMYAPPPQPNAAHPQPIRTQSER 630
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = +1 Query: 199 GRRTQSVRPSAEALHPHPEQPAPCLINLLSSSLVLTYKPCPRAAAAALHPSVTADASIPT 378 G +S+ PS ++LH P LL + + ++ PRA++ HP P+ Sbjct: 858 GTSMESLAPSIDSLHGCP---------LLPPQVCIGHRDAPRASSPPRHPPSDIGLLAPS 908 Query: 379 RPP 387 PP Sbjct: 909 PPP 911
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +3 Query: 39 KIPSKINPLQKSAPRIPSQELPQSRESPP 125 +IPS I +K PR PSQ+ S+ESPP Sbjct: 1294 EIPSHIPSDEKDLPREPSQKDTISQESPP 1322
>EDN1_MOUSE (P22387) Endothelin-1 precursor (ET-1) (Preproendothelin-1) (PPET1)| Length = 202 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +1 Query: 280 LLSSSLVLTYKPCPRAAAAALHPSVTADASIPTRPPXTRWQP 405 ++ S L +T++ P A S A+ + + PP T W+P Sbjct: 6 VIFSLLFVTFQGAPETAVLGAELSTGAENGVQSPPPSTPWRP 47
>AMYB_MEDSA (O22585) Beta-amylase (EC 3.2.1.2) (1,4-alpha-D-glucan| maltohydrolase) Length = 496 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 33 PTKIPSKINPLQKSAPRIPSQELPQSRESPPDFP 134 P K I PL++S P+IP L ++ + P FP Sbjct: 452 PEKYNHGIPPLKRSGPKIPDDVLNEATKPIPPFP 485
>AL2S4_MOUSE (Q3V0J1) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 4 protein homolog Length = 427 Score = 28.9 bits (63), Expect = 3.0 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +1 Query: 181 HGETHRGRRTQSVRPSAEALHPHPEQPAP 267 H E RR + P A L HPE PAP Sbjct: 76 HAEPVVNRRAEGSEPPAAELKEHPEAPAP 104
>FOXGB_RAT (Q00939) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) Length = 480 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 Query: 326 PPPPRCTLASPPTPQSPHARRSRA 397 PPPP+ PP PQ P AR + A Sbjct: 66 PPPPQQQQQPPPAPQPPQARGAPA 89
>PURL_BACSK (Q5WJ86) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 741 Score = 28.9 bits (63), Expect = 3.0 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +3 Query: 27 HKPTKIPSKINPLQKSAPRIPSQELPQSRES 119 HKP+K+P+ + Q+ AP IP E+ ++ E+ Sbjct: 382 HKPSKVPAYFDAFQQQAPYIP--EITEANET 410
>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1748 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Frame = +1 Query: 238 LHPHPE------QPAPCLINLLSSSLVLTYKPCPRAAAAALHPSVTADASIPTRPPXTRW 399 LH HPE + P L++ SS L + P + + A P A P RPP T Sbjct: 536 LHLHPESFTLGWKRRPLLLDSHSSFLPSSCLQPPASPSIAAAPHPLPPAQKPPRPPTTVP 595 Query: 400 QPSP 411 P P Sbjct: 596 TPKP 599
>Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)| Length = 875 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = +3 Query: 15 PYGIHKPTKIPSKI--NPLQKSAPRIPSQELPQSRESPPDFP 134 PYG + P + P P Q P+ P Q+ PQ + PP P Sbjct: 94 PYGQYWPQQPPQPPPDQPQQPQPPQQPPQQPPQQQPQPPQPP 135
>IGHA1_GORGO (P20758) Ig alpha-1 chain C region| Length = 353 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Frame = +1 Query: 250 PEQPAPCLINLLSSSLVLTYKPCPRAAAAALH----PSVTADASIPTRPPXTRWQPSP 411 P Q A + SS L L CP + H + + D ++P R P T PSP Sbjct: 55 PSQDASGDLYTTSSQLTLPATQCPDGKSVTCHVNHYTNPSQDVTVPCRVPSTPPTPSP 112
>PUNC_MOUSE (Q8BQC3) Putative neuronal cell adhesion molecule precursor| Length = 813 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +1 Query: 190 THRGRRTQSVRPSAEALHPHPEQPAPCLINLL-SSSLVLTYKPCPRAA 330 T RG SV A L P P P + LL SSSL L +KP PR A Sbjct: 514 TPRGASLASVPTLASTLGEAPVPP-PLSVRLLGSSSLQLLWKPWPRLA 560
