ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl56h06 |
|---|---|
| Clone Library Name | barley_pub |
>RIR1_ARATH (Q9SJ20) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase R1 subunit) (AtRNR1) Length = 816 Score = 219 bits (558), Expect = 3e-57 Identities = 108/139 (77%), Positives = 120/139 (86%) Frame = +1 Query: 67 ALTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIM 246 A+T +HPDYASLAARIAVSNLHKNTKKSFSETIKDM+ H N+RSGL SPLIA+D++E+IM Sbjct: 66 AMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDVFEIIM 125 Query: 247 KNAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDS 426 +NAARLDSEII KTLERSYLLK+ G VVERPQHMLMRV+VGIHKDDIDS Sbjct: 126 QNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHKDDIDS 185 Query: 427 AIRTYHLMSQRWFTHASPT 483 I+TYHLMSQRWFTHASPT Sbjct: 186 VIQTYHLMSQRWFTHASPT 204
>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 171 bits (432), Expect = 1e-42 Identities = 83/138 (60%), Positives = 103/138 (74%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 LT HPDYA LAARIAVSNLHK TKK FS+ ++D+Y + N +G SP++A+ ++++ Sbjct: 67 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLA 126 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 N RL+S II KTLERSYLLK+ G V ERPQHMLMRVSVGIHK+DID+A Sbjct: 127 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 186 Query: 430 IRTYHLMSQRWFTHASPT 483 I TY+L+S+RWFTHASPT Sbjct: 187 IETYNLLSERWFTHASPT 204
>RIR1_MOUSE (P07742) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 792 Score = 168 bits (426), Expect = 6e-42 Identities = 82/138 (59%), Positives = 101/138 (73%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 LT HPDYA LAARIAVSNLHK TKK FS+ ++D+Y + N +G SP++A +++M Sbjct: 67 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASSTLDIVMA 126 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 N RL+S II KTLERSYLLK+ G V ERPQHMLMRVSVGIHK+DID+A Sbjct: 127 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 186 Query: 430 IRTYHLMSQRWFTHASPT 483 I TY+L+S++WFTHA PT Sbjct: 187 IETYNLLSEKWFTHAPPT 204
>RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) Length = 812 Score = 166 bits (421), Expect = 2e-41 Identities = 81/138 (58%), Positives = 102/138 (73%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 LT +HPDYA LAARIAVSNLHK TKK+FS+ +D+Y H N+ + PL++E Y V+ K Sbjct: 78 LTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFHYNVVKK 137 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 NA RL+S II KTLERSYLLK G + ERPQHMLMRV++GIH +DID+A Sbjct: 138 NATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAA 197 Query: 430 IRTYHLMSQRWFTHASPT 483 + TY+L+S+R+FTHASPT Sbjct: 198 VETYNLLSERYFTHASPT 215
>RIR1_BRARE (P79732) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase M1 subunit) (Ribonucleotide reductase large chain) (Ribonucleotide reductase protein R1 class I) Length = 794 Score = 163 bits (412), Expect = 3e-40 Identities = 80/137 (58%), Positives = 101/137 (73%) Frame = +1 Query: 73 TASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKN 252 T HPDYA LAARIAVSNLHK TKK FSE ++D+Y + N + SP+I+++ ++++ N Sbjct: 68 TTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKETLDIVLAN 127 Query: 253 AARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSAI 432 RL+S II KTLERSYLLK+ G V ERPQHMLMRVSVGIHK+DI +AI Sbjct: 128 KDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIAAAI 187 Query: 433 RTYHLMSQRWFTHASPT 483 TY+L+S++WFTHASPT Sbjct: 188 ETYNLLSEKWFTHASPT 204
