ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl56h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ200373.1| Solanum tuberosum clone 059F05 pre-mRNA splicing ... 44 0.37
2gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome ... 42 1.5
3gb|BC037107.1| Mus musculus adenylate cyclase 2, mRNA (cDNA clon... 42 1.5
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
5emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome 42 1.5
6gb|AC145330.19| Medicago truncatula clone mth2-17l1, complete se... 42 1.5
7emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chro... 42 1.5
8gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
9dbj|AK132312.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 1.5
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
11gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosom... 42 1.5
12gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
13gb|U05773.1|PRU05773 Plasmid RK2 kilC operon, (klcA) gene, compl... 42 1.5
14dbj|AK122432.1| Mus musculus mRNA for mKIAA1060 protein 42 1.5
15ref|NM_153534.1| Mus musculus adenylate cyclase 2 (Adcy2), mRNA 42 1.5
16gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
17dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 1.5
18gb|L13392.1|ECOKILCX Escherichia coli kilC gene, complete cds 42 1.5
19gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, R... 42 1.5
20ref|XM_479709.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
21ref|XM_475113.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
22ref|NM_189348.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
23gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
24gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's ... 40 5.8
25ref|XM_591335.2| PREDICTED: Bos taurus similar to signal-induced... 40 5.8
26gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
27ref|XM_862853.1| PREDICTED: Canis familiaris similar to desmin, ... 40 5.8
28ref|XM_543852.2| PREDICTED: Canis familiaris similar to desmin, ... 40 5.8
29emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 40 5.8
30emb|CR354539.13| Zebrafish DNA sequence from clone CH211-250O1 i... 40 5.8
31dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, compl... 40 5.8
32ref|NM_031779.1| Rattus norvegicus amyloid beta (A4) precursor p... 40 5.8
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
36dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37gb|AF029105.1|AF029105 Rattus norvegicus Mint1 mRNA, complete cds 40 5.8
38dbj|AB084235.1| Terrabacter sp. DBF63 ISTesp2 and phthalate cata... 40 5.8
39dbj|AB054975.1| Terrabacter sp. DBF63 DNA, angular dioxygenase r... 40 5.8
40dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
41dbj|AK100947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
42dbj|AK070902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
43gb|AF068845.1|AF068845 Mycobacteriophage TM4, complete genome 40 5.8
44gb|BC070005.1| Danio rerio tumor protein p53 binding protein, 2,... 40 5.8
45ref|NM_214814.1| Danio rerio tumor protein p53 binding protein, ... 40 5.8 
>gb|DQ200373.1| Solanum tuberosum clone 059F05 pre-mRNA splicing factor-like
           protein mRNA, complete cds
          Length = 1257

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 310 ggaggtggaggtggagggcgtc 331
           ||||||||||||||||||||||
Sbjct: 409 ggaggtggaggtggagggcgtc 430
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>gb|AC160995.4| Mus musculus BAC clone RP23-96D5 from chromosome 13, complete sequence
          Length = 235237

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   cgccgaggcggcggcagcagc 176
             |||||||||||||||||||||
Sbjct: 80615 cgccgaggcggcggcagcagc 80595
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>gb|BC037107.1| Mus musculus adenylate cyclase 2, mRNA (cDNA clone MGC:47193
           IMAGE:5367175), complete cds
          Length = 3980

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 cgccgaggcggcggcagcagc 176
           |||||||||||||||||||||
Sbjct: 48  cgccgaggcggcggcagcagc 68
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 5       taacaaaaagcacccgcacctccat 29
               |||||||||||||||| ||||||||
Sbjct: 7710548 taacaaaaagcacccggacctccat 7710572
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>emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome
          Length = 68869

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 150  cgagcacgccgaggcggcggc 170
            |||||||||||||||||||||
Sbjct: 1771 cgagcacgccgaggcggcggc 1751
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>gb|AC145330.19| Medicago truncatula clone mth2-17l1, complete sequence
          Length = 136161

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   aaaaggaggtggaggtggagg 326
             |||||||||||||||||||||
Sbjct: 38974 aaaaggaggtggaggtggagg 38994
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>emb|AL603649.9| Human DNA sequence from clone RP11-326N3 on chromosome 9 Contains part
             of the CRSP8 gene for subunit 8 of a cofactor required for
             Sp1 transcriptional activation and a CpG island, complete
             sequence
          Length = 77621

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   aaaaggaggtggaggtggagg 326
             |||||||||||||||||||||
Sbjct: 36034 aaaaggaggtggaggtggagg 36054
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    taacaaaaagcacccgcacctccat 29
            |||||||||||||||| ||||||||
Sbjct: 4742 taacaaaaagcacccggacctccat 4718
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>dbj|AK132312.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4022405K23 product:adenylate cyclase 2,
           full insert sequence
          Length = 4193