>NUMB_HUMAN (P49757) Protein numb homolog (h-Numb) (Protein S171)| Length = 651 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Frame = +1 Query: 175 RFHGETHRGRRTQSVRPSAEALHPHPEQPAPCLINLLSS----SLVLTYKPCPRAAAAAL 342 R+ E + R Q + SA L P + P P I+ +S + LT +P P AL Sbjct: 442 RWLEEVSKSVRAQQPQASAAPLQPVLQPPPPTAISQPASPFQGNAFLTSQPVPVGVVPAL 501 Query: 343 HPSVTADASIP 375 P+ S P Sbjct: 502 QPAFVPAQSYP 512
>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)| Length = 471 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +2 Query: 305 PTNRALEPPPPRCTLASPPTPQSPHA 382 PT PP P T +PPTP P A Sbjct: 355 PTKSGANPPKPSPTPPTPPTPPPPSA 380
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.5 bits (62), Expect = 4.0 Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 4/74 (5%) Frame = +1 Query: 199 GRRTQSVRPSAEALHPHPEQP----APCLINLLSSSLVLTYKPCPRAAAAALHPSVTADA 366 G R + RPSA P +QP AP KP PR A AA P TA Sbjct: 91 GDRAAAPRPSAAPKAPAAQQPAAPSAPAPAPSQGPRPTPGPKPAPRPAPAA--PEFTAPP 148 Query: 367 SIPTRPPXTRWQPS 408 + P P PS Sbjct: 149 AAPAAPSTPAPAPS 162
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 305 PTNRALEPPPPRCTLASPPTPQSPHAR 385 P + + PPP SP +P SPHAR Sbjct: 1384 PPSPRYDAPPPTLHHHSPHSPHSPHAR 1410
>YAP7_YEAST (Q08182) AP-1-like transcription factor YAP7| Length = 245 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 57 NPLQKSAPRIPSQELPQSRESPPDFPI 137 N LQK+ P I + Q E+PPD PI Sbjct: 193 NELQKALPLIVNTPFQQQPENPPDNPI 219
>VGLB_BHV1P (P17471) Glycoprotein I precursor (Glycoprotein GVP-6)| (Glycoprotein 11A) (Glycoprotein 16) (Glycoprotein G130) Length = 928 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 325 AAAAALHPSVTADASIPTRPPXTRW 399 A AA L+PS A A++ RPP W Sbjct: 573 AEAAKLNPSAAASAALDRRPPRACW 597
>HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)| Length = 356 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +2 Query: 317 ALEPPPPRCTLASPPTPQSPHARRSRA 397 AL PPPP A+PP P+ P + ++ Sbjct: 77 ALPPPPPPPLPAAPPAPEFPWMKEKKS 103
>CDN1C_HUMAN (P49918) Cyclin-dependent kinase inhibitor 1C (Cyclin-dependent| kinase inhibitor p57) (p57KIP2) Length = 316 Score = 24.3 bits (51), Expect(2) = 5.4 Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Frame = +1 Query: 214 SVRPSAEALHPHPEQ-PAPCLINLLS--SSLVLTYKPCPRAAAAALHPSVTADASIPTRP 384 S P L P P PAP + + + VL P P A A V A A P Sbjct: 146 STPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPA 205 Query: 385 PXTRWQPSP 411 P P+P Sbjct: 206 PAPAPAPAP 214 Score = 22.3 bits (46), Expect(2) = 5.4 Identities = 7/28 (25%), Positives = 17/28 (60%) Frame = +3 Query: 54 INPLQKSAPRIPSQELPQSRESPPDFPI 137 ++ L+++ ++PS +P +PP P+ Sbjct: 126 LDGLEEAPEQLPSVPVPAPASTPPPVPV 153
>PUNC_HUMAN (Q8IVU1) Putative neuronal cell adhesion molecule precursor| Length = 814 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = +1 Query: 190 THRGRRTQSVRPSAEALHPHPEQPAPCLINLLSSSLVLTYKPCPRAA 330 T RG + SV A L P P + L SSSL L ++P PR A Sbjct: 502 TPRGASSASVPTLASTLGEAPAPPPLSVRVLGSSSLQLLWEPWPRLA 548
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 9/36 (25%) Frame = +2 Query: 305 PTNRALEPPP-PRCTLASPP--------TPQSPHAR 385 P+ AL PPP PR SPP TP SPH R Sbjct: 303 PSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRR 338
>RGDSR_HUMAN (Q8IZJ4) Ral-GDS-related protein (hRGR)| Length = 473 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +3 Query: 12 PPYGIHKPTKIPSKINPLQKSAPRIPSQELPQSRESPP 125 PP + +P P P + S PS+ELP PP Sbjct: 183 PPGTVLEPQSAPESSCPCRGSVKNQPSEELPDMTTFPP 220
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +3 Query: 15 PYGIHKPT-KIPSKINPLQKSAPRIPSQELPQSR 113 P G+ +P+ +P+K +PL A +PS+ PQ++ Sbjct: 557 PQGLGQPSGPLPAKASPLSTKASPLPSKASPQAK 590