>RIR1_VARV (P32984) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 158 bits (399), Expect = 8e-39 Identities = 79/137 (57%), Positives = 100/137 (72%) Frame = +1 Query: 73 TASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKN 252 T HPDYA LAARIAVSNLHK TKK FSE +KD++ + N ++G SP+I+ +V+ K Sbjct: 68 TTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSITMDVVNKY 127 Query: 253 AARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSAI 432 +L+S II KTLE+SYLLK+ +VERPQHMLMRV+VGIH+ DIDSAI Sbjct: 128 KDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQWDIDSAI 187 Query: 433 RTYHLMSQRWFTHASPT 483 TY+L+S++WFTHASPT Sbjct: 188 ETYNLLSEKWFTHASPT 204
>RIR1_SCHPO (P36602) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 811 Score = 157 bits (397), Expect = 1e-38 Identities = 76/138 (55%), Positives = 102/138 (73%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 +T HPDYA LAARIAVSNLHK T+K FS ++ ++ + N ++ +P+I++ IY+++MK Sbjct: 67 MTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKIYDIVMK 126 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 + LDS II KTLERSYLL++ G V ERPQHM+MRV+VGIH +DI++A Sbjct: 127 HKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHGEDIEAA 186 Query: 430 IRTYHLMSQRWFTHASPT 483 I TY+LMSQR+FTHASPT Sbjct: 187 IETYNLMSQRYFTHASPT 204
>RIR1_YEAST (P21524) Ribonucleoside-diphosphate reductase large chain 1 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 1) (Ribonucleotide reductase R1 subunit 1) Length = 888 Score = 157 bits (396), Expect = 2e-38 Identities = 71/138 (51%), Positives = 103/138 (74%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 +T HPDYA+LAARIA+SNLHK T K FS+ ++D+Y + N +G +P+I++D+Y ++M+ Sbjct: 67 MTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDVYNIVME 126 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 N +L+S I+ KTLERSYLL++ G V ERPQH++MRV++GIH DI++A Sbjct: 127 NKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHGRDIEAA 186 Query: 430 IRTYHLMSQRWFTHASPT 483 + TY+LMS ++FTHASPT Sbjct: 187 LETYNLMSLKYFTHASPT 204
>RIR1_VACCV (P12848) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 156 bits (394), Expect = 3e-38 Identities = 77/137 (56%), Positives = 100/137 (72%) Frame = +1 Query: 73 TASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKN 252 T HPDYA LAARIAVSNLHK TKK FSE ++D++ + N ++G SP+I+ +++ K Sbjct: 68 TTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSITMDIVNKY 127 Query: 253 AARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSAI 432 +L+S II KTLE+SYLLK+ +VERPQHMLMRV+VGIH+ DIDSAI Sbjct: 128 KDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQWDIDSAI 187 Query: 433 RTYHLMSQRWFTHASPT 483 TY+L+S++WFTHASPT Sbjct: 188 ETYNLLSEKWFTHASPT 204
>RIR1_VACCC (P20503) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 156 bits (394), Expect = 3e-38 Identities = 77/137 (56%), Positives = 100/137 (72%) Frame = +1 Query: 73 TASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKN 252 T HPDYA LAARIAVSNLHK TKK FSE ++D++ + N ++G SP+I+ +++ K Sbjct: 68 TTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSITMDIVNKY 127 Query: 253 AARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSAI 432 +L+S II KTLE+SYLLK+ +VERPQHMLMRV+VGIH+ DIDSAI Sbjct: 128 KDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQWDIDSAI 187 Query: 433 RTYHLMSQRWFTHASPT 483 TY+L+S++WFTHASPT Sbjct: 188 ETYNLLSEKWFTHASPT 204