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 cgccgaggcggcggcagcagc 176
           |||||||||||||||||||||
Sbjct: 292 cgccgaggcggcggcagcagc 312
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 5       taacaaaaagcacccgcacctccat 29
               |||||||||||||||| ||||||||
Sbjct: 7708383 taacaaaaagcacccggacctccat 7708407
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>gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosome 13, complete
            sequence
          Length = 214193

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 156  cgccgaggcggcggcagcagc 176
            |||||||||||||||||||||
Sbjct: 8056 cgccgaggcggcggcagcagc 8076
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 313     ggtggaggtggagggcgtccagcgc 337
               |||||||| ||||||||||||||||
Sbjct: 3630716 ggtggaggcggagggcgtccagcgc 3630740
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>gb|U05773.1|PRU05773 Plasmid RK2 kilC operon, (klcA) gene, complete cds, and (klcB)
           gene,  partial cds
          Length = 1800

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 150 cgagcacgccgaggcggcggc 170
           |||||||||||||||||||||
Sbjct: 960 cgagcacgccgaggcggcggc 980
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>dbj|AK122432.1| Mus musculus mRNA for mKIAA1060 protein
          Length = 4020

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 cgccgaggcggcggcagcagc 176
           |||||||||||||||||||||
Sbjct: 106 cgccgaggcggcggcagcagc 126
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>ref|NM_153534.1| Mus musculus adenylate cyclase 2 (Adcy2), mRNA
          Length = 3980

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 cgccgaggcggcggcagcagc 176
           |||||||||||||||||||||
Sbjct: 48  cgccgaggcggcggcagcagc 68
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>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0078P24, from chromosome 3, complete sequence
          Length = 146930

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 5      taacaaaaagcacccgcacctccat 29
              |||||||||||||||| ||||||||
Sbjct: 142246 taacaaaaagcacccggacctccat 142222
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>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541,
             complete sequence
          Length = 110985

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   aaaaggaggtggaggtggagg 326
             |||||||||||||||||||||
Sbjct: 86104 aaaaggaggtggaggtggagg 86084
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>gb|L13392.1|ECOKILCX Escherichia coli kilC gene, complete cds
          Length = 1750

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 150 cgagcacgccgaggcggcggc 170
           |||||||||||||||||||||
Sbjct: 958 cgagcacgccgaggcggcggc 978
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>gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, RK2, RP1, RP4) complete genome
          Length = 60099

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   cgagcacgccgaggcggcggc 170
             |||||||||||||||||||||
Sbjct: 11240 cgagcacgccgaggcggcggc 11220
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>ref|XM_479709.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2681

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 gccgaggcggcggcagcagc 176
           ||||||||||||||||||||
Sbjct: 439 gccgaggcggcggcagcagc 420
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>ref|XM_475113.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  ggcggcggcgaggtccgggg 304
            ||||||||||||||||||||
Sbjct: 1356 ggcggcggcgaggtccgggg 1337
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>ref|NM_189348.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2358

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 309 aggaggtggaggtggagggcgtccagcg 336
           ||||||||||||| || |||||||||||
Sbjct: 53  aggaggtggaggtagaaggcgtccagcg 26
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>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12,
             complete sequence
          Length = 164064

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ggcggcggcgaggtccgggg 304
             ||||||||||||||||||||
Sbjct: 39487 ggcggcggcgaggtccgggg 39468
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>gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 209228

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    aaaggaggtggaggtggagg 326
              ||||||||||||||||||||
Sbjct: 138590 aaaggaggtggaggtggagg 138609
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>ref|XM_591335.2| PREDICTED: Bos taurus similar to signal-induced
            proliferation-associated 1 like 3 (LOC513625), mRNA
          Length = 5895

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 282  gggggcggcggcgaggtccg 301
            ||||||||||||||||||||
Sbjct: 1144 gggggcggcggcgaggtccg 1163
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>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10,
             complete sequence
          Length = 148373

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ggcggcggcgaggtccgggg 304
             ||||||||||||||||||||
Sbjct: 88719 ggcggcggcgaggtccgggg 88700
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>ref|XM_862853.1| PREDICTED: Canis familiaris similar to desmin, transcript variant 4
           (LOC486725), mRNA
          Length = 2021

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ggaggtggaggtggagggcg 329
           ||||||||||||||||||||
Sbjct: 594 ggaggtggaggtggagggcg 575
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>ref|XM_543852.2| PREDICTED: Canis familiaris similar to desmin, transcript variant 1
           (LOC486725), mRNA
          Length = 2027