>ATC4_SCHPO (O14072) Cation-transporting ATPase 4 (EC 3.6.3.-)| Length = 1211 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +2 Query: 311 NRALEPPPPRCTLASPPTPQSPHARRSRAGSHR 409 N P PP A PP P +PH +++ G ++ Sbjct: 876 NLPTPPVPPALCHAFPPGPNNPHREKTQEGLNK 908
>NAT6_HUMAN (Q93015) N-acetyltransferase 6 (EC 2.3.1.-) (Fus-2 protein) (Fusion| 2 protein) Length = 286 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Frame = +2 Query: 305 PTNRALEPPPP--RCTLASPPTPQSPHAR 385 P L PPPP C SPP P P ++ Sbjct: 236 PKGPPLPPPPPLPECLTISPPVPSGPPSK 264
>DEAF1_PANTR (O77562) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) Length = 565 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%) Frame = +1 Query: 184 GETHRGRRTQ--SVRPSAEALHPHPEQPA---PCLINLLSSSLVLTYKPCPRAAAAALHP 348 G+ G Q SV+P A HP P P C I P P AA HP Sbjct: 368 GDVFAGATVQEASVQPPCRASHPEPHYPGYQDSCQI-----------APFPEAALPTSHP 416 Query: 349 SVTADASIPTR--PPXTRWQPSP 411 + S+P PP T + +P Sbjct: 417 KIVL-TSLPALAVPPPTPTKAAP 438
>DEAF1_HUMAN (O75398) Deformed epidermal autoregulatory factor 1 homolog| (Nuclear DEAF-1-related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain-containing protein 5) Length = 565 Score = 27.7 bits (60), Expect = 6.8 Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 7/83 (8%) Frame = +1 Query: 184 GETHRGRRTQ--SVRPSAEALHPHPEQPA---PCLINLLSSSLVLTYKPCPRAAAAALHP 348 G+ G Q SV+P A HP P P C I P P AA HP Sbjct: 368 GDVFAGATVQEASVQPPCRASHPEPHYPGYQDSCQI-----------APFPEAALPTSHP 416 Query: 349 SVTADASIPTR--PPXTRWQPSP 411 + S+P PP T + +P Sbjct: 417 KIVL-TSLPALAVPPPTPTKAAP 438
>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)| (Ubiquitin thioesterase 51) (Ubiquitin-specific-processing protease 51) (Deubiquitinating enzyme 51) Length = 711 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Frame = +2 Query: 326 PPPPRCTLASPPTPQSPHARRSRA--GSHR 409 PPPP PP P P A R RA GS R Sbjct: 123 PPPPPARPPPPPPPPPPPAPRPRAWRGSRR 152
>CN004_HUMAN (Q9H1B7) Protein C14orf4| Length = 796 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Frame = +2 Query: 305 PTNRALEPPPPRCTLAS--PPTPQSPHA 382 P + A+ PPPP L S PPTP P A Sbjct: 265 PASAAVLPPPPPHALGSRGPPTPAPPGA 292
>NRP1_XENLA (P28824) Neuropilin-1 precursor (A5 protein) (A5 antigen)| Length = 928 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -2 Query: 137 DW-EIWRGFAGLGKLLGRDSGRRFLERIYLARNFCGFVNSV 18 DW IW GF G+G +GR G+ R+ R+F G ++ + Sbjct: 209 DWLGIWDGFPGVGPHIGRYCGQNTPGRV---RSFTGILSMI 246
>EPHAA_HUMAN (Q5JZY3) Ephrin type-A receptor 10 precursor (EC 2.7.10.1)| Length = 1008 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 Query: 323 EPPPPRCTLASPPTPQSPHARRS 391 +P PP+C L + P P +P A R+ Sbjct: 906 DPEPPKCALTTCPRPPTPLADRA 928
>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)| Length = 1201 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 12/67 (17%) Frame = +1 Query: 223 PSAEALHPHPEQPAPCLINLLS---------SSLVLTYKPCP---RAAAAALHPSVTADA 366 P +E L P+P P P L ++ L ++ PCP A++A+ PS+++ Sbjct: 828 PLSEGLQPYPAFPFPYLDTFMTVFLPDPPVCPLLSPSFLPCPFLGATASSAISPSMSSAM 887 Query: 367 SIPTRPP 387 S PP Sbjct: 888 SPTLDPP 894
>ROBO3_MOUSE (Q9Z2I4) Roundabout homolog 3 precursor (Retinoblastoma-inhibiting| gene 1) (Rig-1) Length = 1366 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 Query: 317 ALEPPPPRCTLASPPTPQ 370 AL PPPP C L+ P P+ Sbjct: 1084 ALPPPPPSCELSCPEGPE 1101