>RIR1_VACCA (Q76RD8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 771 Score = 156 bits (394), Expect = 3e-38 Identities = 77/137 (56%), Positives = 100/137 (72%) Frame = +1 Query: 73 TASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKN 252 T HPDYA LAARIAVSNLHK TKK FSE ++D++ + N ++G SP+I+ +++ K Sbjct: 68 TTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSITMDIVNKY 127 Query: 253 AARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSAI 432 +L+S II KTLE+SYLLK+ +VERPQHMLMRV+VGIH+ DIDSAI Sbjct: 128 KDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQWDIDSAI 187 Query: 433 RTYHLMSQRWFTHASPT 483 TY+L+S++WFTHASPT Sbjct: 188 ETYNLLSEKWFTHASPT 204
>RIR1_NEUCR (Q9UW15) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase large subunit) Length = 929 Score = 155 bits (393), Expect = 4e-38 Identities = 77/138 (55%), Positives = 98/138 (71%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 +T +HPDYA LAARIAVSNLHK TKK +S I ++Y + N R+G SP+IA+D+YE +M+ Sbjct: 67 MTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDVYECVMR 126 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 + DS I+ KTLERSYLLKL G + ERPQHM+MRV+VGI DD++ Sbjct: 127 HKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWGDDVERV 186 Query: 430 IRTYHLMSQRWFTHASPT 483 I TY+LMS + FTHASPT Sbjct: 187 IETYNLMSLKTFTHASPT 204
>RIR3_YEAST (P21672) Ribonucleoside-diphosphate reductase large chain 2 (EC| 1.17.4.1) (Ribonucleotide reductase large subunit 2) (Ribonucleotide reductase DNA damage-inducible regulatory subunit 2) (Ribonucleotide reductase R1 subunit 2) Length = 869 Score = 153 bits (387), Expect = 2e-37 Identities = 73/138 (52%), Positives = 101/138 (73%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 +T HPDYA+LAARIA+SNLHK T K FS+ I+D++ N +G +P+I+++IY ++M+ Sbjct: 67 MTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEIYNIVME 126 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 N L+S I+ KTLERSYLL+L G V ERPQH++MRV++GIH DI+S Sbjct: 127 NKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHGSDIESV 186 Query: 430 IRTYHLMSQRWFTHASPT 483 ++TY+LMS R+FTHASPT Sbjct: 187 LKTYNLMSLRYFTHASPT 204
>RIR1_CAEEL (Q03604) Ribonucleoside-diphosphate reductase large subunit (EC| 1.17.4.1) (Ribonucleotide reductase large chain) Length = 788 Score = 151 bits (382), Expect = 8e-37 Identities = 75/139 (53%), Positives = 100/139 (71%) Frame = +1 Query: 67 ALTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIM 246 ++T HP+YA LAARIAVSNLHK T K FSE +K ++ ++ +G +P+I+++ + +I Sbjct: 72 SMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETWAIIE 131 Query: 247 KNAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDS 426 KNA +L+S I+ KTLERSYLLK+ +VERPQ MLMRVS+GIH DDI S Sbjct: 132 KNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGDDITS 191 Query: 427 AIRTYHLMSQRWFTHASPT 483 AI TY+LMS+R+ THASPT Sbjct: 192 AIETYNLMSERYMTHASPT 210
