ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LIFO_CHRVO (Q7NUI5) Lipase chaperone (Lipase foldase) (Lipase he... 35 0.059
2SSH3_MOUSE (Q8K330) Protein phosphatase Slingshot homolog 3 (EC ... 30 2.5

>LIFO_CHRVO (Q7NUI5) Lipase chaperone (Lipase foldase) (Lipase helper protein)|
           (Lipase activator protein) (Lipase modulator)
          Length = 303

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 99  ASQERAASRAALPNQEHRARRGGGSS---YELRAAATGEVASCCLGEEEEE 242
           A++E      AL + E R R+GGG     Y+LRA   G+ A+  LGE + E
Sbjct: 198 AAREEPVKHLALADAEARLRQGGGGEQQLYQLRAGMVGQAAADRLGELDRE 248



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>SSH3_MOUSE (Q8K330) Protein phosphatase Slingshot homolog 3 (EC 3.1.3.48) (EC|
           3.1.3.16) (SSH-3L) (mSSH-3L)
          Length = 649

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +2

Query: 107 GAGREQSCITEPGAPSTPRRRQQLRAKSSSDWR 205
           G G+EQS   EPG  STPR R+ +R  S  D R
Sbjct: 615 GQGQEQS---EPGMSSTPRLRKVMRQASVDDSR 644


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,437,058
Number of Sequences: 219361
Number of extensions: 359647
Number of successful extensions: 1381
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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