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 10 PPPTEFTNPQKFRAR*ILSKNRRPESLPKSFPNPANP 120 PPP EF+ P + +L+ +R + S P PA P Sbjct: 269 PPPAEFSYPADNQRGSVLAGPKRTSMVSPSHPPPAPP 305
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +3 Query: 6 HTPPYGIHKPTKIPSKINPLQKSAPR-IPSQELPQSRESPPDFP 134 HTPP + + PS L S+P P Q+ Q ++ PP++P Sbjct: 205 HTPPKSVSPQSSQPSSSPTLLISSPHATPPQQ--QQQQPPPNYP 246
>KLCB2_ECOLI (P52605) Protein klcB| Length = 461 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 5/92 (5%) Frame = +1 Query: 7 TPPPTEFTNPQKFRAR*ILSKNRRPESLPKSFP-----NPANPRQIXXXXXXXXXXXXXF 171 TPPP R R ++ R+P+ LP F PA+ I Sbjct: 296 TPPPR--------RVRAVVEDWRKPDELPPGFAWVDAVLPAHQAFIARKWAASAKAKLAA 347 Query: 172 RRFHGETHRGRRTQSVRPSAEALHPHPEQPAP 267 R + G+R + V P+ P ++ AP Sbjct: 348 ARAKAQEPAGQRREPVTPAKPEPEPAKDEDAP 379
>EDN1_RAT (P22388) Endothelin-1 precursor (ET-1) (Preproendothelin-1) (PPET1)| Length = 202 Score = 27.3 bits (59), Expect = 8.8 Identities = 11/42 (26%), Positives = 20/42 (47%) Frame = +1 Query: 280 LLSSSLVLTYKPCPRAAAAALHPSVTADASIPTRPPXTRWQP 405 ++ S L + ++ P A S A+ + + PP T W+P Sbjct: 6 VIFSLLFVAFQGAPETAVLGAELSPRAEKEVQSPPPSTSWRP 47
>AMYB_DROME (P81641) Alpha-amylase B precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 494 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 Query: 93 GKGFGAPIFGEDLSCSEFLWVCEFR 19 G +PIF D SCS WVCE R Sbjct: 362 GHNIASPIFNSDNSCSGG-WVCEHR 385
>AMYA_DROME (P08144) Alpha-amylase A precursor (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) Length = 494 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -1 Query: 93 GKGFGAPIFGEDLSCSEFLWVCEFR 19 G +PIF D SCS WVCE R Sbjct: 362 GHNIASPIFNSDNSCSGG-WVCEHR 385
>RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)| Length = 567 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 Query: 317 ALEPPPPRCTLASPPTPQSPHAR 385 ALEPP P AS P P +P A+ Sbjct: 62 ALEPPAPAGASASTPPPPAPEAQ 84
>CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7.12.1)| (CDC-like kinase 1) Length = 484 Score = 27.3 bits (59), Expect = 8.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 Query: 172 RRFHGETHRGRRTQSVRPSAE 234 RR HG++HR +RT+SV E Sbjct: 126 RRSHGKSHRRKRTRSVEDDEE 146
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/24 (50%), Positives = 12/24 (50%) Frame = +2 Query: 326 PPPPRCTLASPPTPQSPHARRSRA 397 PPPP T A PP P P S A Sbjct: 73 PPPPPATAAPPPPPPPPPPPASAA 96
>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1| Length = 2042 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = +3 Query: 33 PTKIPSKINPLQKSAP-RIPSQELPQSRESPPDFPI 137 P + P PLQ P + P PQSR SPP P+ Sbjct: 1033 PPEPPEASAPLQNPLPSQSPKHPAPQSRLSPPPPPL 1068
>GLND_STRCO (O69873) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII| uridylyl-transferase) (Uridylyl-removing enzyme) (UTase) Length = 835 Score = 27.3 bits (59), Expect = 8.8 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +2 Query: 305 PTNRALEPPPPRCTLA 352 P R +EPPPPR T+A Sbjct: 741 PRRRGVEPPPPRVTVA 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,980,143 Number of Sequences: 219361 Number of extensions: 956403 Number of successful extensions: 5982 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 4395 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5788 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