>RIR1_PLAFG (P50647) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 804 Score = 138 bits (348), Expect = 7e-33 Identities = 66/138 (47%), Positives = 93/138 (67%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 + +HPD++ LAARI NLHKNT +E + +Y Y + G + LI++++Y+ I+ Sbjct: 67 MATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDGRGRPASLISKEVYDFILL 125 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 + RL+ EI KTLERSYLL++ ++ERPQH+LMRVS+GIH DDID A Sbjct: 126 HKVRLNKEIDYTTHFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHIDDIDKA 185 Query: 430 IRTYHLMSQRWFTHASPT 483 + TYHLMSQ++FTHA+PT Sbjct: 186 LETYHLMSQKYFTHATPT 203
>RIR1_PLAF4 (P50648) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 806 Score = 137 bits (344), Expect = 2e-32 Identities = 66/138 (47%), Positives = 93/138 (67%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 + +HPD++ LAARI NLHKNT +E + +Y Y + G + LI++++Y+ I+ Sbjct: 66 MATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDVRGRPASLISKEVYDFILL 124 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 + RL+ EI KTLERSYLL++ ++ERPQH+LMRVS+GIH DDID A Sbjct: 125 HKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHIDDIDKA 184 Query: 430 IRTYHLMSQRWFTHASPT 483 + TYHLMSQ++FTHA+PT Sbjct: 185 LETYHLMSQKYFTHATPT 202
>RIR1_CRYPV (O61065) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 803 Score = 136 bits (343), Expect = 3e-32 Identities = 66/138 (47%), Positives = 94/138 (68%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 + A+H D++ LAARI+ SNLHKNT + +Y ++ + G +PLI++ +Y+ IM+ Sbjct: 66 MAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLY-NFKDNQGCPAPLISKPVYDFIME 124 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDSA 429 N R++S+I KTLERSYLLK+ VVERPQH+LMRVS GIH DI++A Sbjct: 125 NRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHCGDIEAA 184 Query: 430 IRTYHLMSQRWFTHASPT 483 + TY L+SQ++FTHA+PT Sbjct: 185 LETYELLSQKYFTHATPT 202
>RIR1_TRYBB (O15909) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase R1 subunit) Length = 838 Score = 106 bits (265), Expect = 3e-23 Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 5/139 (3%) Frame = +1 Query: 82 HPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKNAAR 261 HPDY LA R+AV+ LHK T +S ++ + ++ H ++ + +PLI+E+++++ K++A Sbjct: 76 HPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWDIANKHSAA 135 Query: 262 LDSEIIXXXXXXXXXXXXKTLERSYLLKL---GGV--VVERPQHMLMRVSVGIHKDDIDS 426 L I KTLERSYLL++ GV VVERPQ M +RV++GIH +D++ Sbjct: 136 LQQIINYERDFDFEYFGYKTLERSYLLRVHKGRGVMEVVERPQQMFLRVALGIHGEDLER 195 Query: 427 AIRTYHLMSQRWFTHASPT 483 TY MSQ +FTHA+PT Sbjct: 196 VKETYDYMSQGFFTHATPT 214
>RIR1_MIMIV (Q7T6Y8) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 881 Score = 99.8 bits (247), Expect = 3e-21 Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 2/140 (1%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMK 249 + H DY +A I ++NLH NT F ET + +Y + +E S +P+I+E+IY I K Sbjct: 135 MVTDHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSE-SNKNAPIISENIYNFIKK 193 Query: 250 NAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIH--KDDID 423 + ++ I +TLE+SYL ++ +VERPQH+ MRV++ +H K+D+D Sbjct: 194 HIKEINRVIRYDRDYNLTIFGFRTLEKSYLKRINKKIVERPQHLFMRVAITLHYRKNDLD 253 Query: 424 SAIRTYHLMSQRWFTHASPT 483 TY +S+ +FTHA+PT Sbjct: 254 RIFETYKYLSKGYFTHATPT 273