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 310 ggaggtggaggtggagggcg 329
           ||||||||||||||||||||
Sbjct: 594 ggaggtggaggtggagggcg 575
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   gggggcggcggcgaggtccg 301
             ||||||||||||||||||||
Sbjct: 41112 gggggcggcggcgaggtccg 41093
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>emb|CR354539.13| Zebrafish DNA sequence from clone CH211-250O1 in linkage group 13,
              complete sequence
          Length = 145294

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    aggaggtggaggtggagggc 328
              ||||||||||||||||||||
Sbjct: 144597 aggaggtggaggtggagggc 144616
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>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds
          Length = 70631

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cgccgaggcggcggcagcag 175
             ||||||||||||||||||||
Sbjct: 42620 cgccgaggcggcggcagcag 42639
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>ref|NM_031779.1| Rattus norvegicus amyloid beta (A4) precursor protein-binding,
           family A, member 1 (Apba1), mRNA
          Length = 3901

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 ccgagcacgccgaggcggcg 168
           ||||||||||||||||||||
Sbjct: 968 ccgagcacgccgaggcggcg 987
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    gccgaggcggcggcagcagc 176
              ||||||||||||||||||||
Sbjct: 377202 gccgaggcggcggcagcagc 377221
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      ggcggcggcgaggtccgggg 304
                ||||||||||||||||||||
Sbjct: 17095352 ggcggcggcgaggtccgggg 17095333
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 309      aggaggtggaggtggagggcgtccagcg 336
                ||||||||||||| || |||||||||||
Sbjct: 42289669 aggaggtggaggtagaaggcgtccagcg 42289642
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0401G10
          Length = 160704

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 309   aggaggtggaggtggagggcgtccagcg 336
             ||||||||||||| || |||||||||||
Sbjct: 61626 aggaggtggaggtagaaggcgtccagcg 61599
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>gb|AF029105.1|AF029105 Rattus norvegicus Mint1 mRNA, complete cds
          Length = 3901

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 ccgagcacgccgaggcggcg 168
           ||||||||||||||||||||
Sbjct: 968 ccgagcacgccgaggcggcg 987
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>dbj|AB084235.1| Terrabacter sp. DBF63 ISTesp2 and phthalate catabolic gene cluster
            (phtA1, phtA2, ORF11, phtB, phtA3, phtA4, phtC, phtR),
            complete cds
          Length = 8684

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  cgccgaggcggcggcagcag 175
            ||||||||||||||||||||
Sbjct: 6069 cgccgaggcggcggcagcag 6088
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>dbj|AB054975.1| Terrabacter sp. DBF63 DNA, angular dioxygenase region
          Length = 8179

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 cgccgaggcggcggcagcag 175
           ||||||||||||||||||||
Sbjct: 193 cgccgaggcggcggcagcag 212
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>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   gccgaggcggcggcagcagc 176
             ||||||||||||||||||||
Sbjct: 86716 gccgaggcggcggcagcagc 86735
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>dbj|AK100947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138H21, full
            insert sequence
          Length = 1963

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  ggcggcggcgaggtccgggg 304
            ||||||||||||||||||||
Sbjct: 1468 ggcggcggcgaggtccgggg 1449
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>dbj|AK070902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069E09, full
           insert sequence
          Length = 2681

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 gccgaggcggcggcagcagc 176
           ||||||||||||||||||||
Sbjct: 439 gccgaggcggcggcagcagc 420
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>gb|AF068845.1|AF068845 Mycobacteriophage TM4, complete genome
          Length = 52797

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   gcacgccgaggcggcggcag 172
             ||||||||||||||||||||
Sbjct: 24322 gcacgccgaggcggcggcag 24303
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>gb|BC070005.1| Danio rerio tumor protein p53 binding protein, 2, mRNA (cDNA clone
            MGC:85720 IMAGE:6967163), complete cds
          Length = 4855

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  aggaggtggaggtggagggc 328
            ||||||||||||||||||||
Sbjct: 2642 aggaggtggaggtggagggc 2623
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>ref|NM_214814.1| Danio rerio tumor protein p53 binding protein, 2 (tp53bp2), mRNA
          Length = 4855

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  aggaggtggaggtggagggc 328
            ||||||||||||||||||||
Sbjct: 2642 aggaggtggaggtggagggc 2623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,085,316
Number of Sequences: 3902068
Number of extensions: 3085316
Number of successful extensions: 80780
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80142
Number of HSP's gapped (non-prelim): 638
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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