>RIR1_ENCCU (Q8SR37) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 768 Score = 93.6 bits (231), Expect = 3e-19 Identities = 47/139 (33%), Positives = 79/139 (56%) Frame = +1 Query: 67 ALTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIM 246 ++ HP+Y +++RI VS +H+ T SF E IK + H +++E++Y +I+ Sbjct: 68 SMITKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKHRG--------MVSEEMYGIIL 119 Query: 247 KNAARLDSEIIXXXXXXXXXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDIDS 426 ++ ++ I TL +SYL+K+G ++ERPQ M MRV++ IHK D + Sbjct: 120 EHGETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEK 179 Query: 427 AIRTYHLMSQRWFTHASPT 483 Y+L+S +FTHA+PT Sbjct: 180 VREVYNLLSGHYFTHATPT 198
>RIR1_ASFB7 (P42491) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 778 Score = 77.0 bits (188), Expect = 2e-14 Identities = 54/144 (37%), Positives = 78/144 (54%), Gaps = 5/144 (3%) Frame = +1 Query: 67 ALTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIM 246 ALT H DY++LAAR++V LH++T SFS+ ++ L + LSP +V+ Sbjct: 43 ALTILHYDYSTLAARLSVYQLHQSTASSFSKAVR---LQAAQSCSRLSP----QFVDVVY 95 Query: 247 KNAARLDSEIIXXXXXXXXXXXXKTLERSYLLK-LGGVVVERPQHMLMRVSVGIH----K 411 K A DS I +T++ SYLLK GV++ERPQ MRV++ I+ Sbjct: 96 KYKAIFDSYIDYNRDYKLSLLGIETMKNSYLLKNKDGVIMERPQDAYMRVAIMIYGMGKV 155 Query: 412 DDIDSAIRTYHLMSQRWFTHASPT 483 +I + TY L+S+ THASPT Sbjct: 156 VNIKMILLTYDLLSRHVITHASPT 179
>RIR1_ASFM2 (P26685) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 779 Score = 73.9 bits (180), Expect = 2e-13 Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 5/144 (3%) Frame = +1 Query: 67 ALTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIM 246 ALT H DY++LAAR++V LH++T SFS+ + R ++ +V+ Sbjct: 44 ALTILHYDYSTLAARLSVYLLHQSTASSFSKAVSLQAAQSCSR-------LSSHFVDVVY 96 Query: 247 KNAARLDSEIIXXXXXXXXXXXXKTLERSYLLK-LGGVVVERPQHMLMRVSVGIH----K 411 K A DS I +T++ SYLLK GV++ERPQ MRV++ IH Sbjct: 97 KYKAIFDSYIDYSRDYKLSLLGIETMKNSYLLKNKDGVIMERPQDAYMRVAIMIHGMGRV 156 Query: 412 DDIDSAIRTYHLMSQRWFTHASPT 483 ++ + TY L+S+ THASPT Sbjct: 157 VNMKMILLTYDLLSRHVITHASPT 180
>RIR1_BPT4 (P32282) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) (B1 protein) Length = 754 Score = 38.5 bits (88), Expect = 0.010 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 10/148 (6%) Frame = +1 Query: 67 ALTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIM 246 +++ PDY +AAR + L K+ + ++ Y +G P E++ Sbjct: 67 SISVEEPDYQYVAARCLMFALRKHVYGQYEPRSFIDHISYCVNAGKYDP-------ELLS 119 Query: 247 KNAAR----LDSEIIXXXXXXXXXXXXKTLERSYLL--KLGGVVVERPQHMLMRVSVGIH 408 K +A L+S+I L+ YL+ K G + E PQ M + + +H Sbjct: 120 KYSAEEITFLESKIKHERDMEFTYSGAMQLKEKYLVKDKTTGQIYETPQFAFMTIGMALH 179 Query: 409 KDD----IDSAIRTYHLMSQRWFTHASP 480 +D+ + IR Y +S R + +P Sbjct: 180 QDEPVDRLKHVIRFYEAVSTRQISLPTP 207
>RIR1_AQUAE (O66503) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 801 Score = 34.3 bits (77), Expect = 0.18 Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 17/155 (10%) Frame = +1 Query: 70 LTASHPDYASLAARIAVSNLHKNTKKSFSETIKD---MYLHYNERS--GLLSPLIAEDIY 234 ++A PD+ AAR+ + +L+K+ +++D Y YN ++ + + + IY Sbjct: 67 VSAERPDWTYTAARLLLYDLYKDVAHLRGYSLRDDLGKYKPYNRKNFYSFVKEYVEKGIY 126 Query: 235 -EVIMKNAA-----RLDSEIIXXXXXXXXXXXXKTLERSYLLK-LGGVVVERPQHMLMRV 393 E +++N + +L + I K L YL++ G V+E PQ M M + Sbjct: 127 GEYLLENYSEEDFNKLANYIKPERDLYFTYTGIKILYDRYLVRDEEGRVIELPQEMYMLI 186 Query: 394 SVGI-----HKDDIDSAIRTYHLMSQRWFTHASPT 483 ++ + ++ + A + Y ++S+ T A+PT Sbjct: 187 AMTLAVPEKPEERLKWAKKFYDVLSEHKVTVATPT 221
>RIR1_CHLTR (O84834) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1047 Score = 33.5 bits (75), Expect = 0.31 Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 11/144 (7%) Frame = +1 Query: 85 PDYASLAARIAVSNLHKNT--KKSFSETIKDMYLHYNERSGLLSPLIAE-DIYEVIMKNA 255 PDYA +AA + + ++K K ++E ++ + + +R IAE D Y + + Sbjct: 307 PDYAFVAAELLLDVVYKEALGKSKYAEDLEQAHRDHFKR------YIAEGDTYRLNAELK 360 Query: 256 ARLDSEIIXXXXXXX-----XXXXXKTLERSYLLKLGGVVVERPQHMLMRVSVGIHKDDI 420 D + + + L Y G +E PQ MRV++G+ ++ Sbjct: 361 HLFDLDALADAMDLSRDLQFSYMGIQNLYDRYFNHHEGCRLETPQIFWMRVAMGLALNEQ 420 Query: 421 DS---AIRTYHLMSQRWFTHASPT 483 D AI Y+L+S +T A+PT Sbjct: 421 DKTSWAITFYNLLSTFRYTPATPT 444
>RIR1_SALTY (P37426) Ribonucleoside-diphosphate reductase 1 alpha subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase 1 R1 subunit) (Ribonucleotide reductase 1) (B1 protein) Length = 761 Score = 31.6 bits (70), Expect = 1.2 Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 2/106 (1%) Frame = +1 Query: 85 PDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKNAARL 264 PDY LAAR+A+ +L K F ++ G + ED E K ++ Sbjct: 75 PDYQYLAARLAIFHLRKKAFGQFEPPALYHHVVKMVELGKYDNHLLEDYTEEEFK---QM 131 Query: 265 DSEIIXXXXXXXXXXXXKTLERSYLL--KLGGVVVERPQHMLMRVS 396 DS I+ K LE YL+ ++ G + E Q + + V+ Sbjct: 132 DSFIVHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177
>FLGK_BUCAI (P57428) Flagellar hook-associated protein 1 (HAP1)| Length = 543 Score = 31.2 bits (69), Expect = 1.5 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +1 Query: 79 SHPDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNE 192 +HP+ +L R+ + N +N K+ + +K++Y +YN+ Sbjct: 27 NHPNNKTLGKRVVIENTVQNENKNSTVKVKEIYDNYND 64
>EPMIP_MOUSE (Q8VEH5) EPM2A-interacting protein 1 (Laforin-interacting protein)| Length = 606 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +1 Query: 85 PDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEV 240 P+YA ++ R+ ++ L NT +KD+ Y SG P+I Y+V Sbjct: 497 PEYAPISVRVELTKLQANTDLWNEYRVKDLGQFYAGLSGEAYPIIKGVAYKV 548
>RIR1_ECOLI (P00452) Ribonucleoside-diphosphate reductase 1 alpha subunit (EC| 1.17.4.1) (Ribonucleoside-diphosphate reductase 1 R1 subunit) (Ribonucleotide reductase 1) (B1 protein) Length = 761 Score = 28.5 bits (62), Expect = 9.9 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 2/106 (1%) Frame = +1 Query: 85 PDYASLAARIAVSNLHKNTKKSFSETIKDMYLHYNERSGLLSPLIAEDIYEVIMKNAARL 264 PDY LAAR+A+ +L K F ++ G + ED E K ++ Sbjct: 75 PDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFK---QM 131 Query: 265 DSEIIXXXXXXXXXXXXKTLERSYLL--KLGGVVVERPQHMLMRVS 396 D+ I K LE YL+ ++ G + E Q + + V+ Sbjct: 132 DTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVA 177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,593,396 Number of Sequences: 219361 Number of extensions: 827580 Number of successful extensions: 2738 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 2690 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2725 